| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748556
Identifier: 77748556
GI number: 77748556
Start: 1091789
End: 1093429
Strand: Direct
Name: 77748556
Synonym: XAC0929
Alternate gene names: NA
Gene position: 1091789-1093429 (Clockwise)
Preceding gene: 21241698
Following gene: 77748557
Centisome position: 21.1
GC content: 68.37
Gene sequence:
>1641_bases ATGACGTCAGGGAACGCTGCCACCATCGCTTCAACCCCATTTGCGATACCTCGCCCAGGTCTGCCGTTTCGGCAGGCGCA GGCGATGTGTTGCCACTTGGCCGGAATGGACGCCGGTCAGTCGCTCCGACGGGCCTGGCGCCCGTGCAGTTTCCGGCCCC GAACCGCAGCCTGCGGCAAAGGGCAGGCCCTCTCGCCGCAGCTGCGGCACCTCTCCAATAAGGAACGATCGATGTCCAAT GTGTCGCAACGTCGTGCGCCCACGCGCGCGCTGGTAGTCCTGGGTGTTTCCGCGTTGACCTCGCTGCTGGCCGTGCCGGC ATTCGCCGGTCAGGTCAATCTGTCCGGGTTGGATGCGCAGCCCACCCTGGACCGCTTCATCGTCAAATACAAGGACGGTT CCAGTGCGGCGGTCAGCCCCACCTCGATGCGCGCATCGCTCAATTCCGTCGCCGGTGCGATGCCGGCACGCGCCGGCCGT GCGCTGGGCCTGAACCACGTGCGCCGCACGGCGCTGGGTTCGGAAGTGCTCAAGACCGACCGTGGCCTGGACCGCGCCGA CGCCGAAACGCTGATGCGCCGCATTGCTGCCGACCCCAGCGTGGACTATGTGGAAGTCGACCAGATCATGTACCCGGTGC TGACCCCGAACGACACGCGCCTGTCCGAACAGTGGGGCTTCGGCACCTCTTCCTCCAGCATCAACGTGCGCCCGGCCTGG GACACCGCCACCGGCACCGGCGTGGTGGTGGCGGTGATCGACACCGGCATCACCAGCCATCCTGACCTCAACGCCAACGT GCTGCCGGGTTACGACTTCATCAGCGATGCCACGCGTGCACGCGACAACAACGGGCGTGACAGCAATCCGGCCGACCAGG GCGACTGGACCACGGCCGGCCAGTGCGGCAGCGGCACCTCGGCCGCCAATTCCAGCTGGCACGGCACGCATGTGGCCGGC ACCATCGCGGCGGTGACCAACAACAGCACCGGCGTGGCCGGTACCGCGTTCAACGCGCGCATCGTGCCGATCCGTGCGCT GGGCGCATGCGGCGGCGCCACGTCCGATATCGTCGATGCGATCGTGTGGGCCTCCGGCGGCACCGTGTCCGGCGTGCCGG CCAATGCCAACCCGGCCGAAGTGATCAACATGTCGCTGGGCGGCAGCGGCAGCTGCTCGAGCAGTTACCAGAATGCGATC AACAGCGCGGTGTCGCGCGGCACCACCGTGGTGGTGGCGGCCGGCAACAGCAATGCCAACGTGGCCAACTTCACCCCGGC CAGCTGCGCCAACGTGATTTCGGTGGCGTCGATCACCTCGGCCGGGGCGCGTTCGAGCTTCTCCAACTACGGCACCGGCA TCGACATCTCCGCGCCGGGTTCGGCGATCCTGTCGACCTTGAACAGCGGCACCACCACGCCGGGTTCGGCCAGCTACGCC AGCTACAACGGCACCTCGATGGCGGCCCCGCACGTGGCCGGCGTGGTGGCGCTGGTGCAGTCGGTCGCCAGCCGTCCGCT GACGCCTGCGGCGGTGGAAACGCTGCTGAAGAACACTGCACGTCCGCTGCCGGGCGCCTGCTCGGGCGGCTGCGGCGCGG GCATCGTCAACGCGGCCGGCGCGGTCAGCCAGACCCCGTAA
Upstream 100 bases:
>100_bases CGGGAACCTATTACGTGCGGATCAAGGCTTACAGCACGTTCTCCGGCGTGACCCTGACCGCCAGCTACTAAACGCTGGAT CGCTGCACGCGTTCCCTGGC
Downstream 100 bases:
>100_bases ACCTGCGCCGACGACCGCGATGCCGGCACGCAGCCGGCATCGCGTCGGGCCTTTCCCGACGCCCGTGTCGGTGGTTTGAA ACCTGCACTGCCCCGCTCTA
Product: extracellular protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MTSGNAATIASTPFAIPRPGLPFRQAQAMCCHLAGMDAGQSLRRAWRPCSFRPRTAACGKGQALSPQLRHLSNKERSMSN VSQRRAPTRALVVLGVSALTSLLAVPAFAGQVNLSGLDAQPTLDRFIVKYKDGSSAAVSPTSMRASLNSVAGAMPARAGR ALGLNHVRRTALGSEVLKTDRGLDRADAETLMRRIAADPSVDYVEVDQIMYPVLTPNDTRLSEQWGFGTSSSSINVRPAW DTATGTGVVVAVIDTGITSHPDLNANVLPGYDFISDATRARDNNGRDSNPADQGDWTTAGQCGSGTSAANSSWHGTHVAG TIAAVTNNSTGVAGTAFNARIVPIRALGACGGATSDIVDAIVWASGGTVSGVPANANPAEVINMSLGGSGSCSSSYQNAI NSAVSRGTTVVVAAGNSNANVANFTPASCANVISVASITSAGARSSFSNYGTGIDISAPGSAILSTLNSGTTTPGSASYA SYNGTSMAAPHVAGVVALVQSVASRPLTPAAVETLLKNTARPLPGACSGGCGAGIVNAAGAVSQTP
Sequences:
>Translated_546_residues MTSGNAATIASTPFAIPRPGLPFRQAQAMCCHLAGMDAGQSLRRAWRPCSFRPRTAACGKGQALSPQLRHLSNKERSMSN VSQRRAPTRALVVLGVSALTSLLAVPAFAGQVNLSGLDAQPTLDRFIVKYKDGSSAAVSPTSMRASLNSVAGAMPARAGR ALGLNHVRRTALGSEVLKTDRGLDRADAETLMRRIAADPSVDYVEVDQIMYPVLTPNDTRLSEQWGFGTSSSSINVRPAW DTATGTGVVVAVIDTGITSHPDLNANVLPGYDFISDATRARDNNGRDSNPADQGDWTTAGQCGSGTSAANSSWHGTHVAG TIAAVTNNSTGVAGTAFNARIVPIRALGACGGATSDIVDAIVWASGGTVSGVPANANPAEVINMSLGGSGSCSSSYQNAI NSAVSRGTTVVVAAGNSNANVANFTPASCANVISVASITSAGARSSFSNYGTGIDISAPGSAILSTLNSGTTTPGSASYA SYNGTSMAAPHVAGVVALVQSVASRPLTPAAVETLLKNTARPLPGACSGGCGAGIVNAAGAVSQTP >Mature_545_residues TSGNAATIASTPFAIPRPGLPFRQAQAMCCHLAGMDAGQSLRRAWRPCSFRPRTAACGKGQALSPQLRHLSNKERSMSNV SQRRAPTRALVVLGVSALTSLLAVPAFAGQVNLSGLDAQPTLDRFIVKYKDGSSAAVSPTSMRASLNSVAGAMPARAGRA LGLNHVRRTALGSEVLKTDRGLDRADAETLMRRIAADPSVDYVEVDQIMYPVLTPNDTRLSEQWGFGTSSSSINVRPAWD TATGTGVVVAVIDTGITSHPDLNANVLPGYDFISDATRARDNNGRDSNPADQGDWTTAGQCGSGTSAANSSWHGTHVAGT IAAVTNNSTGVAGTAFNARIVPIRALGACGGATSDIVDAIVWASGGTVSGVPANANPAEVINMSLGGSGSCSSSYQNAIN SAVSRGTTVVVAAGNSNANVANFTPASCANVISVASITSAGARSSFSNYGTGIDISAPGSAILSTLNSGTTTPGSASYAS YNGTSMAAPHVAGVVALVQSVASRPLTPAAVETLLKNTARPLPGACSGGCGAGIVNAAGAVSQTP
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI4505579, Length=358, Percent_Identity=27.6536312849162, Blast_Score=88, Evalue=3e-17, Organism=Homo sapiens, GI20336180, Length=382, Percent_Identity=28.2722513089005, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI4505577, Length=382, Percent_Identity=28.2722513089005, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI20336182, Length=374, Percent_Identity=27.2727272727273, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI20336184, Length=374, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI20336188, Length=374, Percent_Identity=27.2727272727273, Blast_Score=83, Evalue=8e-16, Organism=Homo sapiens, GI20336190, Length=374, Percent_Identity=27.2727272727273, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI20336186, Length=374, Percent_Identity=27.2727272727273, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI27894285, Length=374, Percent_Identity=27.2727272727273, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI299523015, Length=324, Percent_Identity=27.7777777777778, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI76443679, Length=369, Percent_Identity=26.2872628726287, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI20336246, Length=324, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=9e-13, Organism=Caenorhabditis elegans, GI71983555, Length=337, Percent_Identity=27.893175074184, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI25141268, Length=337, Percent_Identity=27.893175074184, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71988321, Length=350, Percent_Identity=27.1428571428571, Blast_Score=66, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71988308, Length=350, Percent_Identity=27.1428571428571, Blast_Score=66, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71988315, Length=350, Percent_Identity=27.1428571428571, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71988297, Length=350, Percent_Identity=27.1428571428571, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71988301, Length=359, Percent_Identity=26.7409470752089, Blast_Score=65, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71988312, Length=350, Percent_Identity=27.1428571428571, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6320775, Length=325, Percent_Identity=32, Blast_Score=113, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6324576, Length=344, Percent_Identity=28.1976744186047, Blast_Score=101, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6319893, Length=278, Percent_Identity=29.8561151079137, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI281360987, Length=361, Percent_Identity=28.5318559556787, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24642494, Length=361, Percent_Identity=28.5318559556787, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24642490, Length=361, Percent_Identity=28.5318559556787, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI45555723, Length=361, Percent_Identity=28.5318559556787, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24642492, Length=361, Percent_Identity=28.5318559556787, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24642488, Length=364, Percent_Identity=28.2967032967033, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI24642484, Length=364, Percent_Identity=28.2967032967033, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI24642486, Length=364, Percent_Identity=28.2967032967033, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI24650056, Length=335, Percent_Identity=26.2686567164179, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24650058, Length=335, Percent_Identity=25.9701492537313, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24650060, Length=335, Percent_Identity=25.9701492537313, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI45553513, Length=335, Percent_Identity=25.9701492537313, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI45553515, Length=335, Percent_Identity=25.9701492537313, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI17864552, Length=357, Percent_Identity=25.7703081232493, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI281360985, Length=168, Percent_Identity=35.1190476190476, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 55202; Mature: 55071
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGNAATIASTPFAIPRPGLPFRQAQAMCCHLAGMDAGQSLRRAWRPCSFRPRTAACGK CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCC GQALSPQLRHLSNKERSMSNVSQRRAPTRALVVLGVSALTSLLAVPAFAGQVNLSGLDAQ CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCC PTLDRFIVKYKDGSSAAVSPTSMRASLNSVAGAMPARAGRALGLNHVRRTALGSEVLKTD CCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHH RGLDRADAETLMRRIAADPSVDYVEVDQIMYPVLTPNDTRLSEQWGFGTSSSSINVRPAW CCCCHHHHHHHHHHHHCCCCCCEEEHHHHEECCCCCCCCCCHHHCCCCCCCCCEEEEECC DTATGTGVVVAVIDTGITSHPDLNANVLPGYDFISDATRARDNNGRDSNPADQGDWTTAG CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC QCGSGTSAANSSWHGTHVAGTIAAVTNNSTGVAGTAFNARIVPIRALGACGGATSDIVDA CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECCCEEEEEEEEECCCCCCHHHHHHH IVWASGGTVSGVPANANPAEVINMSLGGSGSCSSSYQNAINSAVSRGTTVVVAAGNSNAN HHHCCCCEECCCCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC VANFTPASCANVISVASITSAGARSSFSNYGTGIDISAPGSAILSTLNSGTTTPGSASYA CCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCCCC SYNGTSMAAPHVAGVVALVQSVASRPLTPAAVETLLKNTARPLPGACSGGCGAGIVNAAG CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCC AVSQTP CCCCCC >Mature Secondary Structure TSGNAATIASTPFAIPRPGLPFRQAQAMCCHLAGMDAGQSLRRAWRPCSFRPRTAACGK CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCC GQALSPQLRHLSNKERSMSNVSQRRAPTRALVVLGVSALTSLLAVPAFAGQVNLSGLDAQ CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCC PTLDRFIVKYKDGSSAAVSPTSMRASLNSVAGAMPARAGRALGLNHVRRTALGSEVLKTD CCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHH RGLDRADAETLMRRIAADPSVDYVEVDQIMYPVLTPNDTRLSEQWGFGTSSSSINVRPAW CCCCHHHHHHHHHHHHCCCCCCEEEHHHHEECCCCCCCCCCHHHCCCCCCCCCEEEEECC DTATGTGVVVAVIDTGITSHPDLNANVLPGYDFISDATRARDNNGRDSNPADQGDWTTAG CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC QCGSGTSAANSSWHGTHVAGTIAAVTNNSTGVAGTAFNARIVPIRALGACGGATSDIVDA CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECCCEEEEEEEEECCCCCCHHHHHHH IVWASGGTVSGVPANANPAEVINMSLGGSGSCSSSYQNAINSAVSRGTTVVVAAGNSNAN HHHCCCCEECCCCCCCCHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC VANFTPASCANVISVASITSAGARSSFSNYGTGIDISAPGSAILSTLNSGTTTPGSASYA CCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCHHHHHHHHHCCCCCCCCCCCC SYNGTSMAAPHVAGVVALVQSVASRPLTPAAVETLLKNTARPLPGACSGGCGAGIVNAAG CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCC AVSQTP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]