| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244602
Identifier: 21244602
GI number: 21244602
Start: 4561794
End: 4563374
Strand: Direct
Name: 21244602
Synonym: XAC3878
Alternate gene names: NA
Gene position: 4561794-4563374 (Clockwise)
Preceding gene: 21244601
Following gene: 21244607
Centisome position: 88.14
GC content: 66.48
Gene sequence:
>1581_bases ATGACGCTGTCGCTGCGACGCCCTTCCCCATCCTTGATCGCGCTGCTGGCAGTGCTGGCTGCGCTGGCCGCCTGCAACAA ACCAGCACCGCCTGCGGCGCCCCCACAGCCCAAGACAGCGTCCACGCCGACAGCCGCTGCCGGCATCGCCTGGCGCGAGG GCGATGTGGAAGACGCTTTTGCCGAAGCCAAGGACAGCGGCAAGCCGATCCTGTTGTATTGGGGCGCAGCCTGGTGCCCG CCCTGCAATCGCCTCAAGGCCACGCTGTTCAAGGATCCGGCCTTCATCGCGCGCACCCAGCAATTTGTCGCCGTGCACCT GGACGGCGATTCCGAAGGCGCGCAGGCCTGGGGCGAGCGCTTCGGGGTCAAGGGCTATCCCACCATCