| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21240847
Identifier: 21240847
GI number: 21240847
Start: 87037
End: 87822
Strand: Reverse
Name: 21240847
Synonym: XAC0073
Alternate gene names: NA
Gene position: 87822-87037 (Counterclockwise)
Preceding gene: 77748503
Following gene: 77748502
Centisome position: 1.7
GC content: 63.87
Gene sequence:
>786_bases ATGTCGTCGTTTCTGGACACACGCATCAGCCGCCGTCACCTGATGGCTGCCACCGGCGCCTCGCTGCTGACCACCGGTCT GCCCACACGGGCCATGACGCCGCCGCCCTCGGATGTGGGCCGCAAGTTTCTGCGCTCGCGACGGCCGATGCCGTTTGCCG GCAATACCTTTGTGGGTCACCTGGAACAACAGGGCGATGGCTACGACAGCTTCGACCGCGTGCTGAATATCTACCGCCAA TTCCCCGAGCAGCGCTTTGCCCACAAGTTCGCCGTGCTGCCGCCGAGCAGCTACCACGTGACCTTGTTGGGCGGGGTCAA TGAGATCGACCGTGCGCGTGGGCCCTGGCCGAGCGATCTGCCGCGCGACCATGCCTTGGCGGACATCAACGTGGCCTATC TGGCGCGGTTGAAGGAGCGCGCCGCGCCGCCATTGGGCGCTTGCCGCTTCCTGGTCAACCCGACGGCAGTCAGGACCGGC AATAACGACAATCTGCTGATTCCGTTGAAGCCGGTCGACACGCAAACCGCGCAGCGCCTGGAAGCGGCGCGCCAAGCGCT GATGCAACTGACACGCTTGCAGCGCCCCGACTACACCAACTTCCAGTTTCATATTTCGCTGGCCTACCTGTGCGACACGC TGGATGCGGCAGAGCAGACGGCGTATCGCACTGCGGTGCGCGGCTGGCTCACACAGCTGGCAGCCGCGGGACCGATCACG GTGCCACGCTTTCATTTTTGTACGTTCAACGACATGGACGCGTTTCGCACGGTGCTAGAGGTCTGA
Upstream 100 bases:
>100_bases GAATACCGCATCGGCCGCCACCAGGAATACGTGCAATCGGCCTGGAAAATGGCACCCACCGTGATGCTCGGCGTCAACGT CAAACTCTGAGGGTTTTCCC
Downstream 100 bases:
>100_bases CGTTGCGTTGGGACGGCGACGCAGCGATGTGCGCCGGCCACGTGGTTTCGGAACTCCCCGCCGCGTACAGAGAGCTTGGT TTCCCGCCTGGTGTGGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSSFLDTRISRRHLMAATGASLLTTGLPTRAMTPPPSDVGRKFLRSRRPMPFAGNTFVGHLEQQGDGYDSFDRVLNIYRQ FPEQRFAHKFAVLPPSSYHVTLLGGVNEIDRARGPWPSDLPRDHALADINVAYLARLKERAAPPLGACRFLVNPTAVRTG NNDNLLIPLKPVDTQTAQRLEAARQALMQLTRLQRPDYTNFQFHISLAYLCDTLDAAEQTAYRTAVRGWLTQLAAAGPIT VPRFHFCTFNDMDAFRTVLEV
Sequences:
>Translated_261_residues MSSFLDTRISRRHLMAATGASLLTTGLPTRAMTPPPSDVGRKFLRSRRPMPFAGNTFVGHLEQQGDGYDSFDRVLNIYRQ FPEQRFAHKFAVLPPSSYHVTLLGGVNEIDRARGPWPSDLPRDHALADINVAYLARLKERAAPPLGACRFLVNPTAVRTG NNDNLLIPLKPVDTQTAQRLEAARQALMQLTRLQRPDYTNFQFHISLAYLCDTLDAAEQTAYRTAVRGWLTQLAAAGPIT VPRFHFCTFNDMDAFRTVLEV >Mature_260_residues SSFLDTRISRRHLMAATGASLLTTGLPTRAMTPPPSDVGRKFLRSRRPMPFAGNTFVGHLEQQGDGYDSFDRVLNIYRQF PEQRFAHKFAVLPPSSYHVTLLGGVNEIDRARGPWPSDLPRDHALADINVAYLARLKERAAPPLGACRFLVNPTAVRTGN NDNLLIPLKPVDTQTAQRLEAARQALMQLTRLQRPDYTNFQFHISLAYLCDTLDAAEQTAYRTAVRGWLTQLAAAGPITV PRFHFCTFNDMDAFRTVLEV
Specific function: Unknown
COG id: COG5255
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29253; Mature: 29122
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFLDTRISRRHLMAATGASLLTTGLPTRAMTPPPSDVGRKFLRSRRPMPFAGNTFVGH CCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHEH LEQQGDGYDSFDRVLNIYRQFPEQRFAHKFAVLPPSSYHVTLLGGVNEIDRARGPWPSDL HHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCHHHHCCCCCCCCC PRDHALADINVAYLARLKERAAPPLGACRFLVNPTAVRTGNNDNLLIPLKPVDTQTAQRL CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHEECCEEEEECCCCCEEEEECCCCHHHHHHH EAARQALMQLTRLQRPDYTNFQFHISLAYLCDTLDAAEQTAYRTAVRGWLTQLAAAGPIT HHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VPRFHFCTFNDMDAFRTVLEV CCCEEEEECCCHHHHHHHHCC >Mature Secondary Structure SSFLDTRISRRHLMAATGASLLTTGLPTRAMTPPPSDVGRKFLRSRRPMPFAGNTFVGH CCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHEH LEQQGDGYDSFDRVLNIYRQFPEQRFAHKFAVLPPSSYHVTLLGGVNEIDRARGPWPSDL HHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCHHHHCCCCCCCCC PRDHALADINVAYLARLKERAAPPLGACRFLVNPTAVRTGNNDNLLIPLKPVDTQTAQRL CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHEECCEEEEECCCCCEEEEECCCCHHHHHHH EAARQALMQLTRLQRPDYTNFQFHISLAYLCDTLDAAEQTAYRTAVRGWLTQLAAAGPIT HHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VPRFHFCTFNDMDAFRTVLEV CCCEEEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA