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The map label for this gene is tsr [H]

Identifier: 21242638

GI number: 21242638

Start: 2206130

End: 2208199

Strand: Reverse

Name: tsr [H]

Synonym: XAC1894

Alternate gene names: 21242638

Gene position: 2208199-2206130 (Counterclockwise)

Preceding gene: 77748617

Following gene: 21242637

Centisome position: 42.67

GC content: 64.35

Gene sequence:

>2070_bases
ATGTCCATTGCCACGGTCAATATCGAGACCGGTGCGCGCGGCTTTATGCTGTCCGGGCAGGAAACGCATCTCAAACCGTA
CAACAACGGCAAGGTGCAGTTCGAACAGGAATTCACCAACGCCAAGACGTTGACCGCCGACAACCCGGTTCAGCAGGAAC
GCCTGCAGCGCCTGCATGCGGCGTATGAGCAGTTCATGGGCTTTGAGGACAACCTGATCGCGCTGCGTGGCAAAAGCAGC
GACACCGAGCTGTCCGCGCTGCTGACGCAATTCAAGGCCGGCCATGAACGTGCGGCGATGGGGCAGATCCGTCAGCTGCT
GGTCGACTTCGAAGCGCAGGAAAACCAATTGCTGGTCAAGCGCAGCGCAACATTGAAGGCCGCGAAGGCCAGCAACCGTT
GGTCGATGATCATCGGCAGCGGCATCGCCGTGCTGGTGGCGCTGGCCAGCGGCTGGTTGATCCGTCGTCGCCTGGTCAAT
CGCCTGGGCACCGCCTCGCACGTGGCCGATTCCATCGCCGCTGGCAATCTGTCGGTCAGCGTGGACAGCAGCGGCACCGA
TGAAACCGGTCGCCTGCTCTCCAGCATGAGCAAGATGCAGCAGCAGTTGCAGAAGGTCTTGCACGGCCAGCAGGAAATGA
AGCGCCGGCACGATCAGGGCGAGCTGAATTTCCGCCTGGACGACGCAGCGTTTCCTGGCGACTACGCCACCATCGTGCGC
GGCAACAACGACCTGGCCGCCTCGCATGTGGCCGTGATGATGCGGTTGGCGCAGATCATGGGCCAATACGCGATCGGCGA
CCTGCGCGAAGACATGGAAGCCCTGCCCGGCGACAAGGCCGTGCTCAGCGACACCATGGCCAAGGTCAAGGGCAACCTGT
CTTCGGTCAATCACGCCATCAAGCATCTTTCCCAATGCGCCGCCAATGGCGACTTCAGCGCCCGCGGCGATGCGGAAAAC
TTCCAGCACGACTTCCGCGTGATGGTGGAAAGCCTCAACACCTTGATGGCCACCGCCGACGGCAACCTGCAGTCGCTCTC
GGGCTTGTTGCAGGCGATCGCTGCCGGCGACCTCACCGCCCGCATGAGCGGTGAATTCCACGGCGTGTTCGCGCAGATGC
GCGACGATGCCAATGCCACCGCCGTGCAGCTGGCCGAAATCGTCACCGGCATCAAGGCCTCGGCCATCTCGATCAAGGGC
GCTGCCAGCGAAATCGCTGCCGGCAACAGCGACCTGTCGCAGCGCACCGAACAGCAGGCCGCCAGCCTGGAAGAAACTGC
CGCCTCGATGGAAGAGCTCACCTCCACCGTCAAGCAGAACGCCGAAAGCGCACGACAGGCCAACCAGCTCGCCATCGGCG
CGGCCAGCGTGGCCACGCAGGGCGGCGAGATCGCCGGCCAGGTGGTCGAGACCATGGCCGGCATCGAGGCCTCGTCGAAG
AAGATCGCCGATATCATCTCCGTCATCGACGGCATCGCCTTCCAGACCAACATCCTGGCCTTGAACGCCGCGGTGGAAGC
GGCGCGTGCCGGCGAGCAAGGCCGCGGCTTCGCCGTGGTGGCTTCTGAAGTGCGTACGCTGGCACAGCGCTCTTCCGGCG
CCGCCAAGGAGATCAAGGACCTGATCGCCGACTCGGTCGAACGTGTGGCCGCCGGTTCGGTGCTGGTCAATACCGCAGGC
AGGACCATGAGCGAGCTGGTGACCAGCGTGCAGCGGGTCACCGACATCATGGGCGAGATCTCCGCCGCTTCGCAGGAACA
GTCGGCTGGCATCGAACAGGTCAACCAGACCGTCACCCAGATGGACGAAACCACCCAACAGAACGCCGCGCTGGTGGAAG
AAGCCACTGCCGCCGCGCGTTCGCTCGAAGAACAGGCGATCGGATTGACCGAGGCCGTGGCGGTCTTCAAGACCGAGCAA
GGCACCGCCAGCACTGTCCGCACGGCATCGGTCGCCAAGGCCGCGCCCGCCGTGCGCGCCAAGCTGACCTCGATCGGCGG
CACCGCTGCCGCCAAGCCGCGCGCGGTCGCTGCATCGACGACCGTCGAGACCAGCTGGCAGGAGTTCTGA

Upstream 100 bases:

>100_bases
TTTGATCGTCGCAACGGTGGGGCTACGTGGGCAGTCCCAGCTGTCGGACGCGGTGGCCATGAACGACCACACCTATCAGG
TCATCGGCACCGGCCGCGCC

Downstream 100 bases:

>100_bases
CCAGCACGCACTGGCATCGGCGGGGAATATTCACCGATGCCATCTGCGCCAGGCGACCGCTCCACACATCGGTCGTTGCA
ACACGCAGGGCCCGACCAAG

Product: chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 689; Mature: 688

Protein sequence:

>689_residues
MSIATVNIETGARGFMLSGQETHLKPYNNGKVQFEQEFTNAKTLTADNPVQQERLQRLHAAYEQFMGFEDNLIALRGKSS
DTELSALLTQFKAGHERAAMGQIRQLLVDFEAQENQLLVKRSATLKAAKASNRWSMIIGSGIAVLVALASGWLIRRRLVN
RLGTASHVADSIAAGNLSVSVDSSGTDETGRLLSSMSKMQQQLQKVLHGQQEMKRRHDQGELNFRLDDAAFPGDYATIVR
GNNDLAASHVAVMMRLAQIMGQYAIGDLREDMEALPGDKAVLSDTMAKVKGNLSSVNHAIKHLSQCAANGDFSARGDAEN
FQHDFRVMVESLNTLMATADGNLQSLSGLLQAIAAGDLTARMSGEFHGVFAQMRDDANATAVQLAEIVTGIKASAISIKG
AASEIAAGNSDLSQRTEQQAASLEETAASMEELTSTVKQNAESARQANQLAIGAASVATQGGEIAGQVVETMAGIEASSK
KIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKDLIADSVERVAAGSVLVNTAG
RTMSELVTSVQRVTDIMGEISAASQEQSAGIEQVNQTVTQMDETTQQNAALVEEATAAARSLEEQAIGLTEAVAVFKTEQ
GTASTVRTASVAKAAPAVRAKLTSIGGTAAAKPRAVAASTTVETSWQEF

Sequences:

>Translated_689_residues
MSIATVNIETGARGFMLSGQETHLKPYNNGKVQFEQEFTNAKTLTADNPVQQERLQRLHAAYEQFMGFEDNLIALRGKSS
DTELSALLTQFKAGHERAAMGQIRQLLVDFEAQENQLLVKRSATLKAAKASNRWSMIIGSGIAVLVALASGWLIRRRLVN
RLGTASHVADSIAAGNLSVSVDSSGTDETGRLLSSMSKMQQQLQKVLHGQQEMKRRHDQGELNFRLDDAAFPGDYATIVR
GNNDLAASHVAVMMRLAQIMGQYAIGDLREDMEALPGDKAVLSDTMAKVKGNLSSVNHAIKHLSQCAANGDFSARGDAEN
FQHDFRVMVESLNTLMATADGNLQSLSGLLQAIAAGDLTARMSGEFHGVFAQMRDDANATAVQLAEIVTGIKASAISIKG
AASEIAAGNSDLSQRTEQQAASLEETAASMEELTSTVKQNAESARQANQLAIGAASVATQGGEIAGQVVETMAGIEASSK
KIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKDLIADSVERVAAGSVLVNTAG
RTMSELVTSVQRVTDIMGEISAASQEQSAGIEQVNQTVTQMDETTQQNAALVEEATAAARSLEEQAIGLTEAVAVFKTEQ
GTASTVRTASVAKAAPAVRAKLTSIGGTAAAKPRAVAASTTVETSWQEF
>Mature_688_residues
SIATVNIETGARGFMLSGQETHLKPYNNGKVQFEQEFTNAKTLTADNPVQQERLQRLHAAYEQFMGFEDNLIALRGKSSD
TELSALLTQFKAGHERAAMGQIRQLLVDFEAQENQLLVKRSATLKAAKASNRWSMIIGSGIAVLVALASGWLIRRRLVNR
LGTASHVADSIAAGNLSVSVDSSGTDETGRLLSSMSKMQQQLQKVLHGQQEMKRRHDQGELNFRLDDAAFPGDYATIVRG
NNDLAASHVAVMMRLAQIMGQYAIGDLREDMEALPGDKAVLSDTMAKVKGNLSSVNHAIKHLSQCAANGDFSARGDAENF
QHDFRVMVESLNTLMATADGNLQSLSGLLQAIAAGDLTARMSGEFHGVFAQMRDDANATAVQLAEIVTGIKASAISIKGA
ASEIAAGNSDLSQRTEQQAASLEETAASMEELTSTVKQNAESARQANQLAIGAASVATQGGEIAGQVVETMAGIEASSKK
IADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKDLIADSVERVAAGSVLVNTAGR
TMSELVTSVQRVTDIMGEISAASQEQSAGIEQVNQTVTQMDETTQQNAALVEEATAAARSLEEQAIGLTEAVAVFKTEQG
TASTVRTASVAKAAPAVRAKLTSIGGTAAAKPRAVAASTTVETSWQEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=491, Percent_Identity=45.6211812627291, Blast_Score=303, Evalue=3e-83,
Organism=Escherichia coli, GI1788195, Length=254, Percent_Identity=66.5354330708661, Blast_Score=290, Evalue=1e-79,
Organism=Escherichia coli, GI1788194, Length=293, Percent_Identity=58.0204778156997, Blast_Score=283, Evalue=3e-77,
Organism=Escherichia coli, GI1787690, Length=304, Percent_Identity=56.9078947368421, Blast_Score=280, Evalue=2e-76,
Organism=Escherichia coli, GI1789453, Length=250, Percent_Identity=42.4, Blast_Score=195, Evalue=8e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 72766; Mature: 72634

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIATVNIETGARGFMLSGQETHLKPYNNGKVQFEQEFTNAKTLTADNPVQQERLQRLHA
CCEEEEEECCCCCCEEECCCCCCCCCCCCCCEEEEEHHCCCCEECCCCCHHHHHHHHHHH
AYEQFMGFEDNLIALRGKSSDTELSALLTQFKAGHERAAMGQIRQLLVDFEAQENQLLVK
HHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEE
RSATLKAAKASNRWSMIIGSGIAVLVALASGWLIRRRLVNRLGTASHVADSIAAGNLSVS
HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEE
VDSSGTDETGRLLSSMSKMQQQLQKVLHGQQEMKRRHDQGELNFRLDDAAFPGDYATIVR
ECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCCCCCCCEEEEE
GNNDLAASHVAVMMRLAQIMGQYAIGDLREDMEALPGDKAVLSDTMAKVKGNLSSVNHAI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHH
KHLSQCAANGDFSARGDAENFQHDFRVMVESLNTLMATADGNLQSLSGLLQAIAAGDLTA
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHH
RMSGEFHGVFAQMRDDANATAVQLAEIVTGIKASAISIKGAASEIAAGNSDLSQRTEQQA
HHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHEEECCCHHHHHCCCCHHHHHHHHHH
ASLEETAASMEELTSTVKQNAESARQANQLAIGAASVATQGGEIAGQVVETMAGIEASSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHH
KIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKD
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
LIADSVERVAAGSVLVNTAGRTMSELVTSVQRVTDIMGEISAASQEQSAGIEQVNQTVTQ
HHHHHHHHHHHCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHH
MDETTQQNAALVEEATAAARSLEEQAIGLTEAVAVFKTEQGTASTVRTASVAKAAPAVRA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
KLTSIGGTAAAKPRAVAASTTVETSWQEF
HHHHCCCCCCCCCCCEEECCCCCCCHHCC
>Mature Secondary Structure 
SIATVNIETGARGFMLSGQETHLKPYNNGKVQFEQEFTNAKTLTADNPVQQERLQRLHA
CEEEEEECCCCCCEEECCCCCCCCCCCCCCEEEEEHHCCCCEECCCCCHHHHHHHHHHH
AYEQFMGFEDNLIALRGKSSDTELSALLTQFKAGHERAAMGQIRQLLVDFEAQENQLLVK
HHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEE
RSATLKAAKASNRWSMIIGSGIAVLVALASGWLIRRRLVNRLGTASHVADSIAAGNLSVS
HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEE
VDSSGTDETGRLLSSMSKMQQQLQKVLHGQQEMKRRHDQGELNFRLDDAAFPGDYATIVR
ECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCCCCCCCEEEEE
GNNDLAASHVAVMMRLAQIMGQYAIGDLREDMEALPGDKAVLSDTMAKVKGNLSSVNHAI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHH
KHLSQCAANGDFSARGDAENFQHDFRVMVESLNTLMATADGNLQSLSGLLQAIAAGDLTA
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHH
RMSGEFHGVFAQMRDDANATAVQLAEIVTGIKASAISIKGAASEIAAGNSDLSQRTEQQA
HHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHEEECCCHHHHHCCCCHHHHHHHHHH
ASLEETAASMEELTSTVKQNAESARQANQLAIGAASVATQGGEIAGQVVETMAGIEASSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHH
KIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKD
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
LIADSVERVAAGSVLVNTAGRTMSELVTSVQRVTDIMGEISAASQEQSAGIEQVNQTVTQ
HHHHHHHHHHHCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHH
MDETTQQNAALVEEATAAARSLEEQAIGLTEAVAVFKTEQGTASTVRTASVAKAAPAVRA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
KLTSIGGTAAAKPRAVAASTTVETSWQEF
HHHHCCCCCCCCCCCEEECCCCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]