Click here to switch to the map view.

The map label for this gene is cirA [C]

Identifier: 77748503

GI number: 77748503

Start: 87833

End: 90397

Strand: Reverse

Name: cirA [C]

Synonym: XAC0074

Alternate gene names: 77748503

Gene position: 90397-87833 (Counterclockwise)

Preceding gene: 77748504

Following gene: 21240847

Centisome position: 1.75

GC content: 67.91

Gene sequence:

>2565_bases
TTGATCGCTTGGCTTCCCTGGCAATCCACCGCTGCCGACATGTCCGGCGGAGCCGACGCGCTGACCATGGATGCGGTGCA
GGTGCGCAACCCGTTCCAGTCGCAGAACACGCGCGCCATCGCCACCAAGCAGGCGGCGCCCACCATCGTGGATTCGGTCG
CCGCCGACAGCATCGGGCAATTGCCGGACTTCAATGTGGGCGATGCGCTGCGCCGGGTCACCGGCGTGAGCACGGTGGAG
TACCAGGGCGAACCGCGCTATGTGACGGTGCGCGGCCTCAACGGCAACTACAACAGCATGCTGATCGACGGCTTTGCCTT
CGCCAGCAACGACATCGGCAGCCGCCAGGCGCTGATGGATGTGCTGCCGGCGAACTTCGTGGACCGCATCGATGTGGTGA
AGTCGCTGCTGCCGGAAAACGACGGCGGCGCGATCGGGGGCGTGACCGACCTGGTCACCGCCACCGGCTTTGCCCGGCCC
GATGGGCTGCTGACCGCCTCGGCCAAGGGCGGCGCCAACCTCATGGGGAGCCGTTATGGCGGCCGCACGCCGGTGGGCGA
AGGCGAGCTGAAATGGGGCAAGCGCTTCGGGCGTGACGGCCAGTTCGCGTTTCTGGGTGCGGCCAGCATCTGGCGCCGTG
AGATTTCGGTGCCGCAGCAGGAAAATGGCGGCGCCCTGAACTGGTACAACGCCGATGGCACGCGCGCGCCGTCGGCCTAT
GGCGGCACCGGCGCTGCGGTGCCCAGCGAACGGCGCTGGTACAACTACGACAACACCCGCGAACGGCGCGGCGTGACCGC
ACGCGTGGATTGGCAGCCGGACGGTCCGCTCAGCGGCCATGTGTCCGGCTACACGTTCAACCAGCACGAAGCCTCCGACC
GCAATGCCCAGGTCGCCCAGGTGCAGAACAGCGCGCGCCTGACCCGCAGCGGCGCGCAAAGCGGCACGCTGGACAATCTC
AACCAGCTCGTCGAGCTGGGGCAGCTGCGCTGGAAGCGGGGGCTGTCCGGCATCAATGGCGAACTGCTGGCCGAGCTGCC
TGGCCAGTGGCGCGGCGCGCTGCGGGCAAGCACCTCGCGCGCCACGGTGGACAACCCGCAGACCTGGGACCGCTTCCAGC
AGAACCGCCTGGCTTACGGCTTCGATTGGAACGGCACCCTGCCGGCATTCACGGCCCTGGACCCGGCCCTGGCGGACGAC
CCGACCCGCTACGCCAACCTCAACCACCAGCAGGAGCGCACCACCTACGCCGAACGGGTGAGCGACCTGCAACTGGAGCT
ACGTCGCAACATGGACGAAGACAGCCGGGGGCTGGGACTGGCTTTTGGCCTGCGACAGGTGCGCACGCACATGCAGACCG
CGTTCCAGCGCACGACCTGGAGCGGGTTGCCTTATTCGCTGGCCGATGTGCTGGGCGATCCCACCTGCGCCCTGGGTTGC
AACGCGCCCATGTGGACCATCGACCCGGACCTGGCCGACGCCCGCTGGGATGCGGCGTCCGGCCAGGCGCGCGGCGTGGC
GGACATCACCGCGCAGAACAGCGGTACCTACACCGTGGATGAGCAGGTGCGCGCCGGCTTCGCACAAGCACAGTGGCGCG
GCGAGCGCTGGCGCTTGGCCGGCGGCGTGCGCCTGGAGCAGACCCGCTTTGGCAGCAGCGGCCAGCAATTGAGCGGCACC
GTCTGGGCGCCTGTCAGTGCGCAACGCACCTACCGCAACTGGTTGCCATCGCTGGCCGGCCAGGTGCAGACCAGTGCCAA
CGGCACGTTACGCTTCGGCGCCTCGCGCTCGATCGGGCGACCGCGCCTGGACCAGATGGCCTTGAACGGCGGCGTGCTCG
CGCTGGGCAGCAACCCGCCCACGCTCAACCAGGGCAACCCGGACCTGCAGCCGCGTCGCTCGCAGAATCTGGACCTTGGC
CACGACTGGACGTTCGACGACGGCGGCAGCCTGCTGTCGATCGCGCTGTTCCACAAGACCATCGACAACGAGATTTTCCG
TTACGGCCAGCTGCAGAACATCGACGGCGAGCAGGTGCTGGTCACCCAACCGCGCAATACCGACCGGCCGGTCCGCATGC
GCGGCGCCGAACTCGGCGCGATCAAGGAACTGGGCCCATGGCTGCCCGCGCTGGCCGGGCTGTCGGTCGGCGCCAATGTC
ACCTTCCTGGACGTGGACTACCCGGTGGTGCTCGGCGATGGCAGCCGCACCACCTTGTCGGTGCTGCCGCAGCAGCCCAA
GCAGCTGTGGAATCTGACCCTCAATTACGCCCGTGGGCCGCTGCGCGGCACCCTGGCCTGGAGCCGGACCGGCGAGCTGT
GGGACGACCGCTACCCCAACTACAGCAACCAGCAGGAGTTTTATCGCAACCGCTACCAACAGCCGCTGGACCGTCTCGAC
CTGAAACTGGCCTGGGACGTCTCGCCGGCAGTGGCAGTGAGCCTGGATGTGCTCAACCTGACCGGCCAGGGTTACGAATA
CCGCATCGGCCGCCACCAGGAATACGTGCAATCGGCCTGGAAAATGGCACCCACCGTGATGCTCGGCGTCAACGTCAAAC
TCTGA

