| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21242025
Identifier: 21242025
GI number: 21242025
Start: 1454557
End: 1455570
Strand: Direct
Name: 21242025
Synonym: XAC1272
Alternate gene names: NA
Gene position: 1454557-1455570 (Clockwise)
Preceding gene: 21242024
Following gene: 77748572
Centisome position: 28.1
GC content: 68.24
Gene sequence:
>1014_bases ATGGAAGTGAACGTTACCGGCTTGGTGACCCGTTCGTTTCGTGTCGACGAAACCAGCCAGGTCGGACAGTCGCGCCGTGA GGCTACCGCCTTGGCGCAGATGCTCGCCTTCGATGAAGCCAGCTGTGGCCGGGTGGCACTGGTTGCCACCGAACTTGCCA CCAACATGGTCAAGCACGGGCGTGGCGGCTGCCTGCAGTTGTCCACGGTGGCCGCGCGCGACGGCGGCATGGGCGTGGAG CTGTGCGCCATCGATGACGGCCCGGGCTTCGCGCTTACAGACGGCCTGCGCGATGGCTATTCCACCGCCGGAACGCCGGG CACCGGTTTGGGTGCGATCAAGCGCCAGGCGCAGCTGCTGGATGCGTCTTCCGATGCCAAGGGTGCGATCGTGTTGGCAC GCGTGTTCGCCCAGCCACGCGCCGAGCTTGATCTGCCCTACGGCGCGCTACGCGTACCGCTGCATAACGAAGTGGTGTGC GGCGATGGCTGGCATTTGGCGATCGATGCGCAACGGGTGACCGTCAGCGTGATCGACGGCCTGGGCCACGGGCCAGACGC GGCCGATGCCGCCGATGCCGGCACGCGCGCGGCGGCGCTGGCCAGTGGCGAGCCCGGCGAGCGCATCGCGCGCCTGCATG CCGGCATGAGCGGCACGCGCGGTGGCGCGGCGGCGGTCATGCAGTTCGATGCCGGCAGCGGCCAGGTGCGCTTTGCCGGG GTGGGCAATATCGTCGCCTCGCTGTGCGATGGCGATGGGGTGCGCGGCATGCCCTCGCACCCTGGCATCGTCGGGGTTCA GTTCCGCAAGGCGCAACCGTTCGACTTTCCACACGCGGCCGGCAAGTTGCTGGTCATGCACAGCGACGGCCTGCAATCGC GCTGGACCCTGCGCGATCACCCGGGCCTGCTGTCGCGCCATCCACGCATCATTGCCGCAGTGCTGGCACGCGATTACGCG CGCGGCCGCGACGATTGCTGCGTGTTCGTCATGCGCTTGGGAGGCATGCAATGA
Upstream 100 bases:
>100_bases GCGGTGGCCTGGGGCTGGGACTGTCCGGCAGCCGGCGGCTGGTGGACGATTTCGTGCTCGACACAGCGCCGGGCGAAGGC ACGCGAATCACCATCACCAA
Downstream 100 bases:
>100_bases ATTCAACCACCGATCTGCCGGCAGCCGAGATGGCTGAACTTGAAAGCCTGCGCCAGCAGAACCAGGCCTTGCGCGAAGAG CTGGAAGAAACCAACCAAGG
Product: two-component system regulatory protein
Products: NA
Alternate protein names: Two-Component System Regulatory Protein; Anti-Sigma Regulatory Factor; RS-Related Protein; RS Protein; Stage II Sporulation E Family Protein; Anti-Sigma-Regulatory Factor; LigA Protein; Stage II Sporulation Protein E
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MEVNVTGLVTRSFRVDETSQVGQSRREATALAQMLAFDEASCGRVALVATELATNMVKHGRGGCLQLSTVAARDGGMGVE LCAIDDGPGFALTDGLRDGYSTAGTPGTGLGAIKRQAQLLDASSDAKGAIVLARVFAQPRAELDLPYGALRVPLHNEVVC GDGWHLAIDAQRVTVSVIDGLGHGPDAADAADAGTRAAALASGEPGERIARLHAGMSGTRGGAAAVMQFDAGSGQVRFAG VGNIVASLCDGDGVRGMPSHPGIVGVQFRKAQPFDFPHAAGKLLVMHSDGLQSRWTLRDHPGLLSRHPRIIAAVLARDYA RGRDDCCVFVMRLGGMQ
Sequences:
>Translated_337_residues MEVNVTGLVTRSFRVDETSQVGQSRREATALAQMLAFDEASCGRVALVATELATNMVKHGRGGCLQLSTVAARDGGMGVE LCAIDDGPGFALTDGLRDGYSTAGTPGTGLGAIKRQAQLLDASSDAKGAIVLARVFAQPRAELDLPYGALRVPLHNEVVC GDGWHLAIDAQRVTVSVIDGLGHGPDAADAADAGTRAAALASGEPGERIARLHAGMSGTRGGAAAVMQFDAGSGQVRFAG VGNIVASLCDGDGVRGMPSHPGIVGVQFRKAQPFDFPHAAGKLLVMHSDGLQSRWTLRDHPGLLSRHPRIIAAVLARDYA RGRDDCCVFVMRLGGMQ >Mature_337_residues MEVNVTGLVTRSFRVDETSQVGQSRREATALAQMLAFDEASCGRVALVATELATNMVKHGRGGCLQLSTVAARDGGMGVE LCAIDDGPGFALTDGLRDGYSTAGTPGTGLGAIKRQAQLLDASSDAKGAIVLARVFAQPRAELDLPYGALRVPLHNEVVC GDGWHLAIDAQRVTVSVIDGLGHGPDAADAADAGTRAAALASGEPGERIARLHAGMSGTRGGAAAVMQFDAGSGQVRFAG VGNIVASLCDGDGVRGMPSHPGIVGVQFRKAQPFDFPHAAGKLLVMHSDGLQSRWTLRDHPGLLSRHPRIIAAVLARDYA RGRDDCCVFVMRLGGMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35000; Mature: 35000
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVNVTGLVTRSFRVDETSQVGQSRREATALAQMLAFDEASCGRVALVATELATNMVKHG CEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHC RGGCLQLSTVAARDGGMGVELCAIDDGPGFALTDGLRDGYSTAGTPGTGLGAIKRQAQLL CCCEEEEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH DASSDAKGAIVLARVFAQPRAELDLPYGALRVPLHNEVVCGDGWHLAIDAQRVTVSVIDG CCCCCCCCCEEEEEHHHCCCCCCCCCCCEEECCCCCCEEECCCEEEEEECCEEEEEEECC LGHGPDAADAADAGTRAAALASGEPGERIARLHAGMSGTRGGAAAVMQFDAGSGQVRFAG CCCCCCCCCHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEE VGNIVASLCDGDGVRGMPSHPGIVGVQFRKAQPFDFPHAAGKLLVMHSDGLQSRWTLRDH HHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEECCC PGLLSRHPRIIAAVLARDYARGRDDCCVFVMRLGGMQ CCHHHCCHHHHHHHHHHHHHCCCCHHHHHEEHHCCCC >Mature Secondary Structure MEVNVTGLVTRSFRVDETSQVGQSRREATALAQMLAFDEASCGRVALVATELATNMVKHG CEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHC RGGCLQLSTVAARDGGMGVELCAIDDGPGFALTDGLRDGYSTAGTPGTGLGAIKRQAQLL CCCEEEEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH DASSDAKGAIVLARVFAQPRAELDLPYGALRVPLHNEVVCGDGWHLAIDAQRVTVSVIDG CCCCCCCCCEEEEEHHHCCCCCCCCCCCEEECCCCCCEEECCCEEEEEECCEEEEEEECC LGHGPDAADAADAGTRAAALASGEPGERIARLHAGMSGTRGGAAAVMQFDAGSGQVRFAG CCCCCCCCCHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEE VGNIVASLCDGDGVRGMPSHPGIVGVQFRKAQPFDFPHAAGKLLVMHSDGLQSRWTLRDH HHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEECCC PGLLSRHPRIIAAVLARDYARGRDDCCVFVMRLGGMQ CCHHHCCHHHHHHHHHHHHHCCCCHHHHHEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA