| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is pgk
Identifier: 23099892
GI number: 23099892
Start: 2492179
End: 2493360
Strand: Reverse
Name: pgk
Synonym: OB2437
Alternate gene names: 23099892
Gene position: 2493360-2492179 (Counterclockwise)
Preceding gene: 23099893
Following gene: 23099891
Centisome position: 68.68
GC content: 38.49
Gene sequence:
>1182_bases TTGAACAAAAAAACAATTAACGATCTACAAGTTGAAGGAAAGCGAGTATTTACACGCGTAGACTTTAATGTTCCTTTAAA AGATGGTGAGATTACAGATGATACACGTATTCGCGCCGCACTACCGACAATTGAACAATTAACAGCACAAGGTGCAAAAG TGATTTTAGCTAGTCATCTAGGACGACCTAAAGGAACAGTTGTAGAAGAACTACGTTTAGACCCTGTTGCTGATAGACTT AGTGATCTATTAGGTAAAGAAGTATTGAAAACAGATCAAGTTTATGGTGAAGAAGTTGATCAGGCTATCAGTGAGCTAGA AAACGGTGGAGTTCTTTTAATAGAGAACGTTCGCTTTGAAGCTGGAGAAGAAAAAAATGATCCTGAATTAGTGGAAGCAT TCGCTAACATGGCTGACCTTTATGTCAATGATGCTTTTGGTGCTGCTCATCGTGCACATGCATCTACAACTGGCGTAGCA GAGAAATTACCAGCAGCTGCAGGTAAATTAATGGAGAAAGAAATTGAAGCACTAGGCAACGCTCTAGAAAATCCGGAACG ACCGTTTACAGCAATTGTTGGTGGAGCGAAAGTAAAAGATAAAATTAGTGTGATCGATAATCTGTTAGATAAAGTAGATA ATTTGATTATTGGTGGCGGTCTAGCTTACACGTTCATCAAAGCACAAGGTCATGAGATTGGAAAATCACTTCTAGAAGAA GATAAAATTGATTTGGCTAAAGAATTTATGAACAAAGCGAAAGAAAAAGGTGTTAACTTTGTATTGCCAGTCGACGCTAT TGTGGCCGATGATTTCTCAGAAGAGGCTAATACCAAAATTGTAGATATAGATAAAATTCCTTCTGACTGGGAAGCGTTAG ATATAGGCACGAAGACAAGAGAAAAATATAGTAGTATCGTGAAAGATTCAAAACTTGTTATATGGAATGGACCAATGGGA GTATTTGAATTAAATGCATTCGCAGGTGGTACAAAAGCTGTAGCAGAAGCATTAGCATCTACAGAAGGCTACTCTATAAT AGGTGGTGGCGATTCTGCGGCAGCTGTTGAAAAGTTCGGCCTTGCAGAAGAAATGGATCATGTATCTACAGGTGGAGGAG CATCATTAGAATTCATGGAAGGAAAAGTTCTTCCTGGACTAGCTGCTCTAAATGATAAATAA
Upstream 100 bases:
>100_bases GTTTTAATCAGTATTGTTTTATATTGACTGCTACGTGGTATAATATTGCTTGGTTATGAATGATTATGTATTACATAATC CAGTATTAGGAGGGATTATC
Downstream 100 bases:
>100_bases TAATAAATAACTAACAGAGGTGATTCGATGCGTAAAAAAGTGATAGCTGGTAACTGGAAAATGAATAAAGTACTATCTGA AGCAGGAGAATTTATGAATT
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MNKKTINDLQVEGKRVFTRVDFNVPLKDGEITDDTRIRAALPTIEQLTAQGAKVILASHLGRPKGTVVEELRLDPVADRL SDLLGKEVLKTDQVYGEEVDQAISELENGGVLLIENVRFEAGEEKNDPELVEAFANMADLYVNDAFGAAHRAHASTTGVA EKLPAAAGKLMEKEIEALGNALENPERPFTAIVGGAKVKDKISVIDNLLDKVDNLIIGGGLAYTFIKAQGHEIGKSLLEE DKIDLAKEFMNKAKEKGVNFVLPVDAIVADDFSEEANTKIVDIDKIPSDWEALDIGTKTREKYSSIVKDSKLVIWNGPMG VFELNAFAGGTKAVAEALASTEGYSIIGGGDSAAAVEKFGLAEEMDHVSTGGGASLEFMEGKVLPGLAALNDK
Sequences:
>Translated_393_residues MNKKTINDLQVEGKRVFTRVDFNVPLKDGEITDDTRIRAALPTIEQLTAQGAKVILASHLGRPKGTVVEELRLDPVADRL SDLLGKEVLKTDQVYGEEVDQAISELENGGVLLIENVRFEAGEEKNDPELVEAFANMADLYVNDAFGAAHRAHASTTGVA EKLPAAAGKLMEKEIEALGNALENPERPFTAIVGGAKVKDKISVIDNLLDKVDNLIIGGGLAYTFIKAQGHEIGKSLLEE DKIDLAKEFMNKAKEKGVNFVLPVDAIVADDFSEEANTKIVDIDKIPSDWEALDIGTKTREKYSSIVKDSKLVIWNGPMG VFELNAFAGGTKAVAEALASTEGYSIIGGGDSAAAVEKFGLAEEMDHVSTGGGASLEFMEGKVLPGLAALNDK >Mature_393_residues MNKKTINDLQVEGKRVFTRVDFNVPLKDGEITDDTRIRAALPTIEQLTAQGAKVILASHLGRPKGTVVEELRLDPVADRL SDLLGKEVLKTDQVYGEEVDQAISELENGGVLLIENVRFEAGEEKNDPELVEAFANMADLYVNDAFGAAHRAHASTTGVA EKLPAAAGKLMEKEIEALGNALENPERPFTAIVGGAKVKDKISVIDNLLDKVDNLIIGGGLAYTFIKAQGHEIGKSLLEE DKIDLAKEFMNKAKEKGVNFVLPVDAIVADDFSEEANTKIVDIDKIPSDWEALDIGTKTREKYSSIVKDSKLVIWNGPMG VFELNAFAGGTKAVAEALASTEGYSIIGGGDSAAAVEKFGLAEEMDHVSTGGGASLEFMEGKVLPGLAALNDK
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family
Homologues:
Organism=Homo sapiens, GI4505763, Length=414, Percent_Identity=48.3091787439614, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI31543397, Length=413, Percent_Identity=46.4891041162228, Blast_Score=352, Evalue=3e-97, Organism=Escherichia coli, GI1789294, Length=395, Percent_Identity=47.3417721518987, Blast_Score=348, Evalue=4e-97, Organism=Caenorhabditis elegans, GI17508823, Length=412, Percent_Identity=47.5728155339806, Blast_Score=358, Evalue=3e-99, Organism=Saccharomyces cerevisiae, GI6319857, Length=413, Percent_Identity=49.1525423728814, Blast_Score=362, Evalue=1e-101, Organism=Drosophila melanogaster, GI24581203, Length=415, Percent_Identity=44.578313253012, Blast_Score=330, Evalue=9e-91, Organism=Drosophila melanogaster, GI17136394, Length=411, Percent_Identity=45.985401459854, Blast_Score=328, Evalue=5e-90,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): PGK_OCEIH (Q8ENP3)
Other databases:
- EMBL: BA000028 - RefSeq: NP_693358.1 - ProteinModelPortal: Q8ENP3 - SMR: Q8ENP3 - GeneID: 1017220 - GenomeReviews: BA000028_GR - KEGG: oih:OB2437 - NMPDR: fig|221109.1.peg.2434 - HOGENOM: HBG453500 - OMA: DCIGDEV - ProtClustDB: PRK00073 - BioCyc: OIHE221109:OB2437-MONOMER - BRENDA: 2.7.2.3 - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_00145 - InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015824 - Gene3D: G3DSA:3.40.50.1270 - Gene3D: G3DSA:3.40.50.1260 - PANTHER: PTHR11406 - PIRSF: PIRSF000724 - PRINTS: PR00477
Pfam domain/function: PF00162 PGK; SSF53748 PGK
EC number: =2.7.2.3
Molecular weight: Translated: 42119; Mature: 42119
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: BINDING 36-36 BINDING 118-118 BINDING 151-151 BINDING 201-201 BINDING 323-323
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKTINDLQVEGKRVFTRVDFNVPLKDGEITDDTRIRAALPTIEQLTAQGAKVILASHL CCCCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHCHHHHHHHCCHHHHHHHHC GRPKGTVVEELRLDPVADRLSDLLGKEVLKTDQVYGEEVDQAISELENGGVLLIENVRFE CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEC AGEEKNDPELVEAFANMADLYVNDAFGAAHRAHASTTGVAEKLPAAAGKLMEKEIEALGN CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ALENPERPFTAIVGGAKVKDKISVIDNLLDKVDNLIIGGGLAYTFIKAQGHEIGKSLLEE HHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCEEECCCCEEEEEECCCHHHHHHHHHH DKIDLAKEFMNKAKEKGVNFVLPVDAIVADDFSEEANTKIVDIDKIPSDWEALDIGTKTR HHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHCCEEEEECCCCCCCCEEECCCHHH EKYSSIVKDSKLVIWNGPMGVFELNAFAGGTKAVAEALASTEGYSIIGGGDSAAAVEKFG HHHHHHHCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHC LAEEMDHVSTGGGASLEFMEGKVLPGLAALNDK CHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCC >Mature Secondary Structure MNKKTINDLQVEGKRVFTRVDFNVPLKDGEITDDTRIRAALPTIEQLTAQGAKVILASHL CCCCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHCHHHHHHHCCHHHHHHHHC GRPKGTVVEELRLDPVADRLSDLLGKEVLKTDQVYGEEVDQAISELENGGVLLIENVRFE CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEC AGEEKNDPELVEAFANMADLYVNDAFGAAHRAHASTTGVAEKLPAAAGKLMEKEIEALGN CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ALENPERPFTAIVGGAKVKDKISVIDNLLDKVDNLIIGGGLAYTFIKAQGHEIGKSLLEE HHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCEEECCCCEEEEEECCCHHHHHHHHHH DKIDLAKEFMNKAKEKGVNFVLPVDAIVADDFSEEANTKIVDIDKIPSDWEALDIGTKTR HHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHCCEEEEECCCCCCCCEEECCCHHH EKYSSIVKDSKLVIWNGPMGVFELNAFAGGTKAVAEALASTEGYSIIGGGDSAAAVEKFG HHHHHHHCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHC LAEEMDHVSTGGGASLEFMEGKVLPGLAALNDK CHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12235376