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The map label for this gene is tsr [H]

Identifier: 21242640

GI number: 21242640

Start: 2211536

End: 2213620

Strand: Reverse

Name: tsr [H]

Synonym: XAC1896

Alternate gene names: 21242640

Gene position: 2213620-2211536 (Counterclockwise)

Preceding gene: 21242641

Following gene: 77748617

Centisome position: 42.77

GC content: 64.46

Gene sequence:

>2085_bases
TTGCGCGGTTTTGCCGGCGAATTCCGCGTCTACGAAGTGGGCCAGTTCCTCAATCTGGAAGACCCGGAGCGCTACGCGTA
TTTCTTCAAGCGCATGGATGAAATCCAGGCCAAGTACGCCGATACCCAGAAGCAGCTGGACGCCAAGATCGATGCGGCCT
CGCCGTTGAAAGCCGAGTACGACAAGCTGACCGATGCCAGCGCACGCTATTTCGCGGCCAACCAGCAACTGCGCAAGCTC
TATGCGGAGCCCGACCGCGCCGCCGCGATGGAGTTTTCGCGCAAGCAATCGGGCGAGATCCGCAAGGAACTGTTCGCCTC
GGTGGACAAGCTGTATGCACAGCAGTCCAAGGCGCTGGGCGACATGGTGAGTGCCAGCGCCAGCTCGTTCAAGCTGACCA
GCGCAGTGCTGCTGATCGGCACCTTGTTGATGGCCGCCTTGTCGGTGACCTTCGGCTGGTTGATCGCGCGCAGCATCACC
AGCCCGATCGCCAAGGCACTGGGCGCCATCCGGGCGGTTTCGCGCGGCGATCTGGGCGTGCAGGTCGGCAAGACCAGCAA
GGACGAGATCGGCCAGATGCTCGATGCCACTGGTGGCATGACCCAGATGCTGCGCCGTTTCTCCGACGAAACCGCGCGCA
TGTCGCACCTGCATGCTGCCGAAGACATCACCCACCGCATGCCGGAAGATTTTCCCGGTGTCTACGGCAACCTTGCCACC
GGCATCAATACGATGATCTTCGAGCATCTCGATGCCATCGTCGATGCAGTGCGCATCCTCAATCAATACGCCCAGGGCGA
CCTTAGCGAAGATGCGCGTCGCCTGCCCGCCAGCCGCGCGGTGCTGCATGAGGCAATGGATGCAGCCAAGGCCAGCTTGT
TGTCGATCAACACCGAGATCAAGCATCTGGCGCAGGCGGCCGCCTCCGGCGATTTCAGTGCGCGTGGCGATGCGCAGCGC
TTCAAGTACGACTTCGCCGTGATGGTGTCGGATCTGAACTCGATGATGGAAGTCAGCGACCGCAACCTGGGCAAGCTGTC
GCAGCTGCTCGGCGCGGTGGCCGATGGCGACCTGACCGCGCGCATGGACGGGCAATTCCACGGGGTATTCGCACGTCTGC
GCGACGACGCCAATGCGACCACCCAGCGCCTGACCGACATCGTGGGCCGCATCAAGCACTCCACCCTGGCCATCAACACG
GCCGCCGGCGAGATTGCCGCCGGCAACAACGACCTGTCGCAACGCACCGAGCAGCAGGCGGCCAACCTGGAAGAAACCGC
CGCTTCGATGGAAGAGCTCACCTCCACGGTCAAGCAGAACGCCGAGCACGCGCGTCAGGCCAACCAGCTCGCCATCGGCG
CGGCAGGCGTGGCATCGCACGGCGGCAACGTGGTCGGCCAGGTGGTCACCACCATGTCCGGCATCGAAACCTCGTCCAAG
AAGATCGCCGAGATCATCAGCGTCATCGACGGCATCGCGTTCCAGACCAACATCCTGGCCTTGAATGCCGCGGTGGAAGC
GGCGCGCGCCGGCGAGCAGGGCCGTGGCTTTGCCGTGGTGGCCTCGGAAGTGCGCACGCTGGCGCAGCGTTCGGCCGGTG
CAGCGAAGGAAATCAAGGGCCTGATCGACGACTCGGTCAGCAAGGTAGCCGAAGGCTCGGCACTGGTGAATCAGGCCGGC
AGCACCATGGCCGAGATCGTCTCCTCGGTGCAGCGCGTCACCGACATCATGAGCGAGATTTCTGCCGCCTCGCAGGAGCA
GTCGGCCGGCATCGAGCAGGTCAACCAGACCGTCACCCACATGGACGAGGCCACCCAGCAGAACGCCGCGTTGGTGGAAG
AAGCCACCGCCGCAGCACGCTCGATGGAAGAGCAGGCGCAGCAGCTCACCGAAGCGGTGGCGCAGTTCCGCCTCTCGGCC
GAGCTGGAAGCGGTAACCCGTGCCACGCCGGTGGTGCGCCACATCGCCGCCAAGCGCCCGGTTGCTGCCAGCATGCCGGC
CAGCAAGCCGCATGCTGCGCGCCCGGCGGGCCGTGCCGCAGCAGCAGTGGCACCGTCCAACGAATCCGATTGGTCCGAGT
TCTAA

Upstream 100 bases:

>100_bases
ATTACTGGGCGGTTTGGGTTTTTCGCGCATGAAGCAGATGCAGAGCGAAACCACCTTGATCAACCAGGACGTGGTGCCGG
TGTTGAGCCGCCTGTCCGAG

Downstream 100 bases:

>100_bases
GCGGCGAGACGGCTGCGCTCGCCGCCAGGTGGGCGCGACCGGCGCCGGGGCAGCTGTTCGCAGCGTGCCGGTCATCGAGT
CGAACATCCCGCACGGCTGA

Product: chemotaxis protein

Products: NA

Alternate protein names: MCP-II; Aspartate chemoreceptor protein [H]

Number of amino acids: Translated: 694; Mature: 694

Protein sequence:

>694_residues
MRGFAGEFRVYEVGQFLNLEDPERYAYFFKRMDEIQAKYADTQKQLDAKIDAASPLKAEYDKLTDASARYFAANQQLRKL
YAEPDRAAAMEFSRKQSGEIRKELFASVDKLYAQQSKALGDMVSASASSFKLTSAVLLIGTLLMAALSVTFGWLIARSIT
SPIAKALGAIRAVSRGDLGVQVGKTSKDEIGQMLDATGGMTQMLRRFSDETARMSHLHAAEDITHRMPEDFPGVYGNLAT
GINTMIFEHLDAIVDAVRILNQYAQGDLSEDARRLPASRAVLHEAMDAAKASLLSINTEIKHLAQAAASGDFSARGDAQR
FKYDFAVMVSDLNSMMEVSDRNLGKLSQLLGAVADGDLTARMDGQFHGVFARLRDDANATTQRLTDIVGRIKHSTLAINT
AAGEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAEHARQANQLAIGAAGVASHGGNVVGQVVTTMSGIETSSK
KIAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKGLIDDSVSKVAEGSALVNQAG
STMAEIVSSVQRVTDIMSEISAASQEQSAGIEQVNQTVTHMDEATQQNAALVEEATAAARSMEEQAQQLTEAVAQFRLSA
ELEAVTRATPVVRHIAAKRPVAASMPASKPHAARPAGRAAAAVAPSNESDWSEF

Sequences:

>Translated_694_residues
MRGFAGEFRVYEVGQFLNLEDPERYAYFFKRMDEIQAKYADTQKQLDAKIDAASPLKAEYDKLTDASARYFAANQQLRKL
YAEPDRAAAMEFSRKQSGEIRKELFASVDKLYAQQSKALGDMVSASASSFKLTSAVLLIGTLLMAALSVTFGWLIARSIT
SPIAKALGAIRAVSRGDLGVQVGKTSKDEIGQMLDATGGMTQMLRRFSDETARMSHLHAAEDITHRMPEDFPGVYGNLAT
GINTMIFEHLDAIVDAVRILNQYAQGDLSEDARRLPASRAVLHEAMDAAKASLLSINTEIKHLAQAAASGDFSARGDAQR
FKYDFAVMVSDLNSMMEVSDRNLGKLSQLLGAVADGDLTARMDGQFHGVFARLRDDANATTQRLTDIVGRIKHSTLAINT
AAGEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAEHARQANQLAIGAAGVASHGGNVVGQVVTTMSGIETSSK
KIAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKGLIDDSVSKVAEGSALVNQAG
STMAEIVSSVQRVTDIMSEISAASQEQSAGIEQVNQTVTHMDEATQQNAALVEEATAAARSMEEQAQQLTEAVAQFRLSA
ELEAVTRATPVVRHIAAKRPVAASMPASKPHAARPAGRAAAAVAPSNESDWSEF
>Mature_694_residues
MRGFAGEFRVYEVGQFLNLEDPERYAYFFKRMDEIQAKYADTQKQLDAKIDAASPLKAEYDKLTDASARYFAANQQLRKL
YAEPDRAAAMEFSRKQSGEIRKELFASVDKLYAQQSKALGDMVSASASSFKLTSAVLLIGTLLMAALSVTFGWLIARSIT
SPIAKALGAIRAVSRGDLGVQVGKTSKDEIGQMLDATGGMTQMLRRFSDETARMSHLHAAEDITHRMPEDFPGVYGNLAT
GINTMIFEHLDAIVDAVRILNQYAQGDLSEDARRLPASRAVLHEAMDAAKASLLSINTEIKHLAQAAASGDFSARGDAQR
FKYDFAVMVSDLNSMMEVSDRNLGKLSQLLGAVADGDLTARMDGQFHGVFARLRDDANATTQRLTDIVGRIKHSTLAINT
AAGEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAEHARQANQLAIGAAGVASHGGNVVGQVVTTMSGIETSSK
KIAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKGLIDDSVSKVAEGSALVNQAG
STMAEIVSSVQRVTDIMSEISAASQEQSAGIEQVNQTVTHMDEATQQNAALVEEATAAARSMEEQAQQLTEAVAQFRLSA
ELEAVTRATPVVRHIAAKRPVAASMPASKPHAARPAGRAAAAVAPSNESDWSEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=311, Percent_Identity=60.128617363344, Blast_Score=305, Evalue=6e-84,
Organism=Escherichia coli, GI2367378, Length=305, Percent_Identity=62.6229508196721, Blast_Score=302, Evalue=6e-83,
Organism=Escherichia coli, GI1787690, Length=298, Percent_Identity=58.0536912751678, Blast_Score=287, Evalue=1e-78,
Organism=Escherichia coli, GI1788194, Length=270, Percent_Identity=60.7407407407407, Blast_Score=287, Evalue=2e-78,
Organism=Escherichia coli, GI1789453, Length=229, Percent_Identity=46.2882096069869, Blast_Score=192, Evalue=7e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 74133; Mature: 74133

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6302843; 11677609; 1660187; 8486661; 8831788 [H]