| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is nodL [H]
Identifier: 21244867
GI number: 21244867
Start: 4877137
End: 4877715
Strand: Reverse
Name: nodL [H]
Synonym: XAC4150
Alternate gene names: 21244867
Gene position: 4877715-4877137 (Counterclockwise)
Preceding gene: 21244868
Following gene: 21244866
Centisome position: 94.25
GC content: 66.84
Gene sequence:
>579_bases ATGCAGACCGAAAAACAGAAAATGCTGGCAGGCGAACTCTACAACGCCGCCGATGCGCAGCTGCAGGCCGATCAGGCGGC AGCTGCGGTGTGGATGGAGCGCTACAACGCCACTGGCGCGCAGTCATCGGCGCAGCGGCATGCATTGCTGGTCGAGCGGC TCGCCGAGGTGGGTGCGAATGCGGTGATCCGGCCGCCGTTTCATTGCGATTACGGCTACAACATCCATCTGGGCGCGGGC GTGTTCCTCAACTTCAATTGCGTGATCCTGGATATCTGCCAGGTGTACATCGGCGATGGCACGCAGGTGGGGCCAGCGGT GCAGTTCTACGCTGCCGACCATCCGCGCGATGCCGCCGGACGTGCCAGCGGGCTGGAGTTCGGGCGGCCAATCCGCGTCG GGCGCAATGTGTGGATTGGGGGCGGGGCGATCATCCTGCCGGGCGTCTGCATCGGCGACGATGCGGTAATCGGTGCCGGT GCGGTCGTCACGCGCGATGTGCCGGCCGGTGCGATCGCCGTGGGCAATCCGGCGCGCGTGCGCGCACCCCGGCTTGCCGA TGCGCCGCCCACCGACTGA
Upstream 100 bases:
>100_bases CTTTGAGCCGGCAATCGGGGCCATTGGTGCATCGCTCGATGCATACCGCGCTACATCCATGCCACCCTGTCAGCAGTTCA TTGCATAGGTGCCCGGCGGC
Downstream 100 bases:
>100_bases ACGCAACGAAGAAGAGCCGCTACAAAAAGCGATCGCGCAGCTGCCAGGCGGACGCGGCCGGTGCGATGCAGCGCATACGC GAACAGAGCAGTATCGAACG
Product: nodulation protein
Products: CoA; acetylmaltose [C]
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MQTEKQKMLAGELYNAADAQLQADQAAAAVWMERYNATGAQSSAQRHALLVERLAEVGANAVIRPPFHCDYGYNIHLGAG VFLNFNCVILDICQVYIGDGTQVGPAVQFYAADHPRDAAGRASGLEFGRPIRVGRNVWIGGGAIILPGVCIGDDAVIGAG AVVTRDVPAGAIAVGNPARVRAPRLADAPPTD
Sequences:
>Translated_192_residues MQTEKQKMLAGELYNAADAQLQADQAAAAVWMERYNATGAQSSAQRHALLVERLAEVGANAVIRPPFHCDYGYNIHLGAG VFLNFNCVILDICQVYIGDGTQVGPAVQFYAADHPRDAAGRASGLEFGRPIRVGRNVWIGGGAIILPGVCIGDDAVIGAG AVVTRDVPAGAIAVGNPARVRAPRLADAPPTD >Mature_192_residues MQTEKQKMLAGELYNAADAQLQADQAAAAVWMERYNATGAQSSAQRHALLVERLAEVGANAVIRPPFHCDYGYNIHLGAG VFLNFNCVILDICQVYIGDGTQVGPAVQFYAADHPRDAAGRASGLEFGRPIRVGRNVWIGGGAIILPGVCIGDDAVIGAG AVVTRDVPAGAIAVGNPARVRAPRLADAPPTD
Specific function: Acetyltransferase implicated in the O-acetylation of Nod factors [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1786664, Length=180, Percent_Identity=49.4444444444444, Blast_Score=189, Evalue=1e-49, Organism=Escherichia coli, GI1786537, Length=175, Percent_Identity=37.7142857142857, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1788367, Length=173, Percent_Identity=27.7456647398844, Blast_Score=60, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322243, Length=176, Percent_Identity=41.4772727272727, Blast_Score=151, Evalue=6e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: 2.3.1.79 [C]
Molecular weight: Translated: 20104; Mature: 20104
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTEKQKMLAGELYNAADAQLQADQAAAAVWMERYNATGAQSSAQRHALLVERLAEVGAN CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC AVIRPPFHCDYGYNIHLGAGVFLNFNCVILDICQVYIGDGTQVGPAVQFYAADHPRDAAG CEECCCCCCCCCCEEEECCEEEEECCCCEEEEHHHHCCCCCCCCCEEEEEECCCCCCCCC RASGLEFGRPIRVGRNVWIGGGAIILPGVCIGDDAVIGAGAVVTRDVPAGAIAVGNPARV CCCCCCCCCCEECCCEEEEECCEEEECCEEECCCCEECCCEEEEECCCCCEEEECCCCCC RAPRLADAPPTD CCCCCCCCCCCC >Mature Secondary Structure MQTEKQKMLAGELYNAADAQLQADQAAAAVWMERYNATGAQSSAQRHALLVERLAEVGAN CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC AVIRPPFHCDYGYNIHLGAGVFLNFNCVILDICQVYIGDGTQVGPAVQFYAADHPRDAAG CEECCCCCCCCCCEEEECCEEEEECCCCEEEEHHHHCCCCCCCCCEEEEEECCCCCCCCC RASGLEFGRPIRVGRNVWIGGGAIILPGVCIGDDAVIGAGAVVTRDVPAGAIAVGNPARV CCCCCCCCCCEECCCEEEEECCEEEECCEEECCCCEECCCEEEEECCCCCEEEECCCCCC RAPRLADAPPTD CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: 0.20 {glucose} 0.11 {maltose}
Km value (mM): 90 {maltose}} 62 {glucose}} 0.018 {acetyl-CoA}} 40 {triethanolamine}} [C]
Substrates: Acetyl-CoA; maltose [C]
Specific reaction: Acetyl-CoA + maltose = CoA + acetylmaltose [C]
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1558960; 8801423; 11481432 [H]