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The map label for this gene is ypfA [H]

Identifier: 23099258

GI number: 23099258

Start: 1838132

End: 1838797

Strand: Reverse

Name: ypfA [H]

Synonym: OB1803

Alternate gene names: 23099258

Gene position: 1838797-1838132 (Counterclockwise)

Preceding gene: 23099259

Following gene: 23099257

Centisome position: 50.65

GC content: 31.98

Gene sequence:

>666_bases
ATGCTAGAAATAGGTATGAAAATTCAATTAGAAATGAAAAATAGTGATAACAGTAAAACAGATATCTATTTGTGTACAAT
CATTGATGAAACAGAAGATAACTATATTATTAATTATCCTGTACATAAAGAAACATTGAAAACTACATTTTTTAATATTG
GAACTTACTTTTCTGCTGTTTATGTAGGTGAAGATGACGCAATCTATCGCTTTCCAACAAAAATCACATCTAGAAAAAAA
GCGAAAATACCATCTCTATATATTACAAAACCTGAGGTTGAGCAATGGAAGCGAATTCAACGACGGGAGTATGTGCGTGT
GGATGCTTCCATTGATGTTGCGGTTCATAGTGTTTTACATCAATTTGATCCTTTTACTACAACTACACTAGATATTAGTG
GTGGTGGTGTTGCTATCATCACTCCAAAGGAAGTAGAACTTGTGCTTCATACATTGGTTGATATATGGTTGCCTCTTGAA
ATAAAATATCAAAACAAGATCCATCATGCATACGCCCAAGCAGAAATTGTTACTATTCGAGAACTTAATATCAGAAAGAA
TGTAGTTTCGCTTCAATTTCATTCCATTACCCAAAAAGATCGACAAGAAATTATACGTTATTGTTTTGATAAAGAACGTG
AAAAAAGGTTAAAAGAGAGAAATTAA

Upstream 100 bases:

>100_bases
AACATCGGATCATCACCTCTAAAAGGGTGCTTGCTCCTTTGGTCCTATTTTGTCATAATAAGTATAAAGTATTATTTTAA
TATGATGATGGGGGTACTTT

Downstream 100 bases:

>100_bases
TTCGACCATAAAAAATAGAATATGTTATGATTATCATGTAGAAAGATAGCTTGGTAATAGCCAAGTTTTTTATTGTAGGA
GATGAACATGAATGGAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MLEIGMKIQLEMKNSDNSKTDIYLCTIIDETEDNYIINYPVHKETLKTTFFNIGTYFSAVYVGEDDAIYRFPTKITSRKK
AKIPSLYITKPEVEQWKRIQRREYVRVDASIDVAVHSVLHQFDPFTTTTLDISGGGVAIITPKEVELVLHTLVDIWLPLE
IKYQNKIHHAYAQAEIVTIRELNIRKNVVSLQFHSITQKDRQEIIRYCFDKEREKRLKERN

Sequences:

>Translated_221_residues
MLEIGMKIQLEMKNSDNSKTDIYLCTIIDETEDNYIINYPVHKETLKTTFFNIGTYFSAVYVGEDDAIYRFPTKITSRKK
AKIPSLYITKPEVEQWKRIQRREYVRVDASIDVAVHSVLHQFDPFTTTTLDISGGGVAIITPKEVELVLHTLVDIWLPLE
IKYQNKIHHAYAQAEIVTIRELNIRKNVVSLQFHSITQKDRQEIIRYCFDKEREKRLKERN
>Mature_221_residues
MLEIGMKIQLEMKNSDNSKTDIYLCTIIDETEDNYIINYPVHKETLKTTFFNIGTYFSAVYVGEDDAIYRFPTKITSRKK
AKIPSLYITKPEVEQWKRIQRREYVRVDASIDVAVHSVLHQFDPFTTTTLDISGGGVAIITPKEVELVLHTLVDIWLPLE
IKYQNKIHHAYAQAEIVTIRELNIRKNVVSLQFHSITQKDRQEIIRYCFDKEREKRLKERN

Specific function: Unknown

COG id: COG5581

COG function: function code M; Predicted glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PilZ domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009875 [H]

Pfam domain/function: PF07238 PilZ [H]

EC number: NA

Molecular weight: Translated: 25967; Mature: 25967

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEIGMKIQLEMKNSDNSKTDIYLCTIIDETEDNYIINYPVHKETLKTTFFNIGTYFSAV
CEEECEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHCCEEEEE
YVGEDDAIYRFPTKITSRKKAKIPSLYITKPEVEQWKRIQRREYVRVDASIDVAVHSVLH
EECCCCCEEECCCHHCCCCCCCCCEEEEECCCHHHHHHHHHHHEEEECCCHHHHHHHHHH
QFDPFTTTTLDISGGGVAIITPKEVELVLHTLVDIWLPLEIKYQNKIHHAYAQAEIVTIR
HCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHEEEEEEE
ELNIRKNVVSLQFHSITQKDRQEIIRYCFDKEREKRLKERN
EECCCCCEEEEEEHHHCHHHHHHHHHHHCCCHHHHHHHCCC
>Mature Secondary Structure
MLEIGMKIQLEMKNSDNSKTDIYLCTIIDETEDNYIINYPVHKETLKTTFFNIGTYFSAV
CEEECEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHCCEEEEE
YVGEDDAIYRFPTKITSRKKAKIPSLYITKPEVEQWKRIQRREYVRVDASIDVAVHSVLH
EECCCCCEEECCCHHCCCCCCCCCEEEEECCCHHHHHHHHHHHEEEECCCHHHHHHHHHH
QFDPFTTTTLDISGGGVAIITPKEVELVLHTLVDIWLPLEIKYQNKIHHAYAQAEIVTIR
HCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHEEEEEEE
ELNIRKNVVSLQFHSITQKDRQEIIRYCFDKEREKRLKERN
EECCCCCEEEEEEHHHCHHHHHHHHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]