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The map label for this gene is ybbR [H]

Identifier: 23097686

GI number: 23097686

Start: 252771

End: 254084

Strand: Direct

Name: ybbR [H]

Synonym: OB0231

Alternate gene names: 23097686

Gene position: 252771-254084 (Clockwise)

Preceding gene: 23097685

Following gene: 23097687

Centisome position: 6.96

GC content: 38.58

Gene sequence:

>1314_bases
ATGGATAATTGGTTTCGCAGTAAATGGTTTGTTCGCTTGTTTTCATTAGCTTTTGCGATATTCTTGTATGCGTTTGTAAA
TGTTTCTGATGATAATGAACCAGGAAATTCAGATTCAACCTACTCAGGTCTCGGAGAACAATCGGAATTATTAAGTGATG
TGCCGGTAGAGATTGAAATTGACCGAGAGAAATATGTAGTAAGTGGTGTTCCTGAAAGTGTTCAAGTTAGTTTACAAGGT
ACTTCTGGAAGCGTTACACCATTAGTTCTTCAGCGTAACTTTGAGGTGTTTGTAGATCTTGAAGGTTTAGGGGAAGGAAC
TCATGTCGTTGAACTTGAGCATACGATCAATAAAAATGATGTAAAAGTGTATATCGAACCGAAAACGATAGAGGTAACGA
TAGAAGAACGAGCCTCTGAAGAATTCACGGTTGTGGCGGATTTTATTAATGAAGACAAAATGGCCAATGGTTTTGAAATG
ACCGATTCAAGAATAGAACCTTCTACTGTCACAATTACGAGTTCTCGAAGTGTGATAGATGCGATTGGAACTGTCAAAGT
TTATGTGAATCTTGAAGGTGTGGACGGTCCGATTAATAGCCGAGAGCTCCCTGTAAATGTATATGATTTACAAGGAAACG
AGCTTGATGTACGTCTAGATCCTGAGAATGTACAAGTCTCCGTAGATGTTAATAATCCTAGTAAGACTGTATCATTATCT
GTTGCGACAGCGGGAGAACTACCGGAAGGCTATTCATTAAATTCAATTTCTGCTAATGTAGATGAAGTTGAAATTTATTC
AACCAGCAGTCGTCTGGATGAAATTTCCGAAATTACTACCGAAGAAGTCGACTTATCAGAAATAGACGAATCAGGTACCA
TCGAAGTGCCATTACAATTACCAGAAGGTGTTTATGCACCAGAAATGGAAATGGTAGAAGTAACTGTTGATGTAGAAACG
TCGAGAGTATTTGAAAATATTCCGATAGAGGATGAGGGTCTAAGTAGTGGATTGGCTTTTAATTTTCTCGAACCCTCCTC
TGGGGAATTAAATATAACTACATCCGGAGATGCGGCAATTATAAATGAATTATCAATAGAAGATTTTCGGGCATTTATTG
AATTGACAGATCTAAGTCCTGGGCCACATCAATTGCCTATAACGATTGAGGCTCCTAATGAAGATGGAATCAATGTCTCC
ACAGAGGTTGAAGAGGTTAGTGTAGAGATTAGTGGGTCAGAACAAGCTAATCAATCTGAGCAACCAGAACAGCCAGAACA
ATCTGAGGAAGATGAAGACCAAAATCAAGATTAA

Upstream 100 bases:

>100_bases
GATGTCGATCAAGAAAAATTAGGAGATGTGTTGGCTACACATTTGTCGTTAGCTCCAAAATCCTCTGAAAGAAAATCGTG
GAAACGGAGGACCGATAAAA

Downstream 100 bases:

>100_bases
CTAATGTATGTATTGGTAACTAAAGGAGAGGTATTAAATGGGTAAATTTTTTGGAACAGATGGCGTGAGAGGAGTAGCAA
ACGAAGGTCTAACACCTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MDNWFRSKWFVRLFSLAFAIFLYAFVNVSDDNEPGNSDSTYSGLGEQSELLSDVPVEIEIDREKYVVSGVPESVQVSLQG
TSGSVTPLVLQRNFEVFVDLEGLGEGTHVVELEHTINKNDVKVYIEPKTIEVTIEERASEEFTVVADFINEDKMANGFEM
TDSRIEPSTVTITSSRSVIDAIGTVKVYVNLEGVDGPINSRELPVNVYDLQGNELDVRLDPENVQVSVDVNNPSKTVSLS
VATAGELPEGYSLNSISANVDEVEIYSTSSRLDEISEITTEEVDLSEIDESGTIEVPLQLPEGVYAPEMEMVEVTVDVET
SRVFENIPIEDEGLSSGLAFNFLEPSSGELNITTSGDAAIINELSIEDFRAFIELTDLSPGPHQLPITIEAPNEDGINVS
TEVEEVSVEISGSEQANQSEQPEQPEQSEEDEDQNQD

Sequences:

>Translated_437_residues
MDNWFRSKWFVRLFSLAFAIFLYAFVNVSDDNEPGNSDSTYSGLGEQSELLSDVPVEIEIDREKYVVSGVPESVQVSLQG
TSGSVTPLVLQRNFEVFVDLEGLGEGTHVVELEHTINKNDVKVYIEPKTIEVTIEERASEEFTVVADFINEDKMANGFEM
TDSRIEPSTVTITSSRSVIDAIGTVKVYVNLEGVDGPINSRELPVNVYDLQGNELDVRLDPENVQVSVDVNNPSKTVSLS
VATAGELPEGYSLNSISANVDEVEIYSTSSRLDEISEITTEEVDLSEIDESGTIEVPLQLPEGVYAPEMEMVEVTVDVET
SRVFENIPIEDEGLSSGLAFNFLEPSSGELNITTSGDAAIINELSIEDFRAFIELTDLSPGPHQLPITIEAPNEDGINVS
TEVEEVSVEISGSEQANQSEQPEQPEQSEEDEDQNQD
>Mature_437_residues
MDNWFRSKWFVRLFSLAFAIFLYAFVNVSDDNEPGNSDSTYSGLGEQSELLSDVPVEIEIDREKYVVSGVPESVQVSLQG
TSGSVTPLVLQRNFEVFVDLEGLGEGTHVVELEHTINKNDVKVYIEPKTIEVTIEERASEEFTVVADFINEDKMANGFEM
TDSRIEPSTVTITSSRSVIDAIGTVKVYVNLEGVDGPINSRELPVNVYDLQGNELDVRLDPENVQVSVDVNNPSKTVSLS
VATAGELPEGYSLNSISANVDEVEIYSTSSRLDEISEITTEEVDLSEIDESGTIEVPLQLPEGVYAPEMEMVEVTVDVET
SRVFENIPIEDEGLSSGLAFNFLEPSSGELNITTSGDAAIINELSIEDFRAFIELTDLSPGPHQLPITIEAPNEDGINVS
TEVEEVSVEISGSEQANQSEQPEQPEQSEEDEDQNQD

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 YbbR-like domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012505 [H]

Pfam domain/function: PF07949 YbbR [H]

EC number: NA

Molecular weight: Translated: 47993; Mature: 47993

Theoretical pI: Translated: 3.57; Mature: 3.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNWFRSKWFVRLFSLAFAIFLYAFVNVSDDNEPGNSDSTYSGLGEQSELLSDVPVEIEI
CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEE
DREKYVVSGVPESVQVSLQGTSGSVTPLVLQRNFEVFVDLEGLGEGTHVVELEHTINKND
CCCEEEEECCCCEEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCC
VKVYIEPKTIEVTIEERASEEFTVVADFINEDKMANGFEMTDSRIEPSTVTITSSRSVID
EEEEEECCEEEEEEECCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHC
AIGTVKVYVNLEGVDGPINSRELPVNVYDLQGNELDVRLDPENVQVSVDVNNPSKTVSLS
CCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCEEEEE
VATAGELPEGYSLNSISANVDEVEIYSTSSRLDEISEITTEEVDLSEIDESGTIEVPLQL
EEECCCCCCCCEECCCCCCCCEEEEEECHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEEC
PEGVYAPEMEMVEVTVDVETSRVFENIPIEDEGLSSGLAFNFLEPSSGELNITTSGDAAI
CCCCCCCCEEEEEEEEEEEHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEE
INELSIEDFRAFIELTDLSPGPHQLPITIEAPNEDGINVSTEVEEVSVEISGSEQANQSE
EEECCHHHHEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCC
QPEQPEQSEEDEDQNQD
CCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MDNWFRSKWFVRLFSLAFAIFLYAFVNVSDDNEPGNSDSTYSGLGEQSELLSDVPVEIEI
CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEE
DREKYVVSGVPESVQVSLQGTSGSVTPLVLQRNFEVFVDLEGLGEGTHVVELEHTINKND
CCCEEEEECCCCEEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCC
VKVYIEPKTIEVTIEERASEEFTVVADFINEDKMANGFEMTDSRIEPSTVTITSSRSVID
EEEEEECCEEEEEEECCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHC
AIGTVKVYVNLEGVDGPINSRELPVNVYDLQGNELDVRLDPENVQVSVDVNNPSKTVSLS
CCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCEEEEE
VATAGELPEGYSLNSISANVDEVEIYSTSSRLDEISEITTEEVDLSEIDESGTIEVPLQL
EEECCCCCCCCEECCCCCCCCEEEEEECHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEEC
PEGVYAPEMEMVEVTVDVETSRVFENIPIEDEGLSSGLAFNFLEPSSGELNITTSGDAAI
CCCCCCCCEEEEEEEEEEEHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEE
INELSIEDFRAFIELTDLSPGPHQLPITIEAPNEDGINVSTEVEEVSVEISGSEQANQSE
EEECCHHHHEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCC
QPEQPEQSEEDEDQNQD
CCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]