Click here to switch to the map view.

The map label for this gene is recF [C]

Identifier: 21244664

GI number: 21244664

Start: 4639395

End: 4639580

Strand: Reverse

Name: recF [C]

Synonym: XAC3945

Alternate gene names: 21244664

Gene position: 4639580-4639395 (Counterclockwise)

Preceding gene: 21244665

Following gene: 21244663

Centisome position: 89.64

GC content: 58.06

Gene sequence:

>186_bases
TTGGCAGAGCTGACCATCACGAACTTCCGCAAAATCAACAACGCAGTCCTGCACTTCCAGAGTGGACTGAACGTCCTGGT
CGGTGCAAACAACGCGGGGAAGACCGCCATTGTCGATGCGTTGAGGTCGCTCCTTGCCGGGCATGACGAACCTTACCCGC
GGTTGGGTAATCCCCCCGCCCATTAG

Upstream 100 bases:

>100_bases
CCGCAGGTAGATATGGCTGCCAGCCGGCCATCATCGTGCTGCAGCTAGGAAAAGGAGGGCGGCTACGCCGCCATGGGCAC
AAGGAGATATCAGCGTGTAT

Downstream 100 bases:

>100_bases
CAGACGCCAGAAGTGGAATTTTCTCGTACCCTTTCCCGAGGAGGTTCCATGAAGAAGTCCCGCTTTACCGACAGCCAGAT
CATCGCCGTGCTCAAGCAGG

Product: recombination-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MAELTITNFRKINNAVLHFQSGLNVLVGANNAGKTAIVDALRSLLAGHDEPYPRLGNPPAH

Sequences:

>Translated_61_residues
MAELTITNFRKINNAVLHFQSGLNVLVGANNAGKTAIVDALRSLLAGHDEPYPRLGNPPAH
>Mature_60_residues
AELTITNFRKINNAVLHFQSGLNVLVGANNAGKTAIVDALRSLLAGHDEPYPRLGNPPAH

Specific function: The Recf Protein Is Involved In DNA Metabolism; It Is Required For DNA Replication And Normal Sos Inducibility. Recf Binds Preferentially To Single-Stranded, Linear DNA. It Also Seems To Bind ATP. [C]

COG id: COG3593

COG function: function code L; Predicted ATP-dependent endonuclease of the OLD family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6520; Mature: 6388

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELTITNFRKINNAVLHFQSGLNVLVGANNAGKTAIVDALRSLLAGHDEPYPRLGNPPA
CCCCCCCHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
H
C
>Mature Secondary Structure 
AELTITNFRKINNAVLHFQSGLNVLVGANNAGKTAIVDALRSLLAGHDEPYPRLGNPPA
CCCCCCHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA