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The map label for this gene is liaF [H]

Identifier: 23100279

GI number: 23100279

Start: 2903637

End: 2904365

Strand: Reverse

Name: liaF [H]

Synonym: OB2824

Alternate gene names: 23100279

Gene position: 2904365-2903637 (Counterclockwise)

Preceding gene: 23100280

Following gene: 23100278

Centisome position: 80.0

GC content: 36.49

Gene sequence:

>729_bases
ATGTTCAAACAACTCAGCACGAAATATTTTAACTGGATATTGATCATCGGGGCAATTCTTCTTGTTTTTGAAATTATATT
CTTCCACGGTGGATCTTTGTTCTCCGCATTGATTGCTGGGTTCTTTGTGTATTTTAGTTGGAAAAGGTTGCACAGCTTAT
GGTGGAAAATTGTATTTGCGATTTCTTTAATTAGTTTCACCTTTTCATTTTTTAACTTATTGGCAATACGTTTCTTCATT
GTCGCTGCGATTGTCTTTTTCATTTTGAACTATATTAAATCAACTCAAGAACCAAGTCAGGAAACACCGGAATTTCCAGA
AAAAGACTACGAGTGTGAAACCATGACCCATGTAGAACCTTTATTTGACGAACGTTTTTTTGATGATTACCGGACAGAAG
AAACGGCTTATCAATGGAAAGACGTCAACATGCATGGTATATACGGTGATCGCATCATTGATTTAAGTAATACCGTGCTA
CCGAATGATACAGCGGTAATCTCTATCCGCCACCTCATCGGTAATATTGAAATTTATGTTCCTTATGAAGTTGAGGTCAG
TATCCATCATAGTTCTGTTTTTGGTAGGGCTACAATACTTGGGGAGTATCATCAACGACTAATGAATAAATCGATTCATT
ATGAAACCGAATCCTATAGTACAACGTATCCAAGAGTGAAAATCATTACCTCAATATTTTCTGGAGACATTGAGGTGAAA
CGCGTATGA

Upstream 100 bases:

>100_bases
AGGTAGATAAGCAACTCTCATGGTATACTAATACAGGCGTATTATCTTTGCGTCTGTATTAGTTACATACATAATGAAAC
AAAAGAAAGGAGAATGGCAG

Downstream 100 bases:

>100_bases
ATACCATTATTCGATATGTTCTCTTGTCAATTACCTGTAGTTTTGTCTTAGGGATTACATTTGTCGTCATGACTTTTCTT
ACCTTTTCTTTAAATGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MFKQLSTKYFNWILIIGAILLVFEIIFFHGGSLFSALIAGFFVYFSWKRLHSLWWKIVFAISLISFTFSFFNLLAIRFFI
VAAIVFFILNYIKSTQEPSQETPEFPEKDYECETMTHVEPLFDERFFDDYRTEETAYQWKDVNMHGIYGDRIIDLSNTVL
PNDTAVISIRHLIGNIEIYVPYEVEVSIHHSSVFGRATILGEYHQRLMNKSIHYETESYSTTYPRVKIITSIFSGDIEVK
RV

Sequences:

>Translated_242_residues
MFKQLSTKYFNWILIIGAILLVFEIIFFHGGSLFSALIAGFFVYFSWKRLHSLWWKIVFAISLISFTFSFFNLLAIRFFI
VAAIVFFILNYIKSTQEPSQETPEFPEKDYECETMTHVEPLFDERFFDDYRTEETAYQWKDVNMHGIYGDRIIDLSNTVL
PNDTAVISIRHLIGNIEIYVPYEVEVSIHHSSVFGRATILGEYHQRLMNKSIHYETESYSTTYPRVKIITSIFSGDIEVK
RV
>Mature_242_residues
MFKQLSTKYFNWILIIGAILLVFEIIFFHGGSLFSALIAGFFVYFSWKRLHSLWWKIVFAISLISFTFSFFNLLAIRFFI
VAAIVFFILNYIKSTQEPSQETPEFPEKDYECETMTHVEPLFDERFFDDYRTEETAYQWKDVNMHGIYGDRIIDLSNTVL
PNDTAVISIRHLIGNIEIYVPYEVEVSIHHSSVFGRATILGEYHQRLMNKSIHYETESYSTTYPRVKIITSIFSGDIEVK
RV

Specific function: Unknown

COG id: COG4758

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016975 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28459; Mature: 28459

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKQLSTKYFNWILIIGAILLVFEIIFFHGGSLFSALIAGFFVYFSWKRLHSLWWKIVFA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLISFTFSFFNLLAIRFFIVAAIVFFILNYIKSTQEPSQETPEFPEKDYECETMTHVEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
LFDERFFDDYRTEETAYQWKDVNMHGIYGDRIIDLSNTVLPNDTAVISIRHLIGNIEIYV
HHHHHHHHHHCCCHHHHHEECCCEECCCCCEEEECCCCCCCCCHHHEEHHHHHCCEEEEE
PYEVEVSIHHSSVFGRATILGEYHQRLMNKSIHYETESYSTTYPRVKIITSIFSGDIEVK
EEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEE
RV
EC
>Mature Secondary Structure
MFKQLSTKYFNWILIIGAILLVFEIIFFHGGSLFSALIAGFFVYFSWKRLHSLWWKIVFA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLISFTFSFFNLLAIRFFIVAAIVFFILNYIKSTQEPSQETPEFPEKDYECETMTHVEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
LFDERFFDDYRTEETAYQWKDVNMHGIYGDRIIDLSNTVLPNDTAVISIRHLIGNIEIYV
HHHHHHHHHHCCCHHHHHEECCCEECCCCCEEEECCCCCCCCCHHHEEHHHHHCCEEEEE
PYEVEVSIHHSSVFGRATILGEYHQRLMNKSIHYETESYSTTYPRVKIITSIFSGDIEVK
EEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEE
RV
EC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377; 12207695 [H]