Upstream 100 bases:

>100_bases
TCGTGCCATGCGCCTGTTGCATCCCCCTTCCCGACCCCATTGCGCTGCCGTGTCTCGCCCGCCGCATCCGCATGCGCTAT
CGCTGGCGCTGGGGCTGGCC

Downstream 100 bases:

>100_bases
GGGTTTTCCCATGTCGTCGTTTCTGGACACACGCATCAGCCGCCGTCACCTGATGGCTGCCACCGGCGCCTCGCTGCTGA
CCACCGGTCTGCCCACACGG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Subfamily; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; NB-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Plug; NB-Dependent Receptor Subfamily Protein; NB Dependent Receptor Protein; Outer Membrane Insertion C-Terminal Signal; Crossover Junction Endodeoxyribonuclease RuvC; NB-Dependent Outer Membrane Ferripyoverdine Receptor; NB Dependent Receptor; NB-Dependent Outer Membrane Fe Receptor Protein; Exported nB-Dependent Receptor; Outer Membrane Receptor Family Protein; Argininosuccinate Synthase; 3-Dehydroquinate Synthase; NB Dependent Receptor For Iron Chelates; Ferrienterochelin/Colicin Outer Membrane Receptor; NB-Dependent Receptor Domain Protein; Outer Membrane Receptor Protein

Number of amino acids: Translated: 854; Mature: 854

Protein sequence:

>854_residues
MIAWLPWQSTAADMSGGADALTMDAVQVRNPFQSQNTRAIATKQAAPTIVDSVAADSIGQLPDFNVGDALRRVTGVSTVE
YQGEPRYVTVRGLNGNYNSMLIDGFAFASNDIGSRQALMDVLPANFVDRIDVVKSLLPENDGGAIGGVTDLVTATGFARP
DGLLTASAKGGANLMGSRYGGRTPVGEGELKWGKRFGRDGQFAFLGAASIWRREISVPQQENGGALNWYNADGTRAPSAY
GGTGAAVPSERRWYNYDNTRERRGVTARVDWQPDGPLSGHVSGYTFNQHEASDRNAQVAQVQNSARLTRSGAQSGTLDNL
NQLVELGQLRWKRGLSGINGELLAELPGQWRGALRASTSRATVDNPQTWDRFQQNRLAYGFDWNGTLPAFTALDPALADD
PTRYANLNHQQERTTYAERVSDLQLELRRNMDEDSRGLGLAFGLRQVRTHMQTAFQRTTWSGLPYSLADVLGDPTCALGC
NAPMWTIDPDLADARWDAASGQARGVADITAQNSGTYTVDEQVRAGFAQAQWRGERWRLAGGVRLEQTRFGSSGQQLSGT
VWAPVSAQRTYRNWLPSLAGQVQTSANGTLRFGASRSIGRPRLDQMALNGGVLALGSNPPTLNQGNPDLQPRRSQNLDLG
HDWTFDDGGSLLSIALFHKTIDNEIFRYGQLQNIDGEQVLVTQPRNTDRPVRMRGAELGAIKELGPWLPALAGLSVGANV
TFLDVDYPVVLGDGSRTTLSVLPQQPKQLWNLTLNYARGPLRGTLAWSRTGELWDDRYPNYSNQQEFYRNRYQQPLDRLD
LKLAWDVSPAVAVSLDVLNLTGQGYEYRIGRHQEYVQSAWKMAPTVMLGVNVKL

Sequences:

>Translated_854_residues
MIAWLPWQSTAADMSGGADALTMDAVQVRNPFQSQNTRAIATKQAAPTIVDSVAADSIGQLPDFNVGDALRRVTGVSTVE
YQGEPRYVTVRGLNGNYNSMLIDGFAFASNDIGSRQALMDVLPANFVDRIDVVKSLLPENDGGAIGGVTDLVTATGFARP
DGLLTASAKGGANLMGSRYGGRTPVGEGELKWGKRFGRDGQFAFLGAASIWRREISVPQQENGGALNWYNADGTRAPSAY
GGTGAAVPSERRWYNYDNTRERRGVTARVDWQPDGPLSGHVSGYTFNQHEASDRNAQVAQVQNSARLTRSGAQSGTLDNL
NQLVELGQLRWKRGLSGINGELLAELPGQWRGALRASTSRATVDNPQTWDRFQQNRLAYGFDWNGTLPAFTALDPALADD
PTRYANLNHQQERTTYAERVSDLQLELRRNMDEDSRGLGLAFGLRQVRTHMQTAFQRTTWSGLPYSLADVLGDPTCALGC
NAPMWTIDPDLADARWDAASGQARGVADITAQNSGTYTVDEQVRAGFAQAQWRGERWRLAGGVRLEQTRFGSSGQQLSGT
VWAPVSAQRTYRNWLPSLAGQVQTSANGTLRFGASRSIGRPRLDQMALNGGVLALGSNPPTLNQGNPDLQPRRSQNLDLG
HDWTFDDGGSLLSIALFHKTIDNEIFRYGQLQNIDGEQVLVTQPRNTDRPVRMRGAELGAIKELGPWLPALAGLSVGANV
TFLDVDYPVVLGDGSRTTLSVLPQQPKQLWNLTLNYARGPLRGTLAWSRTGELWDDRYPNYSNQQEFYRNRYQQPLDRLD
LKLAWDVSPAVAVSLDVLNLTGQGYEYRIGRHQEYVQSAWKMAPTVMLGVNVKL
>Mature_854_residues
MIAWLPWQSTAADMSGGADALTMDAVQVRNPFQSQNTRAIATKQAAPTIVDSVAADSIGQLPDFNVGDALRRVTGVSTVE
YQGEPRYVTVRGLNGNYNSMLIDGFAFASNDIGSRQALMDVLPANFVDRIDVVKSLLPENDGGAIGGVTDLVTATGFARP
DGLLTASAKGGANLMGSRYGGRTPVGEGELKWGKRFGRDGQFAFLGAASIWRREISVPQQENGGALNWYNADGTRAPSAY
GGTGAAVPSERRWYNYDNTRERRGVTARVDWQPDGPLSGHVSGYTFNQHEASDRNAQVAQVQNSARLTRSGAQSGTLDNL
NQLVELGQLRWKRGLSGINGELLAELPGQWRGALRASTSRATVDNPQTWDRFQQNRLAYGFDWNGTLPAFTALDPALADD
PTRYANLNHQQERTTYAERVSDLQLELRRNMDEDSRGLGLAFGLRQVRTHMQTAFQRTTWSGLPYSLADVLGDPTCALGC
NAPMWTIDPDLADARWDAASGQARGVADITAQNSGTYTVDEQVRAGFAQAQWRGERWRLAGGVRLEQTRFGSSGQQLSGT
VWAPVSAQRTYRNWLPSLAGQVQTSANGTLRFGASRSIGRPRLDQMALNGGVLALGSNPPTLNQGNPDLQPRRSQNLDLG
HDWTFDDGGSLLSIALFHKTIDNEIFRYGQLQNIDGEQVLVTQPRNTDRPVRMRGAELGAIKELGPWLPALAGLSVGANV
TFLDVDYPVVLGDGSRTTLSVLPQQPKQLWNLTLNYARGPLRGTLAWSRTGELWDDRYPNYSNQQEFYRNRYQQPLDRLD
LKLAWDVSPAVAVSLDVLNLTGQGYEYRIGRHQEYVQSAWKMAPTVMLGVNVKL

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93595; Mature: 93595

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAWLPWQSTAADMSGGADALTMDAVQVRNPFQSQNTRAIATKQAAPTIVDSVAADSIGQ
CEEECCCCCCHHHCCCCCCEEEEHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCC
LPDFNVGDALRRVTGVSTVEYQGEPRYVTVRGLNGNYNSMLIDGFAFASNDIGSRQALMD
CCCCCHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHH
VLPANFVDRIDVVKSLLPENDGGAIGGVTDLVTATGFARPDGLLTASAKGGANLMGSRYG
HHCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCC
GRTPVGEGELKWGKRFGRDGQFAFLGAASIWRREISVPQQENGGALNWYNADGTRAPSAY
CCCCCCCCCCHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCC
GGTGAAVPSERRWYNYDNTRERRGVTARVDWQPDGPLSGHVSGYTFNQHEASDRNAQVAQ
CCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCHHHH
VQNSARLTRSGAQSGTLDNLNQLVELGQLRWKRGLSGINGELLAELPGQWRGALRASTSR
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHCCCCC
ATVDNPQTWDRFQQNRLAYGFDWNGTLPAFTALDPALADDPTRYANLNHQQERTTYAERV
CCCCCCHHHHHHHHCCEEEEECCCCCCCHHHHCCCHHCCCCHHHCCCCCHHHHHHHHHHH
SDLQLELRRNMDEDSRGLGLAFGLRQVRTHMQTAFQRTTWSGLPYSLADVLGDPTCALGC
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEECC
NAPMWTIDPDLADARWDAASGQARGVADITAQNSGTYTVDEQVRAGFAQAQWRGERWRLA
CCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECHHHHCCHHHHHHCCCEEEEE
GGVRLEQTRFGSSGQQLSGTVWAPVSAQRTYRNWLPSLAGQVQTSANGTLRFGASRSIGR
CCEEEECCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCEECCCCCEEEECCCCCCCC
PRLDQMALNGGVLALGSNPPTLNQGNPDLQPRRSQNLDLGHDWTFDDGGSLLSIALFHKT
CCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHH
IDNEIFRYGQLQNIDGEQVLVTQPRNTDRPVRMRGAELGAIKELGPWLPALAGLSVGANV
HHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCE
TFLDVDYPVVLGDGSRTTLSVLPQQPKQLWNLTLNYARGPLRGTLAWSRTGELWDDRYPN
EEEECCCEEEECCCCCCEEEECCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCHHCCCCC
YSNQQEFYRNRYQQPLDRLDLKLAWDVSPAVAVSLDVLNLTGQGYEYRIGRHQEYVQSAW
CCCHHHHHHHHHHCCHHHCCEEEEECCCCCEEEEEEEEEECCCCEEEECCCHHHHHHHHH
KMAPTVMLGVNVKL
HHCCEEEEEEEEEC
>Mature Secondary Structure
MIAWLPWQSTAADMSGGADALTMDAVQVRNPFQSQNTRAIATKQAAPTIVDSVAADSIGQ
CEEECCCCCCHHHCCCCCCEEEEHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCC
LPDFNVGDALRRVTGVSTVEYQGEPRYVTVRGLNGNYNSMLIDGFAFASNDIGSRQALMD
CCCCCHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHH
VLPANFVDRIDVVKSLLPENDGGAIGGVTDLVTATGFARPDGLLTASAKGGANLMGSRYG
HHCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCC
GRTPVGEGELKWGKRFGRDGQFAFLGAASIWRREISVPQQENGGALNWYNADGTRAPSAY
CCCCCCCCCCHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCC
GGTGAAVPSERRWYNYDNTRERRGVTARVDWQPDGPLSGHVSGYTFNQHEASDRNAQVAQ
CCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCHHHH
VQNSARLTRSGAQSGTLDNLNQLVELGQLRWKRGLSGINGELLAELPGQWRGALRASTSR
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHCCCCC
ATVDNPQTWDRFQQNRLAYGFDWNGTLPAFTALDPALADDPTRYANLNHQQERTTYAERV
CCCCCCHHHHHHHHCCEEEEECCCCCCCHHHHCCCHHCCCCHHHCCCCCHHHHHHHHHHH
SDLQLELRRNMDEDSRGLGLAFGLRQVRTHMQTAFQRTTWSGLPYSLADVLGDPTCALGC
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEECC
NAPMWTIDPDLADARWDAASGQARGVADITAQNSGTYTVDEQVRAGFAQAQWRGERWRLA
CCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECHHHHCCHHHHHHCCCEEEEE
GGVRLEQTRFGSSGQQLSGTVWAPVSAQRTYRNWLPSLAGQVQTSANGTLRFGASRSIGR
CCEEEECCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCEECCCCCEEEECCCCCCCC
PRLDQMALNGGVLALGSNPPTLNQGNPDLQPRRSQNLDLGHDWTFDDGGSLLSIALFHKT
CCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHH
IDNEIFRYGQLQNIDGEQVLVTQPRNTDRPVRMRGAELGAIKELGPWLPALAGLSVGANV
HHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCE
TFLDVDYPVVLGDGSRTTLSVLPQQPKQLWNLTLNYARGPLRGTLAWSRTGELWDDRYPN
EEEECCCEEEECCCCCCEEEECCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCHHCCCCC
YSNQQEFYRNRYQQPLDRLDLKLAWDVSPAVAVSLDVLNLTGQGYEYRIGRHQEYVQSAW
CCCHHHHHHHHHHCCHHHCCEEEEECCCCCEEEEEEEEEECCCCEEEECCCHHHHHHHHH
KMAPTVMLGVNVKL
HHCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA