| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241374
Identifier: 21241374
GI number: 21241374
Start: 707611
End: 708336
Strand: Reverse
Name: 21241374
Synonym: XAC0603
Alternate gene names: NA
Gene position: 708336-707611 (Counterclockwise)
Preceding gene: 77748541
Following gene: 77748540
Centisome position: 13.69
GC content: 63.22
Gene sequence:
>726_bases ATGCGCACTCTTTCACTCCAGGACGGACCCATGGCCGTACGCACGCTCAACGAATTTCTCGCCCATTCCAGGGAAAAGGA CGTCAGCCCCGATCCGTTCGAACTGGAAAACCCGCATCTGCTGGAAGTGCGCCTCAACGGCATGGTGTGGTCCAAGGCCG GCGCCATGGTGGCGCGCACCGGAAACGTCAAGTTCACCCGCGAGGGACTGCTGGAACAGGGCCTGGGCAATCTGCTGAAA AAAGCCGTCAGCGGCGAAGGCATGCAGTTGATGAAGGCCGAAGGCCAGGGCCGCGTGTATCTGGCCGACCTCGGCAAACT GGTGACGCTGCTGCGCTTGAATGGCGAGTCGATCTTCGTCAATGGCAACGATGTGCTGGCGTTCGAATCGGGCGTCGAAC ACAAGATCACCATGATGCGCAAAGTGGCCGGCATGCTCTCGGGCGGGCTGTTCAACGTGCGCCTGAGCGGCCACGGCATC GTGGCGATCACCTCGCACTACGAGCCGCTGACCTTGCCGGTCACCGCCACCAGCGGCCCGGTGTTCACCGACCCCAACGC TACCGTCGCCTGGTCCGGCACGCTGACACCGGAACTGGTCACCGACGTCTCGATCGGCACGCTGTTCGGCCGCGGCTCGG GCGAAAGCCTGCAGATGCGTTTCAGCGGCGAAGGCTGGGTCGTGGTGCAGCCCTATGAAGAAGCCAGCTTCCAGGCCAAG GGCTGA
Upstream 100 bases:
>100_bases GTCGGTGATCGCCACCTTGGCGCTGGCATCGCATGCGCTGATGCGCAGCACATGGGCTCCCGGTGCCGGCCTGCGACTGC ACCGCAGACGGCCGCGTATC
Downstream 100 bases:
>100_bases TCCGGGCCGCCGGCAGCAGTCAACAATGCGCATCGCCCGGTTGCACGCCACGCAGCCGGGCAGTTTTCCGGCCAACCCTG TAGGAGCGCCCCTGGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MRTLSLQDGPMAVRTLNEFLAHSREKDVSPDPFELENPHLLEVRLNGMVWSKAGAMVARTGNVKFTREGLLEQGLGNLLK KAVSGEGMQLMKAEGQGRVYLADLGKLVTLLRLNGESIFVNGNDVLAFESGVEHKITMMRKVAGMLSGGLFNVRLSGHGI VAITSHYEPLTLPVTATSGPVFTDPNATVAWSGTLTPELVTDVSIGTLFGRGSGESLQMRFSGEGWVVVQPYEEASFQAK G
Sequences:
>Translated_241_residues MRTLSLQDGPMAVRTLNEFLAHSREKDVSPDPFELENPHLLEVRLNGMVWSKAGAMVARTGNVKFTREGLLEQGLGNLLK KAVSGEGMQLMKAEGQGRVYLADLGKLVTLLRLNGESIFVNGNDVLAFESGVEHKITMMRKVAGMLSGGLFNVRLSGHGI VAITSHYEPLTLPVTATSGPVFTDPNATVAWSGTLTPELVTDVSIGTLFGRGSGESLQMRFSGEGWVVVQPYEEASFQAK G >Mature_241_residues MRTLSLQDGPMAVRTLNEFLAHSREKDVSPDPFELENPHLLEVRLNGMVWSKAGAMVARTGNVKFTREGLLEQGLGNLLK KAVSGEGMQLMKAEGQGRVYLADLGKLVTLLRLNGESIFVNGNDVLAFESGVEHKITMMRKVAGMLSGGLFNVRLSGHGI VAITSHYEPLTLPVTATSGPVFTDPNATVAWSGTLTPELVTDVSIGTLFGRGSGESLQMRFSGEGWVVVQPYEEASFQAK G
Specific function: Unknown
COG id: COG2013
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25961; Mature: 25961
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLSLQDGPMAVRTLNEFLAHSREKDVSPDPFELENPHLLEVRLNGMVWSKAGAMVART CCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCEEEEEC GNVKFTREGLLEQGLGNLLKKAVSGEGMQLMKAEGQGRVYLADLGKLVTLLRLNGESIFV CCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHEEEEEEECCCEEEE NGNDVLAFESGVEHKITMMRKVAGMLSGGLFNVRLSGHGIVAITSHYEPLTLPVTATSGP ECCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCC VFTDPNATVAWSGTLTPELVTDVSIGTLFGRGSGESLQMRFSGEGWVVVQPYEEASFQAK EEECCCCEEEECCCCCHHHHHCEEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCC G C >Mature Secondary Structure MRTLSLQDGPMAVRTLNEFLAHSREKDVSPDPFELENPHLLEVRLNGMVWSKAGAMVART CCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCEEEEEC GNVKFTREGLLEQGLGNLLKKAVSGEGMQLMKAEGQGRVYLADLGKLVTLLRLNGESIFV CCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHEEEEEEECCCEEEE NGNDVLAFESGVEHKITMMRKVAGMLSGGLFNVRLSGHGIVAITSHYEPLTLPVTATSGP ECCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCC VFTDPNATVAWSGTLTPELVTDVSIGTLFGRGSGESLQMRFSGEGWVVVQPYEEASFQAK EEECCCCEEEECCCCCHHHHHCEEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA