| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is thrA
Identifier: 21672475
GI number: 21672475
Start: 210043
End: 212487
Strand: Reverse
Name: thrA
Synonym: BUsg188
Alternate gene names: 21672475
Gene position: 212487-210043 (Counterclockwise)
Preceding gene: 21672477
Following gene: 21672474
Centisome position: 33.13
GC content: 25.52
Gene sequence:
>2445_bases ATGAAACTATTGAAATTTGGTGGAACTTCGCTAGCTAATGCAAAAAAGTTTTTATGTGTAGCTGACATTATAGAAAAAAA AAATAAAAAGGAACAAATTGCAGTTGTTCTTTCAGCTCCAGCTAAAATAACTAATTACTTAGCTACAATAATTGAAAATA AGATTGATGATGAAGTTTTAAAAAAAATTAATCTTGCAAAAAACATTTTTATTGAATTAATACAAGACATTAAAAGAATA CAACCACTTTTCCCATATGAAAATACAAAATCAACAATTGAAATAGAATTTAATAAATTAAAAAAAATAATCAATGGTAT TCTTTTAATAAAACAATGTCCAGAAGGTATTAAACCTATCATAATATCTCGTGGAGAAATACTTTCAGTTGATATTATGA AAAATATATTACAATCTAGAAATCATGAAGTTACTATTTTAAATCCAGTCACAAATCTTTTATCAATAGGAAACTATTTA GATTCTACTATTGATATTAAAGAGTCTAAAAAACGTATTAAAAAAATTAATATAGATCAAAAAAATATTATTTTAATGGC TGGTTTTATTGCAGGCAATAAAGAAGGAGAATTAGTAGTACTAGGACGTAATGGTTCTGATTATTCTGCTGCAATTTTAG CTTCTTGCTTAAATGCCAAATGTTGTGAAATTTGGACTGATGTTGATGGTGTTTTGACAGCAGATCCGAGGATAGTTTCA AATACTTACCTATTGGATTACATATCATATCAAGAAGCCATGGAATTATCTTATTTTGGGGCTAAGGTACTACATCCTCG AACTATTGAACCAATTTCTCAGTTTCAAATACCTTGCGTCATAAAAAACACTAATAACACTGAGTCTAAGGGAACTTGGA TTGGTAAAGAAAATAATCCAAGTGACAATTCTCTAAAAGGGGTGACATATCTTGATAACATCATAATGTTCAATATTTCT GGTTCTTGTCTAAAAGATTCAGGAAATACAATTGCACGTATTTTTACTATTCTCTCAAGAGAGAGTATGAAAATTATTTT AATAATACAATCTTCTTCAGAAAATCAAATAAATTTTTGTACTTTCGAAAAAGACATTGATTATATTTTATTAATATTAA AAAAAGAATTTACGTTAGAAATAAAAGAAGGATTATTAAATGATTTTAATATAGTAAAAAATTTAACTATTTTGTCAGTT ATTGGCTCTAATATTTCTGAAAAAAATAATATTGCATCAAAAATTTTTTCTTCTTTAGGTTCATCAAAAATCAATGTACT TGCAATTGCACATGGATCTTCAAAACATTCTATATCAATAGTAATTAAAAAAGAAAACCTTTTACAAGGTATACAAAATA TTCATAATACATTATTTTTTAAGAAAACAATCATAAATGTTTTTCTAATTGGAATAGGTGGAGTGGGAAAAGCATTATTA AAACAAATCTTAAAGCAAGAAAAATTTTTAGACCAAAAAAATATAAAAATACAATTTCGTATGATTGCTAATTCTAAAAA ATTACTTTTTTTAAAAAATTCAATAAATTTAAATAATTGGGAAGAAAATTTTAAAAAATCAAAAGAAAAATTTAATTTAA CAATATTAAATGAACTATTAAAAAATACCTGCGATTCTAATTCAGTAATAATAGATTGTACATCTGATTATATTTTGTCA AAGCAATATATCAGTTTCATTAAAAAGGGATTTCATATAATTACTTCGAATAAAAAAGCTAATACAGATTCGTTAAAATA TTACAGTGAAATTAGAACTACTGCATTAAAAGAAAATAAAAAATTTTTATATGAAACTAATGTTGGAGCAGGATTACCAG TTATTAACACACTTCAAAGTTTATTTAGTACAGGTGATTGTCTTATATCTTTTAAAGGTATATTATCTGGTTCTTTATCT TTCATATTTGGAAAACTGGAAGAAGGTGTTTTATTATCTGAAGCAACTAAAGAAGCAAAAAAATTAGGTTTTACTGAACC TAATCCCTTCGATGATTTATCTGGAATCGACGTTGCTAGAAAACTATTAGTTTTAGCTCGAGAAATTGGATATTCAATAG AACTAAAAGACATAAGCATTGAACCCATATTACCAGAAAGATTTAAAAAATATCAAAATTCTGAAGAATTTTTATTTAAA TTAAAAGAACTAGATTCATTCTTTTCAGAAAGAGTTAATAAAGCACGTGATATAGGCAATGTACTGCGTTTTATTGGAAG TATAGAAAAAAATGGAAAATGTTCAGTGAAAATTGAGGAAATAAATAGCAATAATCCATTATATAAGGTAAAAAATGGTG AAAATGCACTAACATTTTATACAAATTATTATCAACCAATTCCTCTTGTATTAAGAGGATATGGTGCGGGTAACGATGTT ACTGCCTCTGGGGTGTTTTCCGACTTACTACGTATAATATTATAA
Upstream 100 bases:
>100_bases ACTAATCATAATTAATATGAGACAATGTATATATTTAATAAAAACCCGCTCAAAAATAATGCGGGTTTTTTATGATATAA ATTTAAGGATATAAAAAAAT
Downstream 100 bases:
>100_bases GCATCAGCGGAGTACAGTAATGATTAAAATTTATGCACCAGCTTCTGTTGCTAATGTTGGAGTTGGATTTGATATTTTAG GTGCAGCCATTATACCAATA
Product: bifunctional aspartokinase I/homeserine dehydrogenase I
Products: NA
Alternate protein names: AK-HD; Aspartokinase; Homoserine dehydrogenase
Number of amino acids: Translated: 814; Mature: 814
Protein sequence:
>814_residues MKLLKFGGTSLANAKKFLCVADIIEKKNKKEQIAVVLSAPAKITNYLATIIENKIDDEVLKKINLAKNIFIELIQDIKRI QPLFPYENTKSTIEIEFNKLKKIINGILLIKQCPEGIKPIIISRGEILSVDIMKNILQSRNHEVTILNPVTNLLSIGNYL DSTIDIKESKKRIKKINIDQKNIILMAGFIAGNKEGELVVLGRNGSDYSAAILASCLNAKCCEIWTDVDGVLTADPRIVS NTYLLDYISYQEAMELSYFGAKVLHPRTIEPISQFQIPCVIKNTNNTESKGTWIGKENNPSDNSLKGVTYLDNIIMFNIS GSCLKDSGNTIARIFTILSRESMKIILIIQSSSENQINFCTFEKDIDYILLILKKEFTLEIKEGLLNDFNIVKNLTILSV IGSNISEKNNIASKIFSSLGSSKINVLAIAHGSSKHSISIVIKKENLLQGIQNIHNTLFFKKTIINVFLIGIGGVGKALL KQILKQEKFLDQKNIKIQFRMIANSKKLLFLKNSINLNNWEENFKKSKEKFNLTILNELLKNTCDSNSVIIDCTSDYILS KQYISFIKKGFHIITSNKKANTDSLKYYSEIRTTALKENKKFLYETNVGAGLPVINTLQSLFSTGDCLISFKGILSGSLS FIFGKLEEGVLLSEATKEAKKLGFTEPNPFDDLSGIDVARKLLVLAREIGYSIELKDISIEPILPERFKKYQNSEEFLFK LKELDSFFSERVNKARDIGNVLRFIGSIEKNGKCSVKIEEINSNNPLYKVKNGENALTFYTNYYQPIPLVLRGYGAGNDV TASGVFSDLLRIIL
Sequences:
>Translated_814_residues MKLLKFGGTSLANAKKFLCVADIIEKKNKKEQIAVVLSAPAKITNYLATIIENKIDDEVLKKINLAKNIFIELIQDIKRI QPLFPYENTKSTIEIEFNKLKKIINGILLIKQCPEGIKPIIISRGEILSVDIMKNILQSRNHEVTILNPVTNLLSIGNYL DSTIDIKESKKRIKKINIDQKNIILMAGFIAGNKEGELVVLGRNGSDYSAAILASCLNAKCCEIWTDVDGVLTADPRIVS NTYLLDYISYQEAMELSYFGAKVLHPRTIEPISQFQIPCVIKNTNNTESKGTWIGKENNPSDNSLKGVTYLDNIIMFNIS GSCLKDSGNTIARIFTILSRESMKIILIIQSSSENQINFCTFEKDIDYILLILKKEFTLEIKEGLLNDFNIVKNLTILSV IGSNISEKNNIASKIFSSLGSSKINVLAIAHGSSKHSISIVIKKENLLQGIQNIHNTLFFKKTIINVFLIGIGGVGKALL KQILKQEKFLDQKNIKIQFRMIANSKKLLFLKNSINLNNWEENFKKSKEKFNLTILNELLKNTCDSNSVIIDCTSDYILS KQYISFIKKGFHIITSNKKANTDSLKYYSEIRTTALKENKKFLYETNVGAGLPVINTLQSLFSTGDCLISFKGILSGSLS FIFGKLEEGVLLSEATKEAKKLGFTEPNPFDDLSGIDVARKLLVLAREIGYSIELKDISIEPILPERFKKYQNSEEFLFK LKELDSFFSERVNKARDIGNVLRFIGSIEKNGKCSVKIEEINSNNPLYKVKNGENALTFYTNYYQPIPLVLRGYGAGNDV TASGVFSDLLRIIL >Mature_814_residues MKLLKFGGTSLANAKKFLCVADIIEKKNKKEQIAVVLSAPAKITNYLATIIENKIDDEVLKKINLAKNIFIELIQDIKRI QPLFPYENTKSTIEIEFNKLKKIINGILLIKQCPEGIKPIIISRGEILSVDIMKNILQSRNHEVTILNPVTNLLSIGNYL DSTIDIKESKKRIKKINIDQKNIILMAGFIAGNKEGELVVLGRNGSDYSAAILASCLNAKCCEIWTDVDGVLTADPRIVS NTYLLDYISYQEAMELSYFGAKVLHPRTIEPISQFQIPCVIKNTNNTESKGTWIGKENNPSDNSLKGVTYLDNIIMFNIS GSCLKDSGNTIARIFTILSRESMKIILIIQSSSENQINFCTFEKDIDYILLILKKEFTLEIKEGLLNDFNIVKNLTILSV IGSNISEKNNIASKIFSSLGSSKINVLAIAHGSSKHSISIVIKKENLLQGIQNIHNTLFFKKTIINVFLIGIGGVGKALL KQILKQEKFLDQKNIKIQFRMIANSKKLLFLKNSINLNNWEENFKKSKEKFNLTILNELLKNTCDSNSVIIDCTSDYILS KQYISFIKKGFHIITSNKKANTDSLKYYSEIRTTALKENKKFLYETNVGAGLPVINTLQSLFSTGDCLISFKGILSGSLS FIFGKLEEGVLLSEATKEAKKLGFTEPNPFDDLSGIDVARKLLVLAREIGYSIELKDISIEPILPERFKKYQNSEEFLFK LKELDSFFSERVNKARDIGNVLRFIGSIEKNGKCSVKIEEINSNNPLYKVKNGENALTFYTNYYQPIPLVLRGYGAGNDV TASGVFSDLLRIIL
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the homoserine dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1786183, Length=814, Percent_Identity=52.3341523341523, Blast_Score=887, Evalue=0.0, Organism=Escherichia coli, GI1790376, Length=823, Percent_Identity=27.460510328068, Blast_Score=332, Evalue=5e-92, Organism=Escherichia coli, GI1790455, Length=463, Percent_Identity=27.4298056155508, Blast_Score=152, Evalue=9e-38, Organism=Saccharomyces cerevisiae, GI6322599, Length=333, Percent_Identity=32.1321321321321, Blast_Score=159, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6320893, Length=506, Percent_Identity=26.6798418972332, Blast_Score=144, Evalue=5e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AKH_BUCAP (Q8K9U9)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660542.1 - ProteinModelPortal: Q8K9U9 - EnsemblBacteria: EBBUCT00000000028 - GeneID: 1005385 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg188 - GeneTree: EBGT00050000007710 - HOGENOM: HBG298754 - OMA: VKDGENA - ProtClustDB: PRK09436 - BioCyc: BAPH198804:BUSG188-MONOMER - InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 - Gene3D: G3DSA:3.40.1160.10 - Gene3D: G3DSA:3.40.50.720 - PIRSF: PIRSF000727 - TIGRFAMs: TIGR00657
Pfam domain/function: PF00696 AA_kinase; PF00742 Homoserine_dh; PF03447 NAD_binding_3; SSF53633 Aa_kinase
EC number: =2.7.2.4; =1.1.1.3
Molecular weight: Translated: 91380; Mature: 91380
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00324 ASPARTOKINASE; PS01042 HOMOSER_DHGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLKFGGTSLANAKKFLCVADIIEKKNKKEQIAVVLSAPAKITNYLATIIENKIDDEVL CCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHH KKINLAKNIFIELIQDIKRIQPLFPYENTKSTIEIEFNKLKKIINGILLIKQCPEGIKPI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHEEHHCCCCCCCE IISRGEILSVDIMKNILQSRNHEVTILNPVTNLLSIGNYLDSTIDIKESKKRIKKINIDQ EEECCCEEEHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC KNIILMAGFIAGNKEGELVVLGRNGSDYSAAILASCLNAKCCEIWTDVDGVLTADPRIVS CCEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHCCCCCEEECCCEEEC NTYLLDYISYQEAMELSYFGAKVLHPRTIEPISQFQIPCVIKNTNNTESKGTWIGKENNP CEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCEEECCCCCC SDNSLKGVTYLDNIIMFNISGSCLKDSGNTIARIFTILSRESMKIILIIQSSSENQINFC CCCCCCCCEEECCEEEEECCCCEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCEEEE TFEKDIDYILLILKKEFTLEIKEGLLNDFNIVKNLTILSVIGSNISEKNNIASKIFSSLG EECCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC SSKINVLAIAHGSSKHSISIVIKKENLLQGIQNIHNTLFFKKTIINVFLIGIGGVGKALL CCCEEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHH KQILKQEKFLDQKNIKIQFRMIANSKKLLFLKNSINLNNWEENFKKSKEKFNLTILNELL HHHHHHHHCCCCCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH KNTCDSNSVIIDCTSDYILSKQYISFIKKGFHIITSNKKANTDSLKYYSEIRTTALKENK HCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC KFLYETNVGAGLPVINTLQSLFSTGDCLISFKGILSGSLSFIFGKLEEGVLLSEATKEAK CEEEECCCCCCCHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHCCCEEHHHHHHHHH KLGFTEPNPFDDLSGIDVARKLLVLAREIGYSIELKDISIEPILPERFKKYQNSEEFLFK HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHCCCHHHHHH LKELDSFFSERVNKARDIGNVLRFIGSIEKNGKCSVKIEEINSNNPLYKVKNGENALTFY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEECCCCEEEEE TNYYQPIPLVLRGYGAGNDVTASGVFSDLLRIIL ECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure MKLLKFGGTSLANAKKFLCVADIIEKKNKKEQIAVVLSAPAKITNYLATIIENKIDDEVL CCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHH KKINLAKNIFIELIQDIKRIQPLFPYENTKSTIEIEFNKLKKIINGILLIKQCPEGIKPI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHEEHHCCCCCCCE IISRGEILSVDIMKNILQSRNHEVTILNPVTNLLSIGNYLDSTIDIKESKKRIKKINIDQ EEECCCEEEHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC KNIILMAGFIAGNKEGELVVLGRNGSDYSAAILASCLNAKCCEIWTDVDGVLTADPRIVS CCEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHCCCCCEEECCCEEEC NTYLLDYISYQEAMELSYFGAKVLHPRTIEPISQFQIPCVIKNTNNTESKGTWIGKENNP CEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCEEECCCCCC SDNSLKGVTYLDNIIMFNISGSCLKDSGNTIARIFTILSRESMKIILIIQSSSENQINFC CCCCCCCCEEECCEEEEECCCCEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCEEEE TFEKDIDYILLILKKEFTLEIKEGLLNDFNIVKNLTILSVIGSNISEKNNIASKIFSSLG EECCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC SSKINVLAIAHGSSKHSISIVIKKENLLQGIQNIHNTLFFKKTIINVFLIGIGGVGKALL CCCEEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHH KQILKQEKFLDQKNIKIQFRMIANSKKLLFLKNSINLNNWEENFKKSKEKFNLTILNELL HHHHHHHHCCCCCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH KNTCDSNSVIIDCTSDYILSKQYISFIKKGFHIITSNKKANTDSLKYYSEIRTTALKENK HCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC KFLYETNVGAGLPVINTLQSLFSTGDCLISFKGILSGSLSFIFGKLEEGVLLSEATKEAK CEEEECCCCCCCHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHCCCEEHHHHHHHHH KLGFTEPNPFDDLSGIDVARKLLVLAREIGYSIELKDISIEPILPERFKKYQNSEEFLFK HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHCCCHHHHHH LKELDSFFSERVNKARDIGNVLRFIGSIEKNGKCSVKIEEINSNNPLYKVKNGENALTFY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEECCCCEEEEE TNYYQPIPLVLRGYGAGNDVTASGVFSDLLRIIL ECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438