| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is yfeH [C]
Identifier: 21244601
GI number: 21244601
Start: 4560622
End: 4561623
Strand: Direct
Name: yfeH [C]
Synonym: XAC3877
Alternate gene names: 21244601
Gene position: 4560622-4561623 (Clockwise)
Preceding gene: 21244600
Following gene: 21244602
Centisome position: 88.12
GC content: 64.67
Gene sequence:
>1002_bases ATGAAGAAGCTGCTGGCGCGGTTGCGCATTGACCCCTTCACCCTCGCGCTGCTGTGCACGGTCGCACTGGCCTCGTTTCT CCCGGTCTCGGGTACGGCTGCTGCGGTCATGGACGATGTCACCGACGTGGCGATCGCGGCGCTGTTCTTCCTGCACGGCG CGCGGCTGTCGCGCGAAGCGGTCAAGGCCGGCGCGTTGCACTGGCGCCTGCATCTGGTGATTCTGGGCTGCACCTTCGTC CTGTTCCCGTTACTTGGGCTGTTGTTCAAACCACTGGCGCATCTGGTACTGACGCCGGAGCTGTATGTCGGCGTGCTGTT CCTGTGCGCGCTGCCGTCCACGGTGCAGTCCTCGATCGCGTTCACATCGATGGCGCGCGGCAATGTGCCGGCTGCGGTCT GCGCGGCTTCGCTTTCCAGCCTGCTGGGCGTGTTTTTCACCCCGTTGCTGATGGGCGCACTGGTCGGCAGCCAAGGCGCG ATGGCGCATCCGGCCGAGGCGATCGGCAAGATCCTGCTGCAATTGCTGGTGCCGTTTCTGGCCGGCCATTTCATGCGTCC GTGGATCGGCGGCTGGGTCGAACGCCATCGCGCCGTGCTGCGTTACACCGATCAAGGCACCATTCTGCTGGTGGTCTATA CCGCCTTCAGCGCATCGGTGAACGAAGGGCTGTGGCAGAAGACGCCGCTGCCTGCGCTGCTGGCGGTACTCGGCGCTGCA GCGTTGTTGTTGGCCATGGCGATGCTTTCGATCACCTGCATCGCGCGGCGCCTGCACTTCAGCCGCGCCGATGAAATCGC CATCGTCTTCTGCGGCTCGAAGAAGAGTTTGGCCACTGGCGTGCCGATGGCCAAGGTGATGTTTGCCGGCGGCGGGCTGG GCGCGATCGTGTTGCCGATCATGTTGTATCACCAGCTGCAGCTGATCGTCTGCGCCGTTGTGGCCGCACGTTATGCGCGC GGTGCCTCGGGCCAGCCGCAAGGCGCAACCGAGCGCCATTGA
Upstream 100 bases:
>100_bases GCCGGGCCGTTTCAGGCGTGAACGGTGGCGTCGATGCCACAGCACGCATCGTAGAATGGTCCATACCAGGCGCAAGATCG CGCGCTACCGTTGGATCTCG
Downstream 100 bases:
>100_bases CGATGCGCCGCGCCAGCGCCTGCCCGCTGCGCATTGCGTAACAGCAGTTCGCATCGCCGCAAATCCGGGTTGTAAGCAGA TGTACAACGGTTATGACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MKKLLARLRIDPFTLALLCTVALASFLPVSGTAAAVMDDVTDVAIAALFFLHGARLSREAVKAGALHWRLHLVILGCTFV LFPLLGLLFKPLAHLVLTPELYVGVLFLCALPSTVQSSIAFTSMARGNVPAAVCAASLSSLLGVFFTPLLMGALVGSQGA MAHPAEAIGKILLQLLVPFLAGHFMRPWIGGWVERHRAVLRYTDQGTILLVVYTAFSASVNEGLWQKTPLPALLAVLGAA ALLLAMAMLSITCIARRLHFSRADEIAIVFCGSKKSLATGVPMAKVMFAGGGLGAIVLPIMLYHQLQLIVCAVVAARYAR GASGQPQGATERH
Sequences:
>Translated_333_residues MKKLLARLRIDPFTLALLCTVALASFLPVSGTAAAVMDDVTDVAIAALFFLHGARLSREAVKAGALHWRLHLVILGCTFV LFPLLGLLFKPLAHLVLTPELYVGVLFLCALPSTVQSSIAFTSMARGNVPAAVCAASLSSLLGVFFTPLLMGALVGSQGA MAHPAEAIGKILLQLLVPFLAGHFMRPWIGGWVERHRAVLRYTDQGTILLVVYTAFSASVNEGLWQKTPLPALLAVLGAA ALLLAMAMLSITCIARRLHFSRADEIAIVFCGSKKSLATGVPMAKVMFAGGGLGAIVLPIMLYHQLQLIVCAVVAARYAR GASGQPQGATERH >Mature_333_residues MKKLLARLRIDPFTLALLCTVALASFLPVSGTAAAVMDDVTDVAIAALFFLHGARLSREAVKAGALHWRLHLVILGCTFV LFPLLGLLFKPLAHLVLTPELYVGVLFLCALPSTVQSSIAFTSMARGNVPAAVCAASLSSLLGVFFTPLLMGALVGSQGA MAHPAEAIGKILLQLLVPFLAGHFMRPWIGGWVERHRAVLRYTDQGTILLVVYTAFSASVNEGLWQKTPLPALLAVLGAA ALLLAMAMLSITCIARRLHFSRADEIAIVFCGSKKSLATGVPMAKVMFAGGGLGAIVLPIMLYHQLQLIVCAVVAARYAR GASGQPQGATERH
Specific function: Unknown
COG id: COG0385
COG function: function code R; Predicted Na+-dependent transporter
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfeH [H]
Homologues:
Organism=Homo sapiens, GI71725371, Length=334, Percent_Identity=27.5449101796407, Blast_Score=118, Evalue=6e-27, Organism=Escherichia coli, GI1788749, Length=322, Percent_Identity=54.0372670807453, Blast_Score=323, Evalue=7e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002657 - InterPro: IPR016833 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 35272; Mature: 35272
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLARLRIDPFTLALLCTVALASFLPVSGTAAAVMDDVTDVAIAALFFLHGARLSREA CHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKAGALHWRLHLVILGCTFVLFPLLGLLFKPLAHLVLTPELYVGVLFLCALPSTVQSSIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHH FTSMARGNVPAAVCAASLSSLLGVFFTPLLMGALVGSQGAMAHPAEAIGKILLQLLVPFL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH AGHFMRPWIGGWVERHRAVLRYTDQGTILLVVYTAFSASVNEGLWQKTPLPALLAVLGAA HHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHH ALLLAMAMLSITCIARRLHFSRADEIAIVFCGSKKSLATGVPMAKVMFAGGGLGAIVLPI HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHCCCCHHHHHHCCCCHHHHHHHH MLYHQLQLIVCAVVAARYARGASGQPQGATERH HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKKLLARLRIDPFTLALLCTVALASFLPVSGTAAAVMDDVTDVAIAALFFLHGARLSREA CHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKAGALHWRLHLVILGCTFVLFPLLGLLFKPLAHLVLTPELYVGVLFLCALPSTVQSSIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHH FTSMARGNVPAAVCAASLSSLLGVFFTPLLMGALVGSQGAMAHPAEAIGKILLQLLVPFL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH AGHFMRPWIGGWVERHRAVLRYTDQGTILLVVYTAFSASVNEGLWQKTPLPALLAVLGAA HHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHH ALLLAMAMLSITCIARRLHFSRADEIAIVFCGSKKSLATGVPMAKVMFAGGGLGAIVLPI HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHCCCCHHHHHHCCCCHHHHHHHH MLYHQLQLIVCAVVAARYARGASGQPQGATERH HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 1849605 [H]