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The map label for this gene is yprB [H]

Identifier: 77748504

GI number: 77748504

Start: 94574

End: 96061

Strand: Reverse

Name: yprB [H]

Synonym: XAC0077

Alternate gene names: 77748504

Gene position: 96061-94574 (Counterclockwise)

Preceding gene: 21240852

Following gene: 77748503

Centisome position: 1.86

GC content: 68.95

Gene sequence:

>1488_bases
ATGAGTGTGAGCGCGGACCGGCTGCGCTTGCTGCGGCGTCAGGCCGGGCAGGCGGATGTGCCTGCGCCGGCGAAGGCTGA
CGATGGCGATGCGCTGCACGATGCGGCGGCGGTGGATGCGAAGGCCGTGGATGCTGCGCCTGTCGGTGAGGTTGCGCCGC
CGGCTGCCGGCGCGGACACGCAGGGCAGGTCGCCTGCGCCTGGTCATGCCCCAGGCGTCAGCGCCGAACGTCTGCGCCTG
CTGCGCCGTCAGGTTGGCGGGCTGACGCCTGCCGCGCGCAAGGCCGATGCGGTCATGCCGACACGCGCACAGCGGGCAGC
GGTCCCCAGCGCCGCGTTACCTACTGCGCGCCCGCCGCTGCGAGATAACGCGGCTGCACGTCATGGCGCCGTGGCCGGTC
GCCCGAACGAGGCACGCGCCGCATCAACACGCACGCCCCGCGCCTTGCAGTCGTCCATACCTGCACCGCCTGCGCGCGAC
GCATCGGTATTTGCGTGGGTGGAGCACGATGTGCGCCACAAGCCGGCGCTGCCGTCGACTGTAGATGTAGATGTAGATGT
AGATGTAGATGTAGATGTAGATGCAATCATCGCTGTGGATGCGGATGGCGCAAGCCATTGGCCGACAGCGCGCGGCACAA
CGACGGCATCGCCCGCATCGATGTCGCCGGCACATCCGGCACAACGCCGCACCGACATCGCCGGCTTGCGCAAGATGATC
GGCCTGCGCGAGCGCGCGGTCTCGGCGCACGCACCGGTCCGCGCGCCATCCACCGACCGATCTCTGCCCGGCAACGAGAT
CGCGCCCGGCCTGCACCTGATCCAGGCGTTCCTGCCGCAGGCGATTCCCACCGAGGCGCTCTCGCTGGCCTTCGCCAAAC
GCGACGATGCCGTCGACCCGATGGACCTGCTGTTCTTCGATACCGAAACCACCGGCCTGGCCGGCGGTACCGGCACCCGC
GCCTTCATGATCGGCGTGGCCGACTGGGTCGTCGATGCCGTGCAAGGCAGCGGCCTGCGCGTGCGTCAACTGATGATGTC
CACGATGGCAGCCGAAAGCGCGATGCTGGATCTGTTCCGCACCTGGCTGACACCGCGCACCGTGCTGTCCAGCTACAACG
GTCGCTGCTACGACGCCCCGCTGCTGAAGACGCGCTACCGCCTGGCACGTCGCGGCGACCCGCTTTCTGCACTGGACCAT
GTGGACCTGCTGTTCCCCACCCGCCGGCGCTATCGCGGCACCTGGGAGAACTGCAAGCTCGCCACCATCGAACGGCAACT
GCTGCGCGTGGTACGCGAAGACGACCTGCCCGGCTCCGAGGCCCCGGCCGCCTGGTTGAGTTACCTGCGCGGCGGCAGCG
CGCGCAACCTGCGCCGCGTGGCCGAGCACAACCACCAGGATGTGGTGACGCTGTCGCTACTGATGCAACGGTTGGTGGCG
GTGGACGCGCAGGAGCGCAACGCGCTGACGTTGGCGTGCAGGCCTTGA

Upstream 100 bases:

>100_bases
AGTCGCTGGCGCTGACGGTGCTGGCGTTGTTGTTCGATGCCGATGCGCCGTTGCGGCATGCCACGCAGGTGGACGACGAC
CTGGCGCTGGACGTGCTTGC

Downstream 100 bases:

>100_bases
TCGGGTCTAGCGATTGAGGTGAGTCGGTGGTGTGGGGCAGAACGTCGGCTTGACTGACCCCACTACAGGGCGCTTGGCGC
ACGTTGCGTGCAATCCACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MSVSADRLRLLRRQAGQADVPAPAKADDGDALHDAAAVDAKAVDAAPVGEVAPPAAGADTQGRSPAPGHAPGVSAERLRL
LRRQVGGLTPAARKADAVMPTRAQRAAVPSAALPTARPPLRDNAAARHGAVAGRPNEARAASTRTPRALQSSIPAPPARD
ASVFAWVEHDVRHKPALPSTVDVDVDVDVDVDVDAIIAVDADGASHWPTARGTTTASPASMSPAHPAQRRTDIAGLRKMI
GLRERAVSAHAPVRAPSTDRSLPGNEIAPGLHLIQAFLPQAIPTEALSLAFAKRDDAVDPMDLLFFDTETTGLAGGTGTR
AFMIGVADWVVDAVQGSGLRVRQLMMSTMAAESAMLDLFRTWLTPRTVLSSYNGRCYDAPLLKTRYRLARRGDPLSALDH
VDLLFPTRRRYRGTWENCKLATIERQLLRVVREDDLPGSEAPAAWLSYLRGGSARNLRRVAEHNHQDVVTLSLLMQRLVA
VDAQERNALTLACRP

Sequences:

>Translated_495_residues
MSVSADRLRLLRRQAGQADVPAPAKADDGDALHDAAAVDAKAVDAAPVGEVAPPAAGADTQGRSPAPGHAPGVSAERLRL
LRRQVGGLTPAARKADAVMPTRAQRAAVPSAALPTARPPLRDNAAARHGAVAGRPNEARAASTRTPRALQSSIPAPPARD
ASVFAWVEHDVRHKPALPSTVDVDVDVDVDVDVDAIIAVDADGASHWPTARGTTTASPASMSPAHPAQRRTDIAGLRKMI
GLRERAVSAHAPVRAPSTDRSLPGNEIAPGLHLIQAFLPQAIPTEALSLAFAKRDDAVDPMDLLFFDTETTGLAGGTGTR
AFMIGVADWVVDAVQGSGLRVRQLMMSTMAAESAMLDLFRTWLTPRTVLSSYNGRCYDAPLLKTRYRLARRGDPLSALDH
VDLLFPTRRRYRGTWENCKLATIERQLLRVVREDDLPGSEAPAAWLSYLRGGSARNLRRVAEHNHQDVVTLSLLMQRLVA
VDAQERNALTLACRP
>Mature_494_residues
SVSADRLRLLRRQAGQADVPAPAKADDGDALHDAAAVDAKAVDAAPVGEVAPPAAGADTQGRSPAPGHAPGVSAERLRLL
RRQVGGLTPAARKADAVMPTRAQRAAVPSAALPTARPPLRDNAAARHGAVAGRPNEARAASTRTPRALQSSIPAPPARDA
SVFAWVEHDVRHKPALPSTVDVDVDVDVDVDVDAIIAVDADGASHWPTARGTTTASPASMSPAHPAQRRTDIAGLRKMIG
LRERAVSAHAPVRAPSTDRSLPGNEIAPGLHLIQAFLPQAIPTEALSLAFAKRDDAVDPMDLLFFDTETTGLAGGTGTRA
FMIGVADWVVDAVQGSGLRVRQLMMSTMAAESAMLDLFRTWLTPRTVLSSYNGRCYDAPLLKTRYRLARRGDPLSALDHV
DLLFPTRRRYRGTWENCKLATIERQLLRVVREDDLPGSEAPAAWLSYLRGGSARNLRRVAEHNHQDVVTLSLLMQRLVAV
DAQERNALTLACRP

Specific function: Unknown

COG id: COG3359

COG function: function code L; Predicted exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52887; Mature: 52755

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSADRLRLLRRQAGQADVPAPAKADDGDALHDAAAVDAKAVDAAPVGEVAPPAAGADT
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCHHHCCCCCCCCCCCCCCCCCC
QGRSPAPGHAPGVSAERLRLLRRQVGGLTPAARKADAVMPTRAQRAAVPSAALPTARPPL
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCC
RDNAAARHGAVAGRPNEARAASTRTPRALQSSIPAPPARDASVFAWVEHDVRHKPALPST
CCCCHHHCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCCCCEEEEEHHHHCCCCCCCCE
VDVDVDVDVDVDVDAIIAVDADGASHWPTARGTTTASPASMSPAHPAQRRTDIAGLRKMI
EEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
GLRERAVSAHAPVRAPSTDRSLPGNEIAPGLHLIQAFLPQAIPTEALSLAFAKRDDAVDP
HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
MDLLFFDTETTGLAGGTGTRAFMIGVADWVVDAVQGSGLRVRQLMMSTMAAESAMLDLFR
CEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
TWLTPRTVLSSYNGRCYDAPLLKTRYRLARRGDPLSALDHVDLLFPTRRRYRGTWENCKL
HHCCHHHHHHCCCCCEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCCCCCH
ATIERQLLRVVREDDLPGSEAPAAWLSYLRGGSARNLRRVAEHNHQDVVTLSLLMQRLVA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
VDAQERNALTLACRP
HCCCCCCEEEEEECC
>Mature Secondary Structure 
SVSADRLRLLRRQAGQADVPAPAKADDGDALHDAAAVDAKAVDAAPVGEVAPPAAGADT
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCHHHCCCCCCCCCCCCCCCCCC
QGRSPAPGHAPGVSAERLRLLRRQVGGLTPAARKADAVMPTRAQRAAVPSAALPTARPPL
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCC
RDNAAARHGAVAGRPNEARAASTRTPRALQSSIPAPPARDASVFAWVEHDVRHKPALPST
CCCCHHHCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCCCCEEEEEHHHHCCCCCCCCE
VDVDVDVDVDVDVDAIIAVDADGASHWPTARGTTTASPASMSPAHPAQRRTDIAGLRKMI
EEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
GLRERAVSAHAPVRAPSTDRSLPGNEIAPGLHLIQAFLPQAIPTEALSLAFAKRDDAVDP
HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
MDLLFFDTETTGLAGGTGTRAFMIGVADWVVDAVQGSGLRVRQLMMSTMAAESAMLDLFR
CEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
TWLTPRTVLSSYNGRCYDAPLLKTRYRLARRGDPLSALDHVDLLFPTRRRYRGTWENCKL
HHCCHHHHHHCCCCCEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCCCCCH
ATIERQLLRVVREDDLPGSEAPAAWLSYLRGGSARNLRRVAEHNHQDVVTLSLLMQRLVA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
VDAQERNALTLACRP
HCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 3145906 [H]