| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748557
Identifier: 77748557
GI number: 77748557
Start: 1093770
End: 1095467
Strand: Direct
Name: 77748557
Synonym: XAC0930
Alternate gene names: NA
Gene position: 1093770-1095467 (Clockwise)
Preceding gene: 77748556
Following gene: 21241703
Centisome position: 21.13
GC content: 67.2
Gene sequence:
>1698_bases ATGCCGTATCACTCAGTAGGCGTACTGCGCCGCGTTGCATTCGTCTGTGCGTTGTCATGCACGTTTCATGCCGCTGCTGG CGAGGTCAATCTGCAAGGATTGAATTCCAGTAACACCCATCAGCGCTTCATCGTCAGCTACAAGAACAGCGTCGGCAGCA GCCGGGCGACTGGGTTGTCTGCGCCATGGGGCGACATCGCGCGTGCCGTGCCGCAAGCGCGCGGGAAGGCGCTGGGCCTG TCGGCCACGCGCCGGCTCAGTGGCGGGCCGATGTTGCTGGTGGCAGACCGCAAGCTGGACCGCGTGGATTCGGAAAGCCT GATGCGGCGCCTTGCCGCCGACCCGGCGGTCAAACGCGTGGAAGTGGACATCCTGATGCGGCCATTGCTGGTTCCCAACG ACCCGGGCGTGCCGCAGCAGTGGGCGATGGGCGCGACCGCCGCCAGCCTCAACATCCGTCCGGCCTGGGACCGTTCCACC GGCAAGGGCATCGTGGTGGCGGTGATCGACACTGGCATCACCAATCATCCGGACCTGGCAGCCAATGTGCTGCCCGGCTA CGACTTCATCGTTGATCCGGCCACTGCGCGCGATGGCACTGCGCGCGATGCGAACGCCGCCGACCAAGGCGACTGGGCCG CGGCCAACGAATGCGGGCCCGGAGCGTCGGCGTCCAATTCCAGTTGGCATGGCACGCACGTGGCCGGCATCGTGGCGGCG GTGGGCAACAACGCGGTGGGCGTGGTCGGTACCGCGTTCAACGCCAAGATCCTGCCGTTGCGGGTGCTGGGCCGCTGCGG CGGCTACATGTCCGATATCGCCGATGCGATCGTGTGGGCGTCCGGCGGCAAGGTCACTGGCGTGCCGGCCAACCCGAATC CGGCCACGGTGATCAATCTGTCGTTGGGCGGAGCGGGCACCTGCTCGGCGACGTTGAACAACGCCATCACCGCAGCGGTC ACGCGCGGCAGCGCGGTGGTCGTGGCCGCCGGCAACAGCAATATGGACGTCTCCACCAGCGTGCCGGCCAATTGCGCCAA CGTGATCGCCGTGGCCGCCACCACCTCGGCCGGCGCCAAGGCCAGCTTCTCCAACTTCGGCAAGGGCGTGGATATCGCCG CGCCCGGGCAATCGATCGTGTCCACGCTCAATACCGGAACCACGGCACCGGGCAATCCGGCATATGCGGTGTATAGCGGC ACCTCGATGGCTGCGCCGCACGTGGCTGGCGTGGTGGCGCTGATGCAGTCGGTGGCCCTGAATCCGCTGACGCCGGCAAC AGTGAAAGCCCTGCTCAAGGCCAGCGCGCGGCCCATGCCGGTGGCCTGCACGCAGGGGTGCGGGGCCGGGCTGGTGAATG CCGATGGCGCGGTGGCGGCGGTGATCGAGTCGACCACCTTGAGCAGGAATGTGGCACGCACCGGGCTGAGCGCAGCGCTT TCCGATTCGCTGTATTACCAGGTCAATGTGCCGGCCGGCACCCGTTCGCTCAAGGTCACGCTCGCCGATGGCAGCGGCAA CGCCGACCTTTCGGTACGGGCCGGAGCGTTACCGACCGACGCCGCGTACAGCTGCCGCAGCATGTTGCCGGGCAATGGCG ACAGCTGCACGCTGGCCGCGCCGGCTGCGGGCGTCTATTACGTGCGCTTGAAGGCAACGCTGGGCTTTTCCGGAGTCAGC GTCACTGCGGCGTATTGA
Upstream 100 bases:
>100_bases GCATGCAACATCTGCATGCACGCGCATCGGGCACGGCGCAGCGCACTGGCGTCAGCGCGTTGCCAACCGGGTTGCCAGAT CCTTGGGGAGGGATGGAGTC
Downstream 100 bases:
>100_bases GTGGTTCCGGCGCGGTGGTGCTGCCGTGTCCAGAGGCGCTGCTGCCTGCTCTAGTGCGGCAGTGCTGCATGCGTGCAATG CGGAGACATCGGTGGAAGAT
Product: extracellular protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MPYHSVGVLRRVAFVCALSCTFHAAAGEVNLQGLNSSNTHQRFIVSYKNSVGSSRATGLSAPWGDIARAVPQARGKALGL SATRRLSGGPMLLVADRKLDRVDSESLMRRLAADPAVKRVEVDILMRPLLVPNDPGVPQQWAMGATAASLNIRPAWDRST GKGIVVAVIDTGITNHPDLAANVLPGYDFIVDPATARDGTARDANAADQGDWAAANECGPGASASNSSWHGTHVAGIVAA VGNNAVGVVGTAFNAKILPLRVLGRCGGYMSDIADAIVWASGGKVTGVPANPNPATVINLSLGGAGTCSATLNNAITAAV TRGSAVVVAAGNSNMDVSTSVPANCANVIAVAATTSAGAKASFSNFGKGVDIAAPGQSIVSTLNTGTTAPGNPAYAVYSG TSMAAPHVAGVVALMQSVALNPLTPATVKALLKASARPMPVACTQGCGAGLVNADGAVAAVIESTTLSRNVARTGLSAAL SDSLYYQVNVPAGTRSLKVTLADGSGNADLSVRAGALPTDAAYSCRSMLPGNGDSCTLAAPAAGVYYVRLKATLGFSGVS VTAAY
Sequences:
>Translated_565_residues MPYHSVGVLRRVAFVCALSCTFHAAAGEVNLQGLNSSNTHQRFIVSYKNSVGSSRATGLSAPWGDIARAVPQARGKALGL SATRRLSGGPMLLVADRKLDRVDSESLMRRLAADPAVKRVEVDILMRPLLVPNDPGVPQQWAMGATAASLNIRPAWDRST GKGIVVAVIDTGITNHPDLAANVLPGYDFIVDPATARDGTARDANAADQGDWAAANECGPGASASNSSWHGTHVAGIVAA VGNNAVGVVGTAFNAKILPLRVLGRCGGYMSDIADAIVWASGGKVTGVPANPNPATVINLSLGGAGTCSATLNNAITAAV TRGSAVVVAAGNSNMDVSTSVPANCANVIAVAATTSAGAKASFSNFGKGVDIAAPGQSIVSTLNTGTTAPGNPAYAVYSG TSMAAPHVAGVVALMQSVALNPLTPATVKALLKASARPMPVACTQGCGAGLVNADGAVAAVIESTTLSRNVARTGLSAAL SDSLYYQVNVPAGTRSLKVTLADGSGNADLSVRAGALPTDAAYSCRSMLPGNGDSCTLAAPAAGVYYVRLKATLGFSGVS VTAAY >Mature_564_residues PYHSVGVLRRVAFVCALSCTFHAAAGEVNLQGLNSSNTHQRFIVSYKNSVGSSRATGLSAPWGDIARAVPQARGKALGLS ATRRLSGGPMLLVADRKLDRVDSESLMRRLAADPAVKRVEVDILMRPLLVPNDPGVPQQWAMGATAASLNIRPAWDRSTG KGIVVAVIDTGITNHPDLAANVLPGYDFIVDPATARDGTARDANAADQGDWAAANECGPGASASNSSWHGTHVAGIVAAV GNNAVGVVGTAFNAKILPLRVLGRCGGYMSDIADAIVWASGGKVTGVPANPNPATVINLSLGGAGTCSATLNNAITAAVT RGSAVVVAAGNSNMDVSTSVPANCANVIAVAATTSAGAKASFSNFGKGVDIAAPGQSIVSTLNTGTTAPGNPAYAVYSGT SMAAPHVAGVVALMQSVALNPLTPATVKALLKASARPMPVACTQGCGAGLVNADGAVAAVIESTTLSRNVARTGLSAALS DSLYYQVNVPAGTRSLKVTLADGSGNADLSVRAGALPTDAAYSCRSMLPGNGDSCTLAAPAAGVYYVRLKATLGFSGVSV TAAY
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI4505579, Length=360, Percent_Identity=28.6111111111111, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI20336180, Length=371, Percent_Identity=28.3018867924528, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI4505577, Length=371, Percent_Identity=28.3018867924528, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI20336190, Length=410, Percent_Identity=27.3170731707317, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI27894285, Length=410, Percent_Identity=27.3170731707317, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI20336188, Length=410, Percent_Identity=27.3170731707317, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI76443679, Length=368, Percent_Identity=27.9891304347826, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI20336184, Length=371, Percent_Identity=28.3018867924528, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI20336186, Length=372, Percent_Identity=28.2258064516129, Blast_Score=87, Evalue=5e-17, Organism=Homo sapiens, GI20336182, Length=371, Percent_Identity=28.3018867924528, Blast_Score=87, Evalue=5e-17, Organism=Caenorhabditis elegans, GI71983555, Length=400, Percent_Identity=26.25, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25141268, Length=405, Percent_Identity=26.1728395061728, Blast_Score=86, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6320775, Length=346, Percent_Identity=29.1907514450867, Blast_Score=108, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6324576, Length=350, Percent_Identity=27.7142857142857, Blast_Score=100, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6319893, Length=267, Percent_Identity=30.3370786516854, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI281360987, Length=356, Percent_Identity=28.6516853932584, Blast_Score=93, Evalue=6e-19, Organism=Drosophila melanogaster, GI24642494, Length=356, Percent_Identity=28.6516853932584, Blast_Score=93, Evalue=6e-19, Organism=Drosophila melanogaster, GI24642490, Length=356, Percent_Identity=28.6516853932584, Blast_Score=93, Evalue=6e-19, Organism=Drosophila melanogaster, GI45555723, Length=356, Percent_Identity=28.6516853932584, Blast_Score=93, Evalue=6e-19, Organism=Drosophila melanogaster, GI24642492, Length=356, Percent_Identity=28.6516853932584, Blast_Score=93, Evalue=6e-19, Organism=Drosophila melanogaster, GI24642488, Length=359, Percent_Identity=28.133704735376, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI24642484, Length=359, Percent_Identity=28.133704735376, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI24642486, Length=359, Percent_Identity=28.133704735376, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI281360985, Length=164, Percent_Identity=34.7560975609756, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI24650056, Length=373, Percent_Identity=23.3243967828418, Blast_Score=69, Evalue=9e-12, Organism=Drosophila melanogaster, GI45553515, Length=373, Percent_Identity=23.3243967828418, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24650058, Length=373, Percent_Identity=23.3243967828418, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24650060, Length=373, Percent_Identity=23.3243967828418, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI45553513, Length=373, Percent_Identity=23.3243967828418, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI17864552, Length=373, Percent_Identity=23.3243967828418, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 56745; Mature: 56614
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYHSVGVLRRVAFVCALSCTFHAAAGEVNLQGLNSSNTHQRFIVSYKNSVGSSRATGLS CCCHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCC APWGDIARAVPQARGKALGLSATRRLSGGPMLLVADRKLDRVDSESLMRRLAADPAVKRV CCHHHHHHHHHHHCCCEECCCHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHEE EVDILMRPLLVPNDPGVPQQWAMGATAASLNIRPAWDRSTGKGIVVAVIDTGITNHPDLA EEEEHCCCEECCCCCCCCHHHHCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCH ANVLPGYDFIVDPATARDGTARDANAADQGDWAAANECGPGASASNSSWHGTHVAGIVAA HHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VGNNAVGVVGTAFNAKILPLRVLGRCGGYMSDIADAIVWASGGKVTGVPANPNPATVINL HCCCCEEEEEECCCCEEEHHHHHHHCCCHHHHHHHHEEECCCCEEEECCCCCCCCEEEEE SLGGAGTCSATLNNAITAAVTRGSAVVVAAGNSNMDVSTSVPANCANVIAVAATTSAGAK ECCCCCCCHHHHCCCEEEEEECCCEEEEEECCCCCEEECCCCCCCCCEEEEEEECCCCCC ASFSNFGKGVDIAAPGQSIVSTLNTGTTAPGNPAYAVYSGTSMAAPHVAGVVALMQSVAL CCHHHCCCCCEECCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCC NPLTPATVKALLKASARPMPVACTQGCGAGLVNADGAVAAVIESTTLSRNVARTGLSAAL CCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHH SDSLYYQVNVPAGTRSLKVTLADGSGNADLSVRAGALPTDAAYSCRSMLPGNGDSCTLAA CCCEEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCEEEEEC PAAGVYYVRLKATLGFSGVSVTAAY CCCCEEEEEEEEEECCCCEEEEEEC >Mature Secondary Structure PYHSVGVLRRVAFVCALSCTFHAAAGEVNLQGLNSSNTHQRFIVSYKNSVGSSRATGLS CCHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCC APWGDIARAVPQARGKALGLSATRRLSGGPMLLVADRKLDRVDSESLMRRLAADPAVKRV CCHHHHHHHHHHHCCCEECCCHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHEE EVDILMRPLLVPNDPGVPQQWAMGATAASLNIRPAWDRSTGKGIVVAVIDTGITNHPDLA EEEEHCCCEECCCCCCCCHHHHCCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCH ANVLPGYDFIVDPATARDGTARDANAADQGDWAAANECGPGASASNSSWHGTHVAGIVAA HHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VGNNAVGVVGTAFNAKILPLRVLGRCGGYMSDIADAIVWASGGKVTGVPANPNPATVINL HCCCCEEEEEECCCCEEEHHHHHHHCCCHHHHHHHHEEECCCCEEEECCCCCCCCEEEEE SLGGAGTCSATLNNAITAAVTRGSAVVVAAGNSNMDVSTSVPANCANVIAVAATTSAGAK ECCCCCCCHHHHCCCEEEEEECCCEEEEEECCCCCEEECCCCCCCCCEEEEEEECCCCCC ASFSNFGKGVDIAAPGQSIVSTLNTGTTAPGNPAYAVYSGTSMAAPHVAGVVALMQSVAL CCHHHCCCCCEECCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCC NPLTPATVKALLKASARPMPVACTQGCGAGLVNADGAVAAVIESTTLSRNVARTGLSAAL CCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHH SDSLYYQVNVPAGTRSLKVTLADGSGNADLSVRAGALPTDAAYSCRSMLPGNGDSCTLAA CCCEEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCEEEEEC PAAGVYYVRLKATLGFSGVSVTAAY CCCCEEEEEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]