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The map label for this gene is yrbA [C]

Identifier: 21672646

GI number: 21672646

Start: 426286

End: 426528

Strand: Direct

Name: yrbA [C]

Synonym: BUsg372

Alternate gene names: 21672646

Gene position: 426286-426528 (Clockwise)

Preceding gene: 21672634

Following gene: 21672647

Centisome position: 66.46

GC content: 21.4

Gene sequence:

>243_bases
ATGAATAAAAAAAAAATAATATCAATTCTAAAAGAAAAGTTAAATTTAAAAGATATTTATGTTACAGAAGATAATAATCA
TTATGAAATCACAGCTATAGGAAACGTGTTTAAAGGACTAACTCAAGTTAAAAGACAAAAAAAAATCTATAATCCTTTGA
TTGACCTAATTACAGAAAATAAAATTCATGCTATATCTATAAAATCTTACTCTTTAGAAGAGTGGGATAAAAATCAAAAA
TAA

Upstream 100 bases:

>100_bases
TATATCTATCTTAGATATCTATTTTAATGTAAAAAATCAAATTTATCAAAATTTTAAAAATTTAATATTTTATAACAATC
ATTCAAAAGTATATTTAAAA

Downstream 100 bases:

>100_bases
AGTATATTAAAAATAGTATAGAGATTTCATAGTAAATGAATAAATTATATATAGAAGGCGATAAGAAATTAAATGGAAAT
GTTATAATTTCTGGTTCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MNKKKIISILKEKLNLKDIYVTEDNNHYEITAIGNVFKGLTQVKRQKKIYNPLIDLITENKIHAISIKSYSLEEWDKNQK

Sequences:

>Translated_80_residues
MNKKKIISILKEKLNLKDIYVTEDNNHYEITAIGNVFKGLTQVKRQKKIYNPLIDLITENKIHAISIKSYSLEEWDKNQK
>Mature_80_residues
MNKKKIISILKEKLNLKDIYVTEDNNHYEITAIGNVFKGLTQVKRQKKIYNPLIDLITENKIHAISIKSYSLEEWDKNQK

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bolA/yrbA family

Homologues:

Organism=Escherichia coli, GI87082226, Length=80, Percent_Identity=38.75, Blast_Score=85, Evalue=7e-19,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): Y372_BUCAP (Q8K9G5)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660713.1
- ProteinModelPortal:   Q8K9G5
- SMR:   Q8K9G5
- EnsemblBacteria:   EBBUCT00000000132
- GeneID:   1005785
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg372
- GeneTree:   EBGT00050000007822
- HOGENOM:   HBG739421
- OMA:   TINAFTP
- BioCyc:   BAPH198804:BUSG372-MONOMER
- InterPro:   IPR002634
- Gene3D:   G3DSA:3.30.300.90
- PANTHER:   PTHR12735
- PIRSF:   PIRSF003113

Pfam domain/function: PF01722 BolA; SSF82657 BolA

EC number: NA

Molecular weight: Translated: 9446; Mature: 9446

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKKIISILKEKLNLKDIYVTEDNNHYEITAIGNVFKGLTQVKRQKKIYNPLIDLITEN
CCHHHHHHHHHHHCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIHAISIKSYSLEEWDKNQK
CEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MNKKKIISILKEKLNLKDIYVTEDNNHYEITAIGNVFKGLTQVKRQKKIYNPLIDLITEN
CCHHHHHHHHHHHCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIHAISIKSYSLEEWDKNQK
CEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438