| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is ybbP [H]
Identifier: 23097685
GI number: 23097685
Start: 251957
End: 252778
Strand: Direct
Name: ybbP [H]
Synonym: OB0230
Alternate gene names: 23097685
Gene position: 251957-252778 (Clockwise)
Preceding gene: 23097684
Following gene: 23097686
Centisome position: 6.94
GC content: 38.44
Gene sequence:
>822_bases ATGCTTGATGGGGGATTTGACATATTAAATCTGTTACGTATTGGCGTAGATATAGCTCTCGTCTGGTATGTATTATATAA ATTAATAATGCTAATCAGAGGCACAAAAGCAATTCAATTATTAAAAGGGATTGCCGTAGTGATTATTGTATGGGGAGTGA GTATACTTCTTAACCTCCAAACAATCCAGTTTTTCACAAATCAAATTATTAGTTGGGGACTTATCGTAATTATAATACTT TTCCAGCCAGAATTAAGGCGAGCGCTCGAGCAACTGGGTAGAGGAAATTTATTTGTTCGAAGTGCTAAGTCGCAAGAAGA GATCATTCAAAATGATATAAATGCCATTTTACAATCCTGTAATTATATGGCAAAACGAAGAATCGGGGCGCTTATATCGA TAGAGAAAGAAACAGGGATTGGTGATTATGCGGAGACAGGGATCCCGATAAATGGTAAGCTTTCTCATCAGTTACTTACA AATATTTTTACTCCGAATACGCCATTACATGATGGTGCGGTAATTATAAAAGAAGGAGAAATTTCCGCTGCAGCTTGTTA CTTGCCACTATCGGAGAGTCCTTTTATTTCAAAGGAGCTAGGTACGAGACACCGTGCAGCAATGGGAATTAGTGAAGTGA CTGACGCATTAACGATTGTTGTTTCGGAGGAAACAGGTGCAATCTCGTTTACAAAAAACGGGGAGCTACATCGAGATGTC GATCAAGAAAAATTAGGAGATGTGTTGGCTACACATTTGTCGTTAGCTCCAAAATCCTCTGAAAGAAAATCGTGGAAACG GAGGACCGATAAAAATGGATAA
Upstream 100 bases:
>100_bases ATTAATAACGTTCGATACATGAAATTTGTAAAAAAGGAAAAGAATGTAAAGTAGGCTTTTTTAGACATAGATAAATTAAA CTGGCAAAGGATGTGTGGGC
Downstream 100 bases:
>100_bases TTGGTTTCGCAGTAAATGGTTTGTTCGCTTGTTTTCATTAGCTTTTGCGATATTCTTGTATGCGTTTGTAAATGTTTCTG ATGATAATGAACCAGGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLDGGFDILNLLRIGVDIALVWYVLYKLIMLIRGTKAIQLLKGIAVVIIVWGVSILLNLQTIQFFTNQIISWGLIVIIIL FQPELRRALEQLGRGNLFVRSAKSQEEIIQNDINAILQSCNYMAKRRIGALISIEKETGIGDYAETGIPINGKLSHQLLT NIFTPNTPLHDGAVIIKEGEISAAACYLPLSESPFISKELGTRHRAAMGISEVTDALTIVVSEETGAISFTKNGELHRDV DQEKLGDVLATHLSLAPKSSERKSWKRRTDKNG
Sequences:
>Translated_273_residues MLDGGFDILNLLRIGVDIALVWYVLYKLIMLIRGTKAIQLLKGIAVVIIVWGVSILLNLQTIQFFTNQIISWGLIVIIIL FQPELRRALEQLGRGNLFVRSAKSQEEIIQNDINAILQSCNYMAKRRIGALISIEKETGIGDYAETGIPINGKLSHQLLT NIFTPNTPLHDGAVIIKEGEISAAACYLPLSESPFISKELGTRHRAAMGISEVTDALTIVVSEETGAISFTKNGELHRDV DQEKLGDVLATHLSLAPKSSERKSWKRRTDKNG >Mature_273_residues MLDGGFDILNLLRIGVDIALVWYVLYKLIMLIRGTKAIQLLKGIAVVIIVWGVSILLNLQTIQFFTNQIISWGLIVIIIL FQPELRRALEQLGRGNLFVRSAKSQEEIIQNDINAILQSCNYMAKRRIGALISIEKETGIGDYAETGIPINGKLSHQLLT NIFTPNTPLHDGAVIIKEGEISAAACYLPLSESPFISKELGTRHRAAMGISEVTDALTIVVSEETGAISFTKNGELHRDV DQEKLGDVLATHLSLAPKSSERKSWKRRTDKNG
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 30187; Mature: 30187
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDGGFDILNLLRIGVDIALVWYVLYKLIMLIRGTKAIQLLKGIAVVIIVWGVSILLNLQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH TIQFFTNQIISWGLIVIIILFQPELRRALEQLGRGNLFVRSAKSQEEIIQNDINAILQSC HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH NYMAKRRIGALISIEKETGIGDYAETGIPINGKLSHQLLTNIFTPNTPLHDGAVIIKEGE HHHHHHHHHHHEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCC ISAAACYLPLSESPFISKELGTRHRAAMGISEVTDALTIVVSEETGAISFTKNGELHRDV CCEEEEEECCCCCCCCHHHHCCHHHHHHCHHHHHHHEEEEEECCCCEEEEECCCCCCCCC DQEKLGDVLATHLSLAPKSSERKSWKRRTDKNG CHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MLDGGFDILNLLRIGVDIALVWYVLYKLIMLIRGTKAIQLLKGIAVVIIVWGVSILLNLQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH TIQFFTNQIISWGLIVIIILFQPELRRALEQLGRGNLFVRSAKSQEEIIQNDINAILQSC HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH NYMAKRRIGALISIEKETGIGDYAETGIPINGKLSHQLLTNIFTPNTPLHDGAVIIKEGE HHHHHHHHHHHEEEECCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCC ISAAACYLPLSESPFISKELGTRHRAAMGISEVTDALTIVVSEETGAISFTKNGELHRDV CCEEEEEECCCCCCCCHHHHCCHHHHHHCHHHHHHHEEEEEECCCCEEEEECCCCCCCCC DQEKLGDVLATHLSLAPKSSERKSWKRRTDKNG CHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]