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The map label for this gene is rsfA [H]

Identifier: 23099473

GI number: 23099473

Start: 2043213

End: 2043647

Strand: Direct

Name: rsfA [H]

Synonym: OB2018

Alternate gene names: 23099473

Gene position: 2043213-2043647 (Clockwise)

Preceding gene: 23099472

Following gene: 23099484

Centisome position: 56.28

GC content: 33.56

Gene sequence:

>435_bases
ATGAAAAAAACTTATAGTACACAGCAACCTTCAACATTCACAACTAGTATAGAAGAAGAAGTAGGAGTAGAACTAACTGA
TTCTTCAAAGCAGGTAACGAACTCTATACCAACTATTAATATAGATTCCGTAATTCAATATTTACGAGAATTAAAAAAAG
ACTATCATGCTTCCAATCAATCAAAATCCGCGTTGGTATCCATAGAACATGAGAATACAGCTCTAAAAACAAAGGTAGAA
GAATTACAGGATAAATTAGCGGATACCGAGAAACAACTAGCTACCATGCAAGAAGATTATCAAACATTTATCCAAATCAT
GGACCGTGCTAGGAAAATGACTGTTTTTAATGATAATGAAAACGGATTTGTTGCGCCAGCTTTCCGAATGGATAAAAATG
GTAATTTAGAACAACTTGCTCATGGTTCCAATTAA

Upstream 100 bases:

>100_bases
TGGGTTTCGTTGGAACGCGGAGGTACGTGTTAAATATGATAATGCAATTGATTTAGCTAAACGACAACGAAAAGAGAAAA
AGAGAGCACTCAGTGCAGGC

Downstream 100 bases:

>100_bases
TTTAATAAATATATAAAGAGAAACTGGATGATTCTTAGTTTCTCTTTTTTTATGTGTAGAAATACACTATACTGGATTTT
ACAAATATGGACTAATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKKTYSTQQPSTFTTSIEEEVGVELTDSSKQVTNSIPTINIDSVIQYLRELKKDYHASNQSKSALVSIEHENTALKTKVE
ELQDKLADTEKQLATMQEDYQTFIQIMDRARKMTVFNDNENGFVAPAFRMDKNGNLEQLAHGSN

Sequences:

>Translated_144_residues
MKKTYSTQQPSTFTTSIEEEVGVELTDSSKQVTNSIPTINIDSVIQYLRELKKDYHASNQSKSALVSIEHENTALKTKVE
ELQDKLADTEKQLATMQEDYQTFIQIMDRARKMTVFNDNENGFVAPAFRMDKNGNLEQLAHGSN
>Mature_144_residues
MKKTYSTQQPSTFTTSIEEEVGVELTDSSKQVTNSIPTINIDSVIQYLRELKKDYHASNQSKSALVSIEHENTALKTKVE
ELQDKLADTEKQLATMQEDYQTFIQIMDRARKMTVFNDNENGFVAPAFRMDKNGNLEQLAHGSN

Specific function: Seems to improve the efficiency of sporulation by fine- tuning the expression of genes in the sigma F regulon, particularly the timing of their expression. Negatively regulates spoIIR and its own synthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Myb-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014243
- InterPro:   IPR017877 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16351; Mature: 16351

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTYSTQQPSTFTTSIEEEVGVELTDSSKQVTNSIPTINIDSVIQYLRELKKDYHASNQ
CCCCCCCCCCCHHHHHHHHHHCCEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
SKSALVSIEHENTALKTKVEELQDKLADTEKQLATMQEDYQTFIQIMDRARKMTVFNDNE
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
NGFVAPAFRMDKNGNLEQLAHGSN
CCEECCEEEECCCCCHHHHCCCCC
>Mature Secondary Structure
MKKTYSTQQPSTFTTSIEEEVGVELTDSSKQVTNSIPTINIDSVIQYLRELKKDYHASNQ
CCCCCCCCCCCHHHHHHHHHHCCEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
SKSALVSIEHENTALKTKVEELQDKLADTEKQLATMQEDYQTFIQIMDRARKMTVFNDNE
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
NGFVAPAFRMDKNGNLEQLAHGSN
CCEECCEEEECCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377; 10629188 [H]