Click here to switch to the map view.

The map label for this gene is atpE

Identifier: 23100435

GI number: 23100435

Start: 3090499

End: 3090705

Strand: Reverse

Name: atpE

Synonym: OB2980

Alternate gene names: 23100435

Gene position: 3090705-3090499 (Counterclockwise)

Preceding gene: 23100436

Following gene: 23100434

Centisome position: 85.13

GC content: 43.48

Gene sequence:

>207_bases
ATGGGAGCTTTAGCAGCAGCAATAGCAATCGGTTTAGCAGCATTAGGAGCAGGTCTTGGTAACGGTATGATCGTAAGTAA
AACAGTAGAAGGTATTGCACGTCAACCAGAATTACGTGGTGCATTACAAGGTACAATGTTTATCGGGGTAGCACTTGTAG
AGGCGATTCCAATCATCGCAGCAGTTATCGCGTTTATGGTAATGTAA

Upstream 100 bases:

>100_bases
ATTCGTAATGTTAACAATGGTTTATATGTCTCACAAAGTGAGCAGTGACCATTAATAAAAAATAATTTATTAGGTTTATT
ATAAAAGGAGGAAATTATCA

Downstream 100 bases:

>100_bases
ATCGCAATTTTTCCTAGAATTATAATGGCGAAGTTCAGTAACAAAGAATCTTCGCCATTCCTTTATGCAAGAGTAACGAT
GTAGAATTTTATACATCAGA

Product: F0F1 ATP synthase subunit C

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit c; F-type ATPase subunit c; F-ATPase subunit c; Lipid-binding protein

Number of amino acids: Translated: 68; Mature: 67

Protein sequence:

>68_residues
MGALAAAIAIGLAALGAGLGNGMIVSKTVEGIARQPELRGALQGTMFIGVALVEAIPIIAAVIAFMVM

Sequences:

>Translated_68_residues
MGALAAAIAIGLAALGAGLGNGMIVSKTVEGIARQPELRGALQGTMFIGVALVEAIPIIAAVIAFMVM
>Mature_67_residues
GALAAAIAIGLAALGAGLGNGMIVSKTVEGIARQPELRGALQGTMFIGVALVEAIPIIAAVIAFMVM

Specific function: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits

COG id: COG0636

COG function: function code C; F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase C chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPL_OCEIH (Q8EM78)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_693902.1
- HSSP:   P00845
- ProteinModelPortal:   Q8EM78
- SMR:   Q8EM78
- GeneID:   1016736
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB2980
- NMPDR:   fig|221109.1.peg.2983
- OMA:   VEGVSRN
- ProtClustDB:   PRK06876
- BioCyc:   OIHE221109:OB2980-MONOMER
- HAMAP:   MF_01396
- InterPro:   IPR000454
- InterPro:   IPR005953
- InterPro:   IPR020537
- InterPro:   IPR002379
- Gene3D:   G3DSA:1.20.20.10
- PRINTS:   PR00124
- TIGRFAMs:   TIGR01260

Pfam domain/function: PF00137 ATP-synt_C; SSF81333 ATPase_F0/V0_c

EC number: 3.6.3.14

Molecular weight: Translated: 6692; Mature: 6561

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS00605 ATPASE_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x111657c0)-; HASH(0x11880b94)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGALAAAIAIGLAALGAGLGNGMIVSKTVEGIARQPELRGALQGTMFIGVALVEAIPIIA
CCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVIAFMVM
HHHHHHHH
>Mature Secondary Structure 
GALAAAIAIGLAALGAGLGNGMIVSKTVEGIARQPELRGALQGTMFIGVALVEAIPIIA
CHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVIAFMVM
HHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12235376