| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244866
Identifier: 21244866
GI number: 21244866
Start: 4876433
End: 4876879
Strand: Reverse
Name: 21244866
Synonym: XAC4149
Alternate gene names: NA
Gene position: 4876879-4876433 (Counterclockwise)
Preceding gene: 21244867
Following gene: 21244864
Centisome position: 94.23
GC content: 63.98
Gene sequence:
>447_bases ATGTACAAACGAATCCTGATCGCCATCGATGCATCCGAGCTCTCGCATCGCGGCCTGTTTCAAGGCCTGGAGCTGGCCAA GGCGACCGGTGCCAAAGTGGATATCGTCACCGTGTCCGAGCCGTGGGCGATGGGCATGTACGACGCAATGGGCTGGAGCG TGGGCTACGAGGCCAGCCCGGAATACCGCACCGAGCGCGAAGCGGCCGCTGAAAAGATCCTGCGTCCGGCGTTGGAGTTG GCCGCCGCTGCCAACATCAAGGCCACGCCGCGGCATGTGCTGGATCGCTTCGCGGCCGAGGGCATCGTGCAGACCGCCAA GGACTGCAAGAGCGATCTGATCATCATGACCTCGCACGGCCGCCGCGGCATGCAGCGCATGCTGCTCGGCAGCCAGACGG TGGAAGTGCTCACCCACAGTGCGATTCCGGTGCTGGTGATTCGCTGA
Upstream 100 bases:
>100_bases AGTCCCTCACCTGCAAGATTGATCCATCTCAAGGCCTGCGTTGCGGAGTGCTGTCAATCTCAAGTGCCGGCGAGGCTGCC GGCCCATCCGGGAGGTCATC
Downstream 100 bases:
>100_bases TGCCGAGACCACTGCCTTGTCTCGCCTAGGCGCGTACCCGGGCGCGCTGTGGCGTCCAGGTAATCCACGTCGCGCCCAGG TGCGCTCCCACGCAACTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain-Containing Protein; UspA Domain Protein; Universal Stress Protein Family; Universal Stress Protein UspA; Universal Stress Family Protein; Universal Stress Protein F; Universal Stress Protein UspA-Like Protein; Universal Stress Family; Uspa Domain Protein
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MYKRILIAIDASELSHRGLFQGLELAKATGAKVDIVTVSEPWAMGMYDAMGWSVGYEASPEYRTEREAAAEKILRPALEL AAAANIKATPRHVLDRFAAEGIVQTAKDCKSDLIIMTSHGRRGMQRMLLGSQTVEVLTHSAIPVLVIR
Sequences:
>Translated_148_residues MYKRILIAIDASELSHRGLFQGLELAKATGAKVDIVTVSEPWAMGMYDAMGWSVGYEASPEYRTEREAAAEKILRPALEL AAAANIKATPRHVLDRFAAEGIVQTAKDCKSDLIIMTSHGRRGMQRMLLGSQTVEVLTHSAIPVLVIR >Mature_148_residues MYKRILIAIDASELSHRGLFQGLELAKATGAKVDIVTVSEPWAMGMYDAMGWSVGYEASPEYRTEREAAAEKILRPALEL AAAANIKATPRHVLDRFAAEGIVQTAKDCKSDLIIMTSHGRRGMQRMLLGSQTVEVLTHSAIPVLVIR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16222; Mature: 16222
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKRILIAIDASELSHRGLFQGLELAKATGAKVDIVTVSEPWAMGMYDAMGWSVGYEASP CCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCC EYRTEREAAAEKILRPALELAAAANIKATPRHVLDRFAAEGIVQTAKDCKSDLIIMTSHG CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC RRGMQRMLLGSQTVEVLTHSAIPVLVIR HHHHHHHHHCHHHHHHHHCCCCEEEEEC >Mature Secondary Structure MYKRILIAIDASELSHRGLFQGLELAKATGAKVDIVTVSEPWAMGMYDAMGWSVGYEASP CCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCC EYRTEREAAAEKILRPALELAAAANIKATPRHVLDRFAAEGIVQTAKDCKSDLIIMTSHG CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC RRGMQRMLLGSQTVEVLTHSAIPVLVIR HHHHHHHHHCHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA