| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is treA
Identifier: 77748541
GI number: 77748541
Start: 708731
End: 710404
Strand: Reverse
Name: treA
Synonym: XAC0604
Alternate gene names: 77748541
Gene position: 710404-708731 (Counterclockwise)
Preceding gene: 21241376
Following gene: 21241374
Centisome position: 13.73
GC content: 66.91
Gene sequence:
>1674_bases ATGAGTTCTGCCGCGCCCCCGTGCTGCACGTCGCTGCTTGGCCTGTCGCTGAGCATGTTTGTTGCGCCGGGCACGCTGAC CGCCGCGCCGCTGGACGCTCCGGTCGTCAATGCGCCGGCGCCCACGCCGCCCACGCCCGACCTGGCCTACCCGGAACTGT TTCAGGCCGTGCAGCGCGGTGAGTTGTTCGATGACCAGAAGCACTTTGTCGACTTCCTGCCGCTGCGCGACCCGGCGCTG ATCAACGCCGACTATCTGGCCCAGCACGATCACCCCGGCTTCGATCTGCGCAAGTTCGTGGACGCCAATTTCGAAGAATC GCCGCCGGTGCAGACCGATGCGATCCGCCAGGACACCGCGCTGCGCGAGCACATCGACCTGCTGTGGCCCAAGCTGGTGC GCAGCCAGAACCACGTGCCGCCGCACAGCAGCCTGCTGGCGCTGCCGCATCCGTATGTGGTGCCGGGCGGACGCTTCCGC GAGGTGTATTACTGGGATTCCTACTTCACCATGCTGGGCCTGGTGAAGAGCGGCGAAACCACGCTCAGCCGCCAGATGCT GGACAACTTTGCCTACCTGATCGACACCTACGGGCATATTCCCAACGGCAACCGCACCTACTACCTCAGCCGCTCGCAGC CGCCGTTCTTCTCCTACATGGTGGAGCTGCAGGCCGGCGTGGAAGGCGAGGCGGTATATCAGCGCTACCTGCCGCAGCTG CAAAAGGAATATGCCTACTGGATGCAGGGCAGCGATGACCTGCAGCCCGGCCAGGCCGCGCGCCACGTGGTGCGTCTGGC CGATGGCAGCGTGCTCAACCGCTATTGGGACGAGCGCGACACCCCGCGCCCGGAAGCCTGGCTGCACGACACCCGCACCG CCGCAGAAGTGACCGACCGCCCGGCCGCCGAGGTCTACCGCGACCTGCGTGCCGGCGCCGAAAGTGGCTGGGACTACACC AGCCGCTGGCTGGCCGACGGCCAGAACCTGCGCACCATCCGTACCACTGCCATCCTCCCGATCGACCTCAACAGCCTGCT CTACCACCTGGAGCGCACGCTGGCGCTGGCCTGCGCGCAACCTGGCGCGGAGTGCACCCGCGATTACGCCGCACTTGCAC AGCAGCGCAAGCAGGCCATCGACGCGCATCTGTGGAATACCGCCGGCTACTACGCCGACTACGACTGGCAGACGCGTACG CTGAGCAACCAGGTCACCGCCGCTGCGCTATACCCGCTGTTTGCCGGCCTGGCCTCGGACGATCACGCCAAGCGCACCGC CAGCACCGTGCGTAAAACGCTACTGCGTCCGGGCGGACTGGCCACCACCGCAGTGAAGACCGGTCAGCAGTGGGATGAGC CCAACGGCTGGGCGCCGCTGCAATGGGTGGCTGTGGATGGCCTGCGGCGCTACGGCGAAGACGCGCTGGCACGCACCATT GGCGAACGTTTTCTGGCTCAAGTGCAGGCGCTGTTCGCACGCGAGCACAAGCTGGTCGAAAAGTACGGCCTGGAAACCGA TGCGGCCGGCGGCGGCGGTGGCGAGTACGCGCTGCAGGACGGCTTCGGCTGGACCAACGGCGTCACCTTGATGCTGCTGA ACCTGTATCCGGGCAAGGACACCAAAGCCGCACCCGCCAAGCGGGTGCGCAAGCCCGAGGCGGCCGCGCGCTGA
Upstream 100 bases:
>100_bases CCCCGTGCGAAGCCCGTCGGCGTGCCGGCAGCTCGCTCGGTCCCGCCCGCCACACCGGTCGTTTACCATGCCCTACGCCA CTGCCCGTTCTGGAGATGTC
Downstream 100 bases:
>100_bases GGACGGTGCCGCTGCTGCGCAGTGCGTGGCGGCAGCAGGGTCGGATCATCGGCGTTGGATGTCGGGCGGTGCACATCTTC GATGCGCAGCACAGCCGTTG
Product: trehalase
Products: NA
Alternate protein names: Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase
Number of amino acids: Translated: 557; Mature: 556
Protein sequence:
>557_residues MSSAAPPCCTSLLGLSLSMFVAPGTLTAAPLDAPVVNAPAPTPPTPDLAYPELFQAVQRGELFDDQKHFVDFLPLRDPAL INADYLAQHDHPGFDLRKFVDANFEESPPVQTDAIRQDTALREHIDLLWPKLVRSQNHVPPHSSLLALPHPYVVPGGRFR EVYYWDSYFTMLGLVKSGETTLSRQMLDNFAYLIDTYGHIPNGNRTYYLSRSQPPFFSYMVELQAGVEGEAVYQRYLPQL QKEYAYWMQGSDDLQPGQAARHVVRLADGSVLNRYWDERDTPRPEAWLHDTRTAAEVTDRPAAEVYRDLRAGAESGWDYT SRWLADGQNLRTIRTTAILPIDLNSLLYHLERTLALACAQPGAECTRDYAALAQQRKQAIDAHLWNTAGYYADYDWQTRT LSNQVTAAALYPLFAGLASDDHAKRTASTVRKTLLRPGGLATTAVKTGQQWDEPNGWAPLQWVAVDGLRRYGEDALARTI GERFLAQVQALFAREHKLVEKYGLETDAAGGGGGEYALQDGFGWTNGVTLMLLNLYPGKDTKAAPAKRVRKPEAAAR
Sequences:
>Translated_557_residues MSSAAPPCCTSLLGLSLSMFVAPGTLTAAPLDAPVVNAPAPTPPTPDLAYPELFQAVQRGELFDDQKHFVDFLPLRDPAL INADYLAQHDHPGFDLRKFVDANFEESPPVQTDAIRQDTALREHIDLLWPKLVRSQNHVPPHSSLLALPHPYVVPGGRFR EVYYWDSYFTMLGLVKSGETTLSRQMLDNFAYLIDTYGHIPNGNRTYYLSRSQPPFFSYMVELQAGVEGEAVYQRYLPQL QKEYAYWMQGSDDLQPGQAARHVVRLADGSVLNRYWDERDTPRPEAWLHDTRTAAEVTDRPAAEVYRDLRAGAESGWDYT SRWLADGQNLRTIRTTAILPIDLNSLLYHLERTLALACAQPGAECTRDYAALAQQRKQAIDAHLWNTAGYYADYDWQTRT LSNQVTAAALYPLFAGLASDDHAKRTASTVRKTLLRPGGLATTAVKTGQQWDEPNGWAPLQWVAVDGLRRYGEDALARTI GERFLAQVQALFAREHKLVEKYGLETDAAGGGGGEYALQDGFGWTNGVTLMLLNLYPGKDTKAAPAKRVRKPEAAAR >Mature_556_residues SSAAPPCCTSLLGLSLSMFVAPGTLTAAPLDAPVVNAPAPTPPTPDLAYPELFQAVQRGELFDDQKHFVDFLPLRDPALI NADYLAQHDHPGFDLRKFVDANFEESPPVQTDAIRQDTALREHIDLLWPKLVRSQNHVPPHSSLLALPHPYVVPGGRFRE VYYWDSYFTMLGLVKSGETTLSRQMLDNFAYLIDTYGHIPNGNRTYYLSRSQPPFFSYMVELQAGVEGEAVYQRYLPQLQ KEYAYWMQGSDDLQPGQAARHVVRLADGSVLNRYWDERDTPRPEAWLHDTRTAAEVTDRPAAEVYRDLRAGAESGWDYTS RWLADGQNLRTIRTTAILPIDLNSLLYHLERTLALACAQPGAECTRDYAALAQQRKQAIDAHLWNTAGYYADYDWQTRTL SNQVTAAALYPLFAGLASDDHAKRTASTVRKTLLRPGGLATTAVKTGQQWDEPNGWAPLQWVAVDGLRRYGEDALARTIG ERFLAQVQALFAREHKLVEKYGLETDAAGGGGGEYALQDGFGWTNGVTLMLLNLYPGKDTKAAPAKRVRKPEAAAR
Specific function: Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
COG id: COG1626
COG function: function code G; Neutral trehalase
Gene ontology:
Cell location: Periplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 37 family
Homologues:
Organism=Homo sapiens, GI116284412, Length=547, Percent_Identity=34.7349177330896, Blast_Score=252, Evalue=8e-67, Organism=Escherichia coli, GI1787447, Length=552, Percent_Identity=52.536231884058, Blast_Score=562, Evalue=1e-161, Organism=Escherichia coli, GI1789936, Length=519, Percent_Identity=51.252408477842, Blast_Score=495, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17542196, Length=537, Percent_Identity=31.6573556797021, Blast_Score=244, Evalue=6e-65, Organism=Caenorhabditis elegans, GI25148109, Length=534, Percent_Identity=31.2734082397004, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI25141398, Length=545, Percent_Identity=31.1926605504587, Blast_Score=234, Evalue=9e-62, Organism=Caenorhabditis elegans, GI17565078, Length=510, Percent_Identity=31.1764705882353, Blast_Score=231, Evalue=9e-61, Organism=Caenorhabditis elegans, GI71987755, Length=424, Percent_Identity=27.8301886792453, Blast_Score=169, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6319473, Length=451, Percent_Identity=29.7117516629712, Blast_Score=153, Evalue=9e-38, Organism=Saccharomyces cerevisiae, GI6320204, Length=452, Percent_Identity=28.0973451327434, Blast_Score=147, Evalue=4e-36, Organism=Drosophila melanogaster, GI24656680, Length=587, Percent_Identity=31.175468483816, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24656675, Length=587, Percent_Identity=31.175468483816, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24656661, Length=524, Percent_Identity=31.6793893129771, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI17933716, Length=524, Percent_Identity=31.6793893129771, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24656670, Length=524, Percent_Identity=31.6793893129771, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24656685, Length=474, Percent_Identity=32.2784810126582, Blast_Score=221, Evalue=8e-58, Organism=Drosophila melanogaster, GI22024178, Length=539, Percent_Identity=29.3135435992579, Blast_Score=204, Evalue=9e-53, Organism=Drosophila melanogaster, GI45551104, Length=381, Percent_Identity=30.1837270341207, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI28573474, Length=313, Percent_Identity=28.4345047923323, Blast_Score=121, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TREA_XANAC (Q8PPT1)
Other databases:
- EMBL: AE008923 - RefSeq: NP_640957.2 - ProteinModelPortal: Q8PPT1 - SMR: Q8PPT1 - GeneID: 1154675 - GenomeReviews: AE008923_GR - KEGG: xac:XAC0604 - NMPDR: fig|190486.1.peg.601 - HOGENOM: HBG485982 - OMA: NRYWDAS - ProtClustDB: PRK13272 - BioCyc: XAXO190486:XAC0604-MONOMER - BRENDA: 3.2.1.28 - HAMAP: MF_01060 - InterPro: IPR008928 - InterPro: IPR001661 - InterPro: IPR018232 - PANTHER: PTHR23403 - PRINTS: PR00744
Pfam domain/function: PF01204 Trehalase; SSF48208 Glyco_trans_6hp
EC number: =3.2.1.28
Molecular weight: Translated: 62112; Mature: 61981
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00927 TREHALASE_1; PS00928 TREHALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAAPPCCTSLLGLSLSMFVAPGTLTAAPLDAPVVNAPAPTPPTPDLAYPELFQAVQRG CCCCCCHHHHHHHHHHHHHEECCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC ELFDDQKHFVDFLPLRDPALINADYLAQHDHPGFDLRKFVDANFEESPPVQTDAIRQDTA CCCCCHHHHHHHCCCCCCCEECHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHH LREHIDLLWPKLVRSQNHVPPHSSLLALPHPYVVPGGRFREVYYWDSYFTMLGLVKSGET HHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEECCCCCEEEEEEEHHHHHHHHHHHCCCH TLSRQMLDNFAYLIDTYGHIPNGNRTYYLSRSQPPFFSYMVELQAGVEGEAVYQRYLPQL HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH QKEYAYWMQGSDDLQPGQAARHVVRLADGSVLNRYWDERDTPRPEAWLHDTRTAAEVTDR HHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHCCHHHHHHCCC PAAEVYRDLRAGAESGWDYTSRWLADGQNLRTIRTTAILPIDLNSLLYHLERTLALACAQ CHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHCC PGAECTRDYAALAQQRKQAIDAHLWNTAGYYADYDWQTRTLSNQVTAAALYPLFAGLASD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCC DHAKRTASTVRKTLLRPGGLATTAVKTGQQWDEPNGWAPLQWVAVDGLRRYGEDALARTI HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GERFLAQVQALFAREHKLVEKYGLETDAAGGGGGEYALQDGFGWTNGVTLMLLNLYPGKD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCC TKAAPAKRVRKPEAAAR CCCCCHHHHCCCHHCCC >Mature Secondary Structure SSAAPPCCTSLLGLSLSMFVAPGTLTAAPLDAPVVNAPAPTPPTPDLAYPELFQAVQRG CCCCCHHHHHHHHHHHHHEECCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC ELFDDQKHFVDFLPLRDPALINADYLAQHDHPGFDLRKFVDANFEESPPVQTDAIRQDTA CCCCCHHHHHHHCCCCCCCEECHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHH LREHIDLLWPKLVRSQNHVPPHSSLLALPHPYVVPGGRFREVYYWDSYFTMLGLVKSGET HHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEECCCCCEEEEEEEHHHHHHHHHHHCCCH TLSRQMLDNFAYLIDTYGHIPNGNRTYYLSRSQPPFFSYMVELQAGVEGEAVYQRYLPQL HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH QKEYAYWMQGSDDLQPGQAARHVVRLADGSVLNRYWDERDTPRPEAWLHDTRTAAEVTDR HHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHCCHHHHHHCCC PAAEVYRDLRAGAESGWDYTSRWLADGQNLRTIRTTAILPIDLNSLLYHLERTLALACAQ CHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHCC PGAECTRDYAALAQQRKQAIDAHLWNTAGYYADYDWQTRTLSNQVTAAALYPLFAGLASD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCC DHAKRTASTVRKTLLRPGGLATTAVKTGQQWDEPNGWAPLQWVAVDGLRRYGEDALARTI HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GERFLAQVQALFAREHKLVEKYGLETDAAGGGGGEYALQDGFGWTNGVTLMLLNLYPGKD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCC TKAAPAKRVRKPEAAAR CCCCCHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217