| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244666
Identifier: 21244666
GI number: 21244666
Start: 4641520
End: 4642101
Strand: Reverse
Name: 21244666
Synonym: XAC3947
Alternate gene names: NA
Gene position: 4642101-4641520 (Counterclockwise)
Preceding gene: 21244667
Following gene: 21244665
Centisome position: 89.69
GC content: 51.89
Gene sequence:
>582_bases TTGATTGACGAACCTGTTGTCTTTAGCGCGGATGCGCTCAATAGAATTGCCACCGCGCGTGCTCATCCCGCATACGATCA CACGATGTGGTCCGACGCAACTCTTGAGCCAGTCCGCGTCGAAGTCAGAGACCATTACCGACGCGTACAGCGCTTAGCGT GCGCGTACTGCCTCAACCTTCTGTCGATTAGATCGGCCATGGGCTCTCCCGTCGAACACATCGCCCCTAAGGCGATGTAC CTCGGATACATGTTTGAGCCTCTCAACCTGTGCGTCTGCTGTCCTGACTGTAATGAGTACAAGAGCAACAGAGAGGTTCA TGTTGATCCTCCCATTAAGGGTTACTTGCCTGTCGCTTATCCGAATGATCCAGAAAAGTTTAGAATCGTGCATCCGCACT TTGATGAGTACTCACAGCACATTAGACGAGCGGGAATCCTCTATATACCGTTGAGCGAGAAAGGCAGTTACACCTTCTAT GTCTGCCATCTCGGCCGCTATCTGAGCGAGCTAGGTATGACCGAAGAGCTATTTAACGACTTGAATGCCGTTATGCAGCG CCACCGGTTCCATGAGGGATAG
Upstream 100 bases:
>100_bases AGATCGACTGGCTGTTCGATGTGCGCTCGAAGCTTGACCCTAGCGACAAGCTAATAGCGTTGATCGACTCACTCTCGGCG CTTCTCAAGGAGGGGCGGTC
Downstream 100 bases:
>100_bases CGCGTGCCCAGCTGTGCAGAAGTTGGACTCACTGGCGTTCGGAGGTATTTCAGCCTGTTCGCGCTGTGCGAGGTGCCGGA TGTGGAATGGCCAGGCACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MIDEPVVFSADALNRIATARAHPAYDHTMWSDATLEPVRVEVRDHYRRVQRLACAYCLNLLSIRSAMGSPVEHIAPKAMY LGYMFEPLNLCVCCPDCNEYKSNREVHVDPPIKGYLPVAYPNDPEKFRIVHPHFDEYSQHIRRAGILYIPLSEKGSYTFY VCHLGRYLSELGMTEELFNDLNAVMQRHRFHEG
Sequences:
>Translated_193_residues MIDEPVVFSADALNRIATARAHPAYDHTMWSDATLEPVRVEVRDHYRRVQRLACAYCLNLLSIRSAMGSPVEHIAPKAMY LGYMFEPLNLCVCCPDCNEYKSNREVHVDPPIKGYLPVAYPNDPEKFRIVHPHFDEYSQHIRRAGILYIPLSEKGSYTFY VCHLGRYLSELGMTEELFNDLNAVMQRHRFHEG >Mature_193_residues MIDEPVVFSADALNRIATARAHPAYDHTMWSDATLEPVRVEVRDHYRRVQRLACAYCLNLLSIRSAMGSPVEHIAPKAMY LGYMFEPLNLCVCCPDCNEYKSNREVHVDPPIKGYLPVAYPNDPEKFRIVHPHFDEYSQHIRRAGILYIPLSEKGSYTFY VCHLGRYLSELGMTEELFNDLNAVMQRHRFHEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22333; Mature: 22333
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDEPVVFSADALNRIATARAHPAYDHTMWSDATLEPVRVEVRDHYRRVQRLACAYCLNL CCCCCCEECHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LSIRSAMGSPVEHIAPKAMYLGYMFEPLNLCVCCPDCNEYKSNREVHVDPPIKGYLPVAY HHHHHHHCCCHHHHCCHHHHHHHHCCCCCEEEECCCCHHHHCCCEEEECCCCCCCEECCC PNDPEKFRIVHPHFDEYSQHIRRAGILYIPLSEKGSYTFYVCHLGRYLSELGMTEELFND CCCCCCEEEECCCHHHHHHHHHHCCEEEEEECCCCCEEEEHHHHHHHHHHCCCHHHHHHH LNAVMQRHRFHEG HHHHHHHHHCCCC >Mature Secondary Structure MIDEPVVFSADALNRIATARAHPAYDHTMWSDATLEPVRVEVRDHYRRVQRLACAYCLNL CCCCCCEECHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LSIRSAMGSPVEHIAPKAMYLGYMFEPLNLCVCCPDCNEYKSNREVHVDPPIKGYLPVAY HHHHHHHCCCHHHHCCHHHHHHHHCCCCCEEEECCCCHHHHCCCEEEECCCCCCCEECCC PNDPEKFRIVHPHFDEYSQHIRRAGILYIPLSEKGSYTFYVCHLGRYLSELGMTEELFND CCCCCCEEEECCCHHHHHHHHHHCCEEEEEECCCCCEEEEHHHHHHHHHHCCCHHHHHHH LNAVMQRHRFHEG HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA