| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is panC
Identifier: 21672477
GI number: 21672477
Start: 213798
End: 214655
Strand: Reverse
Name: panC
Synonym: BUsg190
Alternate gene names: 21672477
Gene position: 214655-213798 (Counterclockwise)
Preceding gene: 21672478
Following gene: 21672475
Centisome position: 33.46
GC content: 23.19
Gene sequence:
>858_bases ATGAATATTATAAAAAATATCAACCTACTAGAAAAAAAAATAAAAGAACTAAAAAAAAAGAATAAAATAATTGGATTAGT ACCAACAATGGGAAATTTACATGATGGTCACATAAAATTAATTTTATTAGCAAAAAAAAATGTAGATATTGTAATAGTAA GCATTTTTATTAATCCTATGCAATTTGAAGATCTATTGGATCTTAAAAAATATCCCAAAACTTTTGAACAAGATTGTTGT ATTTTAAAACAAGAAAAAGTTGAAATTCTTTTTTGTCCGGATGTAAATGAAATGTATCCTCTTGGATTAAAAAATCACAC ATATATTGATGTACCTAAATTATCTAAAATTATAGAAGGAAAGGTACGTCCTGGACATTTTATAGGCGTAACAACAATAG TTTGTAAGTTATTTAACTTAATACAACCAAATTTTTCTTTCTTTGGAGAAAAAGATTATCAACAACTATTAATTATAAAA AAATTAGTAAAAGAATTAAATTATCCTATAAAAATTATTAGTTTACCTATAATAAGATTAAAAAACGGATTAGCTTTTAG CTCTCGTAACAAGCACCTGAGCGATCTAGCACAACAAAAAGCATCTTACTTATATCAAGCTATAAAACAAACTTGTAATT TTATTAAAAACAACAATGGGAAAAACATTAAAAAAAATATTCATACATCACGTAAATATCTTATAAAAAAAGGATTTTAT ATTGATATATTTAATGCGTATGATTCCAAAACACTTGATCCTATATCTAAAGACAGCAAAAATATTATTATAATAGCATC AGTTTGGTTAGGAAAAATTCGATTAATTGACAATAAAAAAATAATACTAAGAGATTAA
Upstream 100 bases:
>100_bases CAATGGAAGCATTCAAAATGCTATTAAACAATATATCAATGAAGTTAAAAATGGAAATTTCCCCAGTGAAAAATATAGTT TTTAAATTTTTGGAATGATC
Downstream 100 bases:
>100_bases AAAAATTTTTATTTTTTAAAAATCACTTTTCCTATATATGGTAAATATCGATAAGATTGAGCATAATCTATTCCATATCC AACCATAAATTCATCAGGTA
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MNIIKNINLLEKKIKELKKKNKIIGLVPTMGNLHDGHIKLILLAKKNVDIVIVSIFINPMQFEDLLDLKKYPKTFEQDCC ILKQEKVEILFCPDVNEMYPLGLKNHTYIDVPKLSKIIEGKVRPGHFIGVTTIVCKLFNLIQPNFSFFGEKDYQQLLIIK KLVKELNYPIKIISLPIIRLKNGLAFSSRNKHLSDLAQQKASYLYQAIKQTCNFIKNNNGKNIKKNIHTSRKYLIKKGFY IDIFNAYDSKTLDPISKDSKNIIIIASVWLGKIRLIDNKKIILRD
Sequences:
>Translated_285_residues MNIIKNINLLEKKIKELKKKNKIIGLVPTMGNLHDGHIKLILLAKKNVDIVIVSIFINPMQFEDLLDLKKYPKTFEQDCC ILKQEKVEILFCPDVNEMYPLGLKNHTYIDVPKLSKIIEGKVRPGHFIGVTTIVCKLFNLIQPNFSFFGEKDYQQLLIIK KLVKELNYPIKIISLPIIRLKNGLAFSSRNKHLSDLAQQKASYLYQAIKQTCNFIKNNNGKNIKKNIHTSRKYLIKKGFY IDIFNAYDSKTLDPISKDSKNIIIIASVWLGKIRLIDNKKIILRD >Mature_285_residues MNIIKNINLLEKKIKELKKKNKIIGLVPTMGNLHDGHIKLILLAKKNVDIVIVSIFINPMQFEDLLDLKKYPKTFEQDCC ILKQEKVEILFCPDVNEMYPLGLKNHTYIDVPKLSKIIEGKVRPGHFIGVTTIVCKLFNLIQPNFSFFGEKDYQQLLIIK KLVKELNYPIKIISLPIIRLKNGLAFSSRNKHLSDLAQQKASYLYQAIKQTCNFIKNNNGKNIKKNIHTSRKYLIKKGFY IDIFNAYDSKTLDPISKDSKNIIIIASVWLGKIRLIDNKKIILRD
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family
Homologues:
Organism=Escherichia coli, GI1786325, Length=283, Percent_Identity=45.9363957597173, Blast_Score=280, Evalue=7e-77, Organism=Saccharomyces cerevisiae, GI6322046, Length=298, Percent_Identity=34.5637583892617, Blast_Score=171, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PANC_BUCAP (Q8K9U7)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660544.1 - ProteinModelPortal: Q8K9U7 - SMR: Q8K9U7 - EnsemblBacteria: EBBUCT00000000301 - GeneID: 1005387 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg190 - GeneTree: EBGT00050000007772 - HOGENOM: HBG428839 - OMA: DEAHDAK - ProtClustDB: PRK00380 - BioCyc: BAPH198804:BUSG190-MONOMER - GO: GO:0005737 - HAMAP: MF_00158 - InterPro: IPR003721 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR21299:SF1 - TIGRFAMs: TIGR00018
Pfam domain/function: PF02569 Pantoate_ligase
EC number: =6.3.2.1
Molecular weight: Translated: 32966; Mature: 32966
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: ACT_SITE 37-37 BINDING 61-61 BINDING 61-61 BINDING 155-155 BINDING 178-178
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIIKNINLLEKKIKELKKKNKIIGLVPTMGNLHDGHIKLILLAKKNVDIVIVSIFINPM CCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEECCH QFEDLLDLKKYPKTFEQDCCILKQEKVEILFCPDVNEMYPLGLKNHTYIDVPKLSKIIEG HHHHHHHHHHCCCHHHHHHHHEECCCEEEEECCCCCCCCCCCCCCCEEECCHHHHHHHCC KVRPGHFIGVTTIVCKLFNLIQPNFSFFGEKDYQQLLIIKKLVKELNYPIKIISLPIIRL CCCCCCEEHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEE KNGLAFSSRNKHLSDLAQQKASYLYQAIKQTCNFIKNNNGKNIKKNIHTSRKYLIKKGFY CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCE IDIFNAYDSKTLDPISKDSKNIIIIASVWLGKIRLIDNKKIILRD EEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCEEEEEC >Mature Secondary Structure MNIIKNINLLEKKIKELKKKNKIIGLVPTMGNLHDGHIKLILLAKKNVDIVIVSIFINPM CCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEECCH QFEDLLDLKKYPKTFEQDCCILKQEKVEILFCPDVNEMYPLGLKNHTYIDVPKLSKIIEG HHHHHHHHHHCCCHHHHHHHHEECCCEEEEECCCCCCCCCCCCCCCEEECCHHHHHHHCC KVRPGHFIGVTTIVCKLFNLIQPNFSFFGEKDYQQLLIIKKLVKELNYPIKIISLPIIRL CCCCCCEEHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEE KNGLAFSSRNKHLSDLAQQKASYLYQAIKQTCNFIKNNNGKNIKKNIHTSRKYLIKKGFY CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCE IDIFNAYDSKTLDPISKDSKNIIIIASVWLGKIRLIDNKKIILRD EEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438