| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yecE [C]
Identifier: 21241376
GI number: 21241376
Start: 710677
End: 711447
Strand: Reverse
Name: yecE [C]
Synonym: XAC0605
Alternate gene names: 21241376
Gene position: 711447-710677 (Counterclockwise)
Preceding gene: 21241379
Following gene: 77748541
Centisome position: 13.75
GC content: 69.78
Gene sequence:
>771_bases ATGCCAGCTCGTCCATCCGGTGCCATTGCACGTGTGCGTTGTGGTTGCGCAGGCTGGTCGATTCCCGCCGCAGACCGCGC ACAGTTCGACGAGGGCGCCAGCGTATTGCAGCGCTACGCCACGCGTTTGGACGCGGTGGAAATCAACTCCTCGTTCTATC GTCCGCACCGCGCCAGCACCTACGCGCGATGGGCCGACAGCGTGCCGGAGGACTTTCGTTTTTCGGTCAAGCTGCCACGC AGCATCAGCCACGACGCACGCCTGCACGGCACCGGGCCGCTGCTGGATGCCTTCCTGGCGCAGGCCGGCGCGCTGGGAAC ACGACTGGGCTGCCTGCTGCTGCAACTGCCGCCCAGCGCGGCCTTCGATGCCGCGGTGGCCGCGCGGTTTTTCGCGATGC TGCGCCGGCGCTGGGACGGCGGCGTGGTCTGCGAACCGCGCCACGCCAGCTGGTTTGCCGCACCTGCGCAGGCGCTGCTG GCGCGCCATCGGATTGCACGCTGCGCCGCCGACCCGGCGCCGGTGCCCGCGGCCTCACTGCCGAGCCCGGCTGCTGCACC GCTGTATTGGCGCTGGCATGGCGCCCCGCGTCGCTACTACAGCAGCTACGCGCACACCGCACTGCAGGCGCTGGCCGCCA CGGTGCGCGCCAGCCACCCAGGCAGCACGCAGCCTCCGGCCGAACGCTGGGTGATCTTCGACAACACCGCAGCCGGGTGC GCAACCTCCAATGCGCTGGAATTGCAGCGCTTGCTGAGGAACGAACGCTAG
Upstream 100 bases:
>100_bases CCAGTATCGAAGCGCTGCGTGATTCGCCCGTGATCGCGATGCACACGGCATCCTGACGCACATGCATGCATAGAGTGCTG CCGCCCCCAGCTTACCCGCC
Downstream 100 bases:
>100_bases CGCAAGCGCGGGCACGCGGCGGCCTCCCGGCACGCCAGTGGCGCGCATCTTGCAGCAGCCAGGCTGCAGGCATATCGGCG CGCCACCATTCAAGCTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MPARPSGAIARVRCGCAGWSIPAADRAQFDEGASVLQRYATRLDAVEINSSFYRPHRASTYARWADSVPEDFRFSVKLPR SISHDARLHGTGPLLDAFLAQAGALGTRLGCLLLQLPPSAAFDAAVAARFFAMLRRRWDGGVVCEPRHASWFAAPAQALL ARHRIARCAADPAPVPAASLPSPAAAPLYWRWHGAPRRYYSSYAHTALQALAATVRASHPGSTQPPAERWVIFDNTAAGC ATSNALELQRLLRNER
Sequences:
>Translated_256_residues MPARPSGAIARVRCGCAGWSIPAADRAQFDEGASVLQRYATRLDAVEINSSFYRPHRASTYARWADSVPEDFRFSVKLPR SISHDARLHGTGPLLDAFLAQAGALGTRLGCLLLQLPPSAAFDAAVAARFFAMLRRRWDGGVVCEPRHASWFAAPAQALL ARHRIARCAADPAPVPAASLPSPAAAPLYWRWHGAPRRYYSSYAHTALQALAATVRASHPGSTQPPAERWVIFDNTAAGC ATSNALELQRLLRNER >Mature_255_residues PARPSGAIARVRCGCAGWSIPAADRAQFDEGASVLQRYATRLDAVEINSSFYRPHRASTYARWADSVPEDFRFSVKLPRS ISHDARLHGTGPLLDAFLAQAGALGTRLGCLLLQLPPSAAFDAAVAARFFAMLRRRWDGGVVCEPRHASWFAAPAQALLA RHRIARCAADPAPVPAASLPSPAAAPLYWRWHGAPRRYYSSYAHTALQALAATVRASHPGSTQPPAERWVIFDNTAAGCA TSNALELQRLLRNER
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788175, Length=175, Percent_Identity=32, Blast_Score=67, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27807; Mature: 27676
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARPSGAIARVRCGCAGWSIPAADRAQFDEGASVLQRYATRLDAVEINSSFYRPHRAST CCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCHHCCCCCHHH YARWADSVPEDFRFSVKLPRSISHDARLHGTGPLLDAFLAQAGALGTRLGCLLLQLPPSA HHHHHHCCCCCCEEEEECCCCCCCCCEECCCCHHHHHHHHHHCCHHHHHHEEEEECCCCH AFDAAVAARFFAMLRRRWDGGVVCEPRHASWFAAPAQALLARHRIARCAADPAPVPAASL HHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PSPAAAPLYWRWHGAPRRYYSSYAHTALQALAATVRASHPGSTQPPAERWVIFDNTAAGC CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC ATSNALELQRLLRNER CCCHHHHHHHHHHCCC >Mature Secondary Structure PARPSGAIARVRCGCAGWSIPAADRAQFDEGASVLQRYATRLDAVEINSSFYRPHRAST CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCHHCCCCCHHH YARWADSVPEDFRFSVKLPRSISHDARLHGTGPLLDAFLAQAGALGTRLGCLLLQLPPSA HHHHHHCCCCCCEEEEECCCCCCCCCEECCCCHHHHHHHHHHCCHHHHHHEEEEECCCCH AFDAAVAARFFAMLRRRWDGGVVCEPRHASWFAAPAQALLARHRIARCAADPAPVPAASL HHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PSPAAAPLYWRWHGAPRRYYSSYAHTALQALAATVRASHPGSTQPPAERWVIFDNTAAGC CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC ATSNALELQRLLRNER CCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA