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The map label for this gene is tsr [H]

Identifier: 77748617

GI number: 77748617

Start: 2208828

End: 2211086

Strand: Reverse

Name: tsr [H]

Synonym: XAC1895

Alternate gene names: 77748617

Gene position: 2211086-2208828 (Counterclockwise)

Preceding gene: 21242640

Following gene: 21242638

Centisome position: 42.72

GC content: 62.82

Gene sequence:

>2259_bases
ATGACTAACCTTCTCCAACGTTATAACGTCGGCCCACGACTGGCCGCCGCCTTCGCCGTTCTTATCGTGCTGTCGGGGCT
GATTGCCTTTATCGGCTATCGTGGCCTGAGCGCGTCGCGTGCGCTGGTGGATCACCTGGTTAATCAGAACATGGTGAAAA
TCCGCTTGTCCAACACCATGATGAATGCCAACTCCGTCATTGCCACGCAGATTCGCAATGTCGTGTTGCCGACCTCCAAC
GAGGACAATCTCAAGTTTATCGAAAACATCAAGAATGCCCGTGCAGACTACGTCAAGGCACGCGAGGCCCTGTACGCAAC
CCCGCCCTCGGAAGAAGGCAAGGAAATTCGTGCAGAAATCGATCGCCGCCGAGAGATCGTCAAGGGCTTGAACGACAAGG
TCATCGAGCTGGTGATGACTGGCCATAGCGACGACGCCCTGCCCTTGCTGCTGACCAAGGCTGCACCGGCGATGCAGCAG
TGGCAGGACAAGATCGCAGAAAACATCGCATTGCAGAACAAGCTGGCGGGCGACGCCTCCGCTGCTGCGCTGCAGTCCAT
GGACGAGTCGCGCAAGTTGCTGATCGGCGGTTCGCTGCTGGTCGTGCTGCTGAGCGGCGCCCTGGGCGTGCTGATCACCC
GCAGCCTGACCCAGCCGTTGAGCCGCGCGACCCGCGCTGCAGAATCCATCGCCGGCGGCCGGCTGGATAACGATGTCGAT
ACCCAGTTCAACGACGAGGCCGGGCGCCTGCTCAAGGCGATGAGCAAGATGCAACAACAGTTGCGCAATCTGCTGAGCGC
GCAGACCGACATGGCCCGGCGCCATGATGAAGGCCAGATCAGCTACCGCATCGATGCCGATGCGTTCCCAGGCGACTACG
GCCGCATGGCAAGCGATACCAACAATCTGGTCGCATCGCATATCGCGGTGAAACTGAAGCTTGCGCAGATCATGGGCCGC
TACGCCATCGGCGATCTCAGCGAGGACATGGACAAGCTGCCCGGCGAAAAGGCCGTGCTCACCGACACCATGGCGCAGGT
CAAATTCAACCTGTCGGCAATGAATACCGAGATCAAGCACCTGGCCACATCGGCGGCCAATGGCGACTTCAGTGCCCGCG
GCGATGCCGAGCGTTTCCAGTACGACTTCCGGGTGATGGTGGAAAGCCTCAACACCTTGATGGCCACCGCCGATGGCAAC
CTGCAATCGCTCTCGGGCTTGTTGCAGTCGATCGCTGCCGGCGACCTCACCGCACGCATGAGTGGCGAGTTCCATGGCGT
GTTTGCGCAGATGCGCGACGATGCCAATGCCACCGCCACCCAGCTGGCCGAGATCGTCAGCGGCATCAAGGCCTCGGCCA
CGTCGATCAGGGGTGCGGCAAGCGAAATCGCCGCCGGCAATCAGGACCTGTCGCAGCGCACCGAACAGCAGGCCGCCAAC
CTGGAAGAAACCGCGGCCTCGATGGAAGAGCTCACCTCCACCGTCAAGCAGAACGCCGAAAGCGCACGCCAGGCCAACCA
ACTCGCCATCGGCGCGGCCAGCGTGGCCTCGCAGGGCGGCGAGATCGTCAGCAAGGTGGTCGGCACCATGAGCGGGATCG
AAGCTTCGTCCAAGAAGATCGCCGACATCATCTCCGTCATCGACGGCATCGCCTTCCAGACCAATATCCTGGCCTTGAAC
GCGGCCGTGGAAGCGGCACGCGCCGGTGAACAGGGCCGCGGCTTTGCGGTGGTCGCCTCGGAAGTGCGCACCCTGGCACA
GCGCTCTTCGGGCGCGGCCAAGGAGATCAAGGACCTGATCGACGACTCGGTGCAGCGGGTGGCCGAAGGCTCGGTGCTGG
TGCACAGCGCCGGCACCACCATGGGCGAGATCGTGGCCAGCGTGCAGCGCGTCACCGACATCATGGGCGAGATTTCTGCG
GCCTCGCAGGAGCAGTCGGCCGGGATCGAGCAGGTCAACCAGACCGTGACCAGCATGGACGAAACCACCCAGCAGAACGC
CGCGCTGGTGGAAGAAGCCACCGCCGCGGCACGCGCAATGGAAGAACAGGCCCAGCAACTGACCGAAGCGGTGGCGCTGT
TTCGGCTATCGGCCGACGCAGGAGCGATGACCCGCACCACGCCGGCGGTGCGCCAGATTGCCGCCAAGCGTCCGGTTGCG
GTCAACAAGCCGACGATCAAGCCGCATGTCGCACGCCCGACGGCACGCCCCACTGTTGCGTCGGTCGCATCCGAGGCATC
CAATTGGGCCGAGTTCTAA

Upstream 100 bases:

>100_bases
TACGTGGGCGCCGTTACAGCACATAGCGACAGGTCAGGCGAGTATCGCTGCCGTCAGCGTATCGCTCTTCCCGCTGCTCA
ACGCGTCCAAGGAACCAGCC

Downstream 100 bases:

>100_bases
TATCGGCCCAGAGACTGCACCTAGACACCGCGTTCGCTGGCGAGCGCGGTGTCTCTTTATGGGCGGTACTTCTAGCACGA
GGCGCATCGGCGGGCATCGC

Product: chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 752; Mature: 751

Protein sequence:

>752_residues
MTNLLQRYNVGPRLAAAFAVLIVLSGLIAFIGYRGLSASRALVDHLVNQNMVKIRLSNTMMNANSVIATQIRNVVLPTSN
EDNLKFIENIKNARADYVKAREALYATPPSEEGKEIRAEIDRRREIVKGLNDKVIELVMTGHSDDALPLLLTKAAPAMQQ
WQDKIAENIALQNKLAGDASAAALQSMDESRKLLIGGSLLVVLLSGALGVLITRSLTQPLSRATRAAESIAGGRLDNDVD
TQFNDEAGRLLKAMSKMQQQLRNLLSAQTDMARRHDEGQISYRIDADAFPGDYGRMASDTNNLVASHIAVKLKLAQIMGR
YAIGDLSEDMDKLPGEKAVLTDTMAQVKFNLSAMNTEIKHLATSAANGDFSARGDAERFQYDFRVMVESLNTLMATADGN
LQSLSGLLQSIAAGDLTARMSGEFHGVFAQMRDDANATATQLAEIVSGIKASATSIRGAASEIAAGNQDLSQRTEQQAAN
LEETAASMEELTSTVKQNAESARQANQLAIGAASVASQGGEIVSKVVGTMSGIEASSKKIADIISVIDGIAFQTNILALN
AAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKDLIDDSVQRVAEGSVLVHSAGTTMGEIVASVQRVTDIMGEISA
ASQEQSAGIEQVNQTVTSMDETTQQNAALVEEATAAARAMEEQAQQLTEAVALFRLSADAGAMTRTTPAVRQIAAKRPVA
VNKPTIKPHVARPTARPTVASVASEASNWAEF

Sequences:

>Translated_752_residues
MTNLLQRYNVGPRLAAAFAVLIVLSGLIAFIGYRGLSASRALVDHLVNQNMVKIRLSNTMMNANSVIATQIRNVVLPTSN
EDNLKFIENIKNARADYVKAREALYATPPSEEGKEIRAEIDRRREIVKGLNDKVIELVMTGHSDDALPLLLTKAAPAMQQ
WQDKIAENIALQNKLAGDASAAALQSMDESRKLLIGGSLLVVLLSGALGVLITRSLTQPLSRATRAAESIAGGRLDNDVD
TQFNDEAGRLLKAMSKMQQQLRNLLSAQTDMARRHDEGQISYRIDADAFPGDYGRMASDTNNLVASHIAVKLKLAQIMGR
YAIGDLSEDMDKLPGEKAVLTDTMAQVKFNLSAMNTEIKHLATSAANGDFSARGDAERFQYDFRVMVESLNTLMATADGN
LQSLSGLLQSIAAGDLTARMSGEFHGVFAQMRDDANATATQLAEIVSGIKASATSIRGAASEIAAGNQDLSQRTEQQAAN
LEETAASMEELTSTVKQNAESARQANQLAIGAASVASQGGEIVSKVVGTMSGIEASSKKIADIISVIDGIAFQTNILALN
AAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKDLIDDSVQRVAEGSVLVHSAGTTMGEIVASVQRVTDIMGEISA
ASQEQSAGIEQVNQTVTSMDETTQQNAALVEEATAAARAMEEQAQQLTEAVALFRLSADAGAMTRTTPAVRQIAAKRPVA
VNKPTIKPHVARPTARPTVASVASEASNWAEF
>Mature_751_residues
TNLLQRYNVGPRLAAAFAVLIVLSGLIAFIGYRGLSASRALVDHLVNQNMVKIRLSNTMMNANSVIATQIRNVVLPTSNE
DNLKFIENIKNARADYVKAREALYATPPSEEGKEIRAEIDRRREIVKGLNDKVIELVMTGHSDDALPLLLTKAAPAMQQW
QDKIAENIALQNKLAGDASAAALQSMDESRKLLIGGSLLVVLLSGALGVLITRSLTQPLSRATRAAESIAGGRLDNDVDT
QFNDEAGRLLKAMSKMQQQLRNLLSAQTDMARRHDEGQISYRIDADAFPGDYGRMASDTNNLVASHIAVKLKLAQIMGRY
AIGDLSEDMDKLPGEKAVLTDTMAQVKFNLSAMNTEIKHLATSAANGDFSARGDAERFQYDFRVMVESLNTLMATADGNL
QSLSGLLQSIAAGDLTARMSGEFHGVFAQMRDDANATATQLAEIVSGIKASATSIRGAASEIAAGNQDLSQRTEQQAANL
EETAASMEELTSTVKQNAESARQANQLAIGAASVASQGGEIVSKVVGTMSGIEASSKKIADIISVIDGIAFQTNILALNA
AVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKDLIDDSVQRVAEGSVLVHSAGTTMGEIVASVQRVTDIMGEISAA
SQEQSAGIEQVNQTVTSMDETTQQNAALVEEATAAARAMEEQAQQLTEAVALFRLSADAGAMTRTTPAVRQIAAKRPVAV
NKPTIKPHVARPTARPTVASVASEASNWAEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=347, Percent_Identity=54.7550432276657, Blast_Score=303, Evalue=4e-83,
Organism=Escherichia coli, GI2367378, Length=345, Percent_Identity=56.8115942028986, Blast_Score=303, Evalue=4e-83,
Organism=Escherichia coli, GI1788194, Length=291, Percent_Identity=58.0756013745705, Blast_Score=286, Evalue=4e-78,
Organism=Escherichia coli, GI1787690, Length=296, Percent_Identity=56.7567567567568, Blast_Score=280, Evalue=3e-76,
Organism=Escherichia coli, GI1789453, Length=251, Percent_Identity=43.8247011952191, Blast_Score=207, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 79974; Mature: 79843

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLLQRYNVGPRLAAAFAVLIVLSGLIAFIGYRGLSASRALVDHLVNQNMVKIRLSNTM
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCHH
MNANSVIATQIRNVVLPTSNEDNLKFIENIKNARADYVKAREALYATPPSEEGKEIRAEI
HCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
DRRREIVKGLNDKVIELVMTGHSDDALPLLLTKAAPAMQQWQDKIAENIALQNKLAGDAS
HHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHH
AAALQSMDESRKLLIGGSLLVVLLSGALGVLITRSLTQPLSRATRAAESIAGGRLDNDVD
HHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TQFNDEAGRLLKAMSKMQQQLRNLLSAQTDMARRHDEGQISYRIDADAFPGDYGRMASDT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCH
NNLVASHIAVKLKLAQIMGRYAIGDLSEDMDKLPGEKAVLTDTMAQVKFNLSAMNTEIKH
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LATSAANGDFSARGDAERFQYDFRVMVESLNTLMATADGNLQSLSGLLQSIAAGDLTARM
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHH
SGEFHGVFAQMRDDANATATQLAEIVSGIKASATSIRGAASEIAAGNQDLSQRTEQQAAN
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LEETAASMEELTSTVKQNAESARQANQLAIGAASVASQGGEIVSKVVGTMSGIEASSKKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHH
ADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKDLI
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
DDSVQRVAEGSVLVHSAGTTMGEIVASVQRVTDIMGEISAASQEQSAGIEQVNQTVTSMD
HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHH
ETTQQNAALVEEATAAARAMEEQAQQLTEAVALFRLSADAGAMTRTTPAVRQIAAKRPVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCC
VNKPTIKPHVARPTARPTVASVASEASNWAEF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TNLLQRYNVGPRLAAAFAVLIVLSGLIAFIGYRGLSASRALVDHLVNQNMVKIRLSNTM
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCHH
MNANSVIATQIRNVVLPTSNEDNLKFIENIKNARADYVKAREALYATPPSEEGKEIRAEI
HCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
DRRREIVKGLNDKVIELVMTGHSDDALPLLLTKAAPAMQQWQDKIAENIALQNKLAGDAS
HHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHH
AAALQSMDESRKLLIGGSLLVVLLSGALGVLITRSLTQPLSRATRAAESIAGGRLDNDVD
HHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TQFNDEAGRLLKAMSKMQQQLRNLLSAQTDMARRHDEGQISYRIDADAFPGDYGRMASDT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCH
NNLVASHIAVKLKLAQIMGRYAIGDLSEDMDKLPGEKAVLTDTMAQVKFNLSAMNTEIKH
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LATSAANGDFSARGDAERFQYDFRVMVESLNTLMATADGNLQSLSGLLQSIAAGDLTARM
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHH
SGEFHGVFAQMRDDANATATQLAEIVSGIKASATSIRGAASEIAAGNQDLSQRTEQQAAN
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LEETAASMEELTSTVKQNAESARQANQLAIGAASVASQGGEIVSKVVGTMSGIEASSKKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHH
ADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKDLI
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
DDSVQRVAEGSVLVHSAGTTMGEIVASVQRVTDIMGEISAASQEQSAGIEQVNQTVTSMD
HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHH
ETTQQNAALVEEATAAARAMEEQAQQLTEAVALFRLSADAGAMTRTTPAVRQIAAKRPVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCC
VNKPTIKPHVARPTARPTVASVASEASNWAEF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]