| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is luxQ [H]
Identifier: 77748572
GI number: 77748572
Start: 1455567
End: 1456439
Strand: Direct
Name: luxQ [H]
Synonym: XAC1273
Alternate gene names: 77748572
Gene position: 1455567-1456439 (Clockwise)
Preceding gene: 21242025
Following gene: 21242027
Centisome position: 28.12
GC content: 62.2
Gene sequence:
>873_bases ATGAATTCAACCACCGATCTGCCGGCAGCCGAGATGGCTGAACTTGAAAGCCTGCGCCAGCAGAACCAGGCCTTGCGCGA AGAGCTGGAAGAAACCAACCAAGGCGTGCTGGCCTTGTATGCCGAGCTCGACCAGCAGGCCGAACAGCTGCGCGACGTGT CCGAACTCAAGAGCCGCTTTCTGTCGTACATGAGCCACGAGTTCCGTACCCCGCTAGGCTCGATCCTGAGCATCACCCGG CTGCTGGAGGACGGCATGGACGGGCCGCTCAACGCCGAGCAGCTCAAGCAGGTGCGCTTTGTCAGCGGTTCGGCGCGTGA GCTCACCGAGATGGTGGACGACCTGCTGGACCTGGCCAAGATCGAGGCCGGGCGCATCACCATCTCGCCGGGCTGGTTCG ACCTGATGGACCTGTTCGCGGCGCTGCGCGGCATGTTCCGGCCGCTCACCGATATGGGCAGTACCACGCTGATCTTCGAG GATCCGCCGGTACTGCCGATGCTCTACACCGACGACAAGAAGCTGGCGCAGATCCTGCGCAATTTCATATCCAATGCGCT CAAGTTCACCCCGCAGGGACAGGTGCGCGTGTTTGCGCAGCTGGAAGGCGACAGCCATGTACGCTTTGGCGTGCAGGACA CTGGCATCGGCATTCCGGCCGAGCTTCACGAGGCCTTGTTCGAAGATTTCGTACAGGTGGACTCGCCGCTGCAAAAACGC CTGACCGGCACCGGCCTGGGGTTGTCGATCTGCAAACGGTTCGCCGAATTGCTGGGCGGCCGGGTGGGGATCAACAGCGT GGTCGGGCAGGGTTCTGAATTTTACGTGGTGCTGCCGGTGACCCTGGCAGCGGAGGAGACACGTGGGCAGTAA
Upstream 100 bases:
>100_bases TGTCGCGCCATCCACGCATCATTGCCGCAGTGCTGGCACGCGATTACGCGCGCGGCCGCGACGATTGCTGCGTGTTCGTC ATGCGCTTGGGAGGCATGCA
Downstream 100 bases:
>100_bases GCACCACATTCTGGTCGTCGACGACAACGCGGTGACGCGTTATTCGGTGCGGCGCGTGCTCGAACACCATCAGTTCGTGA TCGAAGAAGCCGGCACCGGG
Product: two-component system sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MNSTTDLPAAEMAELESLRQQNQALREELEETNQGVLALYAELDQQAEQLRDVSELKSRFLSYMSHEFRTPLGSILSITR LLEDGMDGPLNAEQLKQVRFVSGSARELTEMVDDLLDLAKIEAGRITISPGWFDLMDLFAALRGMFRPLTDMGSTTLIFE DPPVLPMLYTDDKKLAQILRNFISNALKFTPQGQVRVFAQLEGDSHVRFGVQDTGIGIPAELHEALFEDFVQVDSPLQKR LTGTGLGLSICKRFAELLGGRVGINSVVGQGSEFYVVLPVTLAAEETRGQ
Sequences:
>Translated_290_residues MNSTTDLPAAEMAELESLRQQNQALREELEETNQGVLALYAELDQQAEQLRDVSELKSRFLSYMSHEFRTPLGSILSITR LLEDGMDGPLNAEQLKQVRFVSGSARELTEMVDDLLDLAKIEAGRITISPGWFDLMDLFAALRGMFRPLTDMGSTTLIFE DPPVLPMLYTDDKKLAQILRNFISNALKFTPQGQVRVFAQLEGDSHVRFGVQDTGIGIPAELHEALFEDFVQVDSPLQKR LTGTGLGLSICKRFAELLGGRVGINSVVGQGSEFYVVLPVTLAAEETRGQ >Mature_290_residues MNSTTDLPAAEMAELESLRQQNQALREELEETNQGVLALYAELDQQAEQLRDVSELKSRFLSYMSHEFRTPLGSILSITR LLEDGMDGPLNAEQLKQVRFVSGSARELTEMVDDLLDLAKIEAGRITISPGWFDLMDLFAALRGMFRPLTDMGSTTLIFE DPPVLPMLYTDDKKLAQILRNFISNALKFTPQGQVRVFAQLEGDSHVRFGVQDTGIGIPAELHEALFEDFVQVDSPLQKR LTGTGLGLSICKRFAELLGGRVGINSVVGQGSEFYVVLPVTLAAEETRGQ
Specific function: At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=242, Percent_Identity=35.9504132231405, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI145693157, Length=258, Percent_Identity=34.4961240310078, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1789149, Length=284, Percent_Identity=31.3380281690141, Blast_Score=121, Evalue=6e-29, Organism=Escherichia coli, GI87081816, Length=285, Percent_Identity=34.3859649122807, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1788713, Length=264, Percent_Identity=28.7878787878788, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1786912, Length=245, Percent_Identity=25.3061224489796, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI87082128, Length=261, Percent_Identity=28.735632183908, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788393, Length=224, Percent_Identity=26.7857142857143, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1786600, Length=247, Percent_Identity=28.3400809716599, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1786783, Length=244, Percent_Identity=27.4590163934426, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1790436, Length=226, Percent_Identity=27.8761061946903, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1790300, Length=261, Percent_Identity=29.1187739463602, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1790346, Length=267, Percent_Identity=26.9662921348315, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1788549, Length=245, Percent_Identity=23.6734693877551, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322044, Length=75, Percent_Identity=45.3333333333333, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 32153; Mature: 32153
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTTDLPAAEMAELESLRQQNQALREELEETNQGVLALYAELDQQAEQLRDVSELKSRF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LSYMSHEFRTPLGSILSITRLLEDGMDGPLNAEQLKQVRFVSGSARELTEMVDDLLDLAK HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IEAGRITISPGWFDLMDLFAALRGMFRPLTDMGSTTLIFEDPPVLPMLYTDDKKLAQILR HCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCHHHHHHHH NFISNALKFTPQGQVRVFAQLEGDSHVRFGVQDTGIGIPAELHEALFEDFVQVDSPLQKR HHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH LTGTGLGLSICKRFAELLGGRVGINSVVGQGSEFYVVLPVTLAAEETRGQ HCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEEEEECHHCCCC >Mature Secondary Structure MNSTTDLPAAEMAELESLRQQNQALREELEETNQGVLALYAELDQQAEQLRDVSELKSRF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LSYMSHEFRTPLGSILSITRLLEDGMDGPLNAEQLKQVRFVSGSARELTEMVDDLLDLAK HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IEAGRITISPGWFDLMDLFAALRGMFRPLTDMGSTTLIFEDPPVLPMLYTDDKKLAQILR HCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCHHHHHHHH NFISNALKFTPQGQVRVFAQLEGDSHVRFGVQDTGIGIPAELHEALFEDFVQVDSPLQKR HHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH LTGTGLGLSICKRFAELLGGRVGINSVVGQGSEFYVVLPVTLAAEETRGQ HCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEEEEECHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA