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The map label for this gene is yhaR [C]

Identifier: 21672634

GI number: 21672634

Start: 409462

End: 409848

Strand: Direct

Name: yhaR [C]

Synonym: BUsg359

Alternate gene names: 21672634

Gene position: 409462-409848 (Clockwise)

Preceding gene: 21672633

Following gene: 21672646

Centisome position: 63.83

GC content: 21.71

Gene sequence:

>387_bases
ATGAATGTTATAGTTAATACTGAAAATGCCCCAAAACCTATTGGACCATATTCACAAGCTATAAAAAATGAAAATTTTTT
GATTATTTCTGGTCAAATACCTATTGATGTTAAATCAGGGAAAATACCAAATAATATCTCTGAACAAACATATATTGTAT
TAAAAAATATAAAATCAATTATTATTGCGTCAAAATATACAATACAGGATATTATAAAAATTACAGTTTTTACTACTAAT
TTAGAAAAAATTCATATAATTAATGAAATATATGAAAAATTTTTTATAGATAACAAATCATCATTTCCTACAAGATCTTG
TATAGAAGTTCAAAAATTACCAAAAAACGTAAAAATTGAAATGGAAGCAATGGCATTTAAAAAATAA

Upstream 100 bases:

>100_bases
ATTGTGAAAAAGAATTCGCTAAAAACATAGTTTTATAAAAAACTTAAATATTACATATTTCATGTTTTTTTCTATTTAAT
AAAATTAAAAATGGTGCTTT

Downstream 100 bases:

>100_bases
ATTTTACAAGAGTTTAAAATAAATTCCTACTATAATATTTTCAATATGCCGCAAAGCGGCATAAAATCAAACACTTTTAC
GACGAAAAAAAGATGATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MNVIVNTENAPKPIGPYSQAIKNENFLIISGQIPIDVKSGKIPNNISEQTYIVLKNIKSIIIASKYTIQDIIKITVFTTN
LEKIHIINEIYEKFFIDNKSSFPTRSCIEVQKLPKNVKIEMEAMAFKK

Sequences:

>Translated_128_residues
MNVIVNTENAPKPIGPYSQAIKNENFLIISGQIPIDVKSGKIPNNISEQTYIVLKNIKSIIIASKYTIQDIIKITVFTTN
LEKIHIINEIYEKFFIDNKSSFPTRSCIEVQKLPKNVKIEMEAMAFKK
>Mature_128_residues
MNVIVNTENAPKPIGPYSQAIKNENFLIISGQIPIDVKSGKIPNNISEQTYIVLKNIKSIIIASKYTIQDIIKITVFTTN
LEKIHIINEIYEKFFIDNKSSFPTRSCIEVQKLPKNVKIEMEAMAFKK

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family

Homologues:

Organism=Homo sapiens, GI5032215, Length=125, Percent_Identity=36.8, Blast_Score=94, Evalue=4e-20,
Organism=Escherichia coli, GI87082213, Length=127, Percent_Identity=42.5196850393701, Blast_Score=131, Evalue=2e-32,
Organism=Escherichia coli, GI87082396, Length=128, Percent_Identity=43.75, Blast_Score=129, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI25148896, Length=122, Percent_Identity=36.0655737704918, Blast_Score=98, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71982075, Length=122, Percent_Identity=36.0655737704918, Blast_Score=98, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71982068, Length=122, Percent_Identity=36.0655737704918, Blast_Score=97, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6322138, Length=124, Percent_Identity=37.9032258064516, Blast_Score=89, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6320899, Length=108, Percent_Identity=31.4814814814815, Blast_Score=70, Evalue=9e-14,
Organism=Drosophila melanogaster, GI19921376, Length=124, Percent_Identity=34.6774193548387, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y359_BUCAP (Q8K9H7)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660701.1
- ProteinModelPortal:   Q8K9H7
- SMR:   Q8K9H7
- EnsemblBacteria:   EBBUCT00000000409
- GeneID:   1005796
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg359
- GeneTree:   EBGT00050000007889
- HOGENOM:   HBG695954
- OMA:   RTISTAD
- ProtClustDB:   CLSK316023
- BioCyc:   BAPH198804:BUSG359-MONOMER
- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- Gene3D:   G3DSA:3.30.1330.40
- PANTHER:   PTHR11803
- TIGRFAMs:   TIGR00004

Pfam domain/function: PF01042 Ribonuc_L-PSP; SSF55298 YjgF/chorismate_mutase-like

EC number: NA

Molecular weight: Translated: 14585; Mature: 14585

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVIVNTENAPKPIGPYSQAIKNENFLIISGQIPIDVKSGKIPNNISEQTYIVLKNIKSI
CEEEECCCCCCCCCCCHHHHHCCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEHHHHHH
IIASKYTIQDIIKITVFTTNLEKIHIINEIYEKFFIDNKSSFPTRSCIEVQKLPKNVKIE
EEECCCCHHHEEEEEEEECCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEE
MEAMAFKK
EEEEEECC
>Mature Secondary Structure
MNVIVNTENAPKPIGPYSQAIKNENFLIISGQIPIDVKSGKIPNNISEQTYIVLKNIKSI
CEEEECCCCCCCCCCCHHHHHCCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEHHHHHH
IIASKYTIQDIIKITVFTTNLEKIHIINEIYEKFFIDNKSSFPTRSCIEVQKLPKNVKIE
EEECCCCHHHEEEEEEEECCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEE
MEAMAFKK
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438