| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244665
Identifier: 21244665
GI number: 21244665
Start: 4639840
End: 4640757
Strand: Reverse
Name: 21244665
Synonym: XAC3946
Alternate gene names: NA
Gene position: 4640757-4639840 (Counterclockwise)
Preceding gene: 21244666
Following gene: 21244664
Centisome position: 89.67
GC content: 52.61
Gene sequence:
>918_bases ATGGTTAGAGTAGAGCTTGTCACCGAGAACTGCGATTCATCCAGCATCTACAAGCTCGAGGAGCTAGCCTCGGCCGAGAT TAAGATTCGGCTCGAATTTGATCGAATCGTGAGCGTGCAGTCCCAGAAATCGGCTCGCGACGAGCTCTGCTCGAATATTA GAAGATCTCTACAGGACTTCAATTGGATTTGCGCAGGGCAGGTTAACCTTGAGCTGCTTTGGTACCTGCACGCAACCCAA CGACAGGAAACCGACAAGATCGGCGACATCGACAACATCACCAAGCCGATCATTGATGCATTGACCGGCGAGAAGGGTCT GCTGATTGATGACTCACAAATCGGATCGATGCACAGCTTCTGGAACTCGCGTAATCATCAAACTGAGAAGGACGTCCTGA TCCTGCGAATTAAGTTTAATAATGACGAGTGCTTGAAGAAGGAGAGCCTCACCTTCATCCAGTATTCCTCTGCTGTCTGC CTTCCGATGAACGTTGATTTCAGAAGCATGCGCGACATTCTTGGTGCGCTCGCAGTGATAATGTTCAGAAGAGGCCAGCG TCGCTTGGCTGCAGAATTCAGACGCCAAGGGAATGACTTTGACCGAGCCCTGGTGAACTCGACGTGGGAATTCCACAGAA CCAGGCTGGGTGGAATGGACCCAGCAAGAATCTATAGGTTGAGAGAGTTCCTGGTTAAGTGCTACGAACACGGCCTTACT TGGAGGCTATTGTTGAGCCAATCCAAGTCGCTGAGAAGCTCGATCTCCGCTTCAAAGCGTGAGGATGGATCGACCAGGCC ATCGGGATCGGGGGCCGTAAGCGGCTTAATTGCTTGCGGCAGCGATGAGCGCGACGGGAAGGATCCACGCTGCGCCACAG CACGGTATTGCGACGCCTGTCAGGAAGCCACGGGATGA
Upstream 100 bases:
>100_bases TACATGTCTATAAACGTTGGACGATTCAGTGCAGCGATGTGACACTATCCGACTTGATGCAAGAGAACACCAGACACCCA TTCTTTCGCGATAGATCGCC
Downstream 100 bases:
>100_bases GGGCGGCGGGTCGATTACTCGGCTTGCTCCTTCAGTACGGGGGAGCTGTTTACGGGTCTGGCGTTGCCCCTTACGTGTTA TGAGGCCCCGCAGAAACTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MVRVELVTENCDSSSIYKLEELASAEIKIRLEFDRIVSVQSQKSARDELCSNIRRSLQDFNWICAGQVNLELLWYLHATQ RQETDKIGDIDNITKPIIDALTGEKGLLIDDSQIGSMHSFWNSRNHQTEKDVLILRIKFNNDECLKKESLTFIQYSSAVC LPMNVDFRSMRDILGALAVIMFRRGQRRLAAEFRRQGNDFDRALVNSTWEFHRTRLGGMDPARIYRLREFLVKCYEHGLT WRLLLSQSKSLRSSISASKREDGSTRPSGSGAVSGLIACGSDERDGKDPRCATARYCDACQEATG
Sequences:
>Translated_305_residues MVRVELVTENCDSSSIYKLEELASAEIKIRLEFDRIVSVQSQKSARDELCSNIRRSLQDFNWICAGQVNLELLWYLHATQ RQETDKIGDIDNITKPIIDALTGEKGLLIDDSQIGSMHSFWNSRNHQTEKDVLILRIKFNNDECLKKESLTFIQYSSAVC LPMNVDFRSMRDILGALAVIMFRRGQRRLAAEFRRQGNDFDRALVNSTWEFHRTRLGGMDPARIYRLREFLVKCYEHGLT WRLLLSQSKSLRSSISASKREDGSTRPSGSGAVSGLIACGSDERDGKDPRCATARYCDACQEATG >Mature_305_residues MVRVELVTENCDSSSIYKLEELASAEIKIRLEFDRIVSVQSQKSARDELCSNIRRSLQDFNWICAGQVNLELLWYLHATQ RQETDKIGDIDNITKPIIDALTGEKGLLIDDSQIGSMHSFWNSRNHQTEKDVLILRIKFNNDECLKKESLTFIQYSSAVC LPMNVDFRSMRDILGALAVIMFRRGQRRLAAEFRRQGNDFDRALVNSTWEFHRTRLGGMDPARIYRLREFLVKCYEHGLT WRLLLSQSKSLRSSISASKREDGSTRPSGSGAVSGLIACGSDERDGKDPRCATARYCDACQEATG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34715; Mature: 34715
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRVELVTENCDSSSIYKLEELASAEIKIRLEFDRIVSVQSQKSARDELCSNIRRSLQDF CEEEEEEECCCCCCHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC NWICAGQVNLELLWYLHATQRQETDKIGDIDNITKPIIDALTGEKGLLIDDSQIGSMHSF CEEEECCCCEEEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHH WNSRNHQTEKDVLILRIKFNNDECLKKESLTFIQYSSAVCLPMNVDFRSMRDILGALAVI HCCCCCCCCCCEEEEEEEECCCHHHHHHCCEEEEECCEEEEECCCCHHHHHHHHHHHHHH MFRRGQRRLAAEFRRQGNDFDRALVNSTWEFHRTRLGGMDPARIYRLREFLVKCYEHGLT HHHCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCE WRLLLSQSKSLRSSISASKREDGSTRPSGSGAVSGLIACGSDERDGKDPRCATARYCDAC EEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEECCCCCCCCCCCHHHHHHHHHH QEATG HHCCC >Mature Secondary Structure MVRVELVTENCDSSSIYKLEELASAEIKIRLEFDRIVSVQSQKSARDELCSNIRRSLQDF CEEEEEEECCCCCCHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC NWICAGQVNLELLWYLHATQRQETDKIGDIDNITKPIIDALTGEKGLLIDDSQIGSMHSF CEEEECCCCEEEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHH WNSRNHQTEKDVLILRIKFNNDECLKKESLTFIQYSSAVCLPMNVDFRSMRDILGALAVI HCCCCCCCCCCEEEEEEEECCCHHHHHHCCEEEEECCEEEEECCCCHHHHHHHHHHHHHH MFRRGQRRLAAEFRRQGNDFDRALVNSTWEFHRTRLGGMDPARIYRLREFLVKCYEHGLT HHHCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCE WRLLLSQSKSLRSSISASKREDGSTRPSGSGAVSGLIACGSDERDGKDPRCATARYCDAC EEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEECCCCCCCCCCCHHHHHHHHHH QEATG HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA