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The map label for this gene is spoIIAA [H]

Identifier: 23099296

GI number: 23099296

Start: 1873125

End: 1873478

Strand: Reverse

Name: spoIIAA [H]

Synonym: OB1841

Alternate gene names: 23099296

Gene position: 1873478-1873125 (Counterclockwise)

Preceding gene: 23099297

Following gene: 23099295

Centisome position: 51.6

GC content: 38.7

Gene sequence:

>354_bases
ATGGCACTTCATTCTGACTTTGATGTTGTAGGGGATGTCCTCATCGTCAGACTTTCTGGGGAATTGGACCATCATGAGAC
GGAGGCTTTAAGAGATATATGGAAGGATATGATATATAACAATCCGATTAAACACGTTATATTAAATTTAGAACAAGTAA
GTTTTATGGATTCTTCTGGTTTGGGAGTAGTACTAGGAAGGTATAAAGAGGTAATACAATTAGGGGGAGAAATGATGGTG
TGTTCCGTCTCTCCTCCAATACAACGGTTATTTGAAATGTCAGGGCTATTTAAAATAGTTCGTAAAGCGGAAAATGAACG
TTATGCATTAGAGGCATTGGGGGTGGCATCATGA

Upstream 100 bases:

>100_bases
AAGTAACTTTTTCACTTCTTTTGTCGACAGGCAGGAATTCGCTTAAGTCTTGAAGAAATTAGCTATCTAAGAAATATTTT
AAAGGGAGGAATCGTGAAAC

Downstream 100 bases:

>100_bases
AAAATGAAATGTCCCTCGCATTTGCAAGTGTCAGTGAAAATGAAGCATTTGCTCGTGTAGCAGTAGCTTCTTTTATAACA
CAGTTAGATCCGACTATGGA

Product: stage II sporulation protein AA protein

Products: NA

Alternate protein names: Stage II sporulation protein AA [H]

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MALHSDFDVVGDVLIVRLSGELDHHETEALRDIWKDMIYNNPIKHVILNLEQVSFMDSSGLGVVLGRYKEVIQLGGEMMV
CSVSPPIQRLFEMSGLFKIVRKAENERYALEALGVAS

Sequences:

>Translated_117_residues
MALHSDFDVVGDVLIVRLSGELDHHETEALRDIWKDMIYNNPIKHVILNLEQVSFMDSSGLGVVLGRYKEVIQLGGEMMV
CSVSPPIQRLFEMSGLFKIVRKAENERYALEALGVAS
>Mature_116_residues
ALHSDFDVVGDVLIVRLSGELDHHETEALRDIWKDMIYNNPIKHVILNLEQVSFMDSSGLGVVLGRYKEVIQLGGEMMVC
SVSPPIQRLFEMSGLFKIVRKAENERYALEALGVAS

Specific function: In the phosphorylated form it could act as an anti-anti- sigma factor that counteracts spoIIAB and thus releases sigma f from inhibition [H]

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003658
- InterPro:   IPR014237
- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 13131; Mature: 13000

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALHSDFDVVGDVLIVRLSGELDHHETEALRDIWKDMIYNNPIKHVILNLEQVSFMDSSG
CCCCCCHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
LGVVLGRYKEVIQLGGEMMVCSVSPPIQRLFEMSGLFKIVRKAENERYALEALGVAS
CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
>Mature Secondary Structure 
ALHSDFDVVGDVLIVRLSGELDHHETEALRDIWKDMIYNNPIKHVILNLEQVSFMDSSG
CCCCCHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
LGVVLGRYKEVIQLGGEMMVCSVSPPIQRLFEMSGLFKIVRKAENERYALEALGVAS
CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8921882 [H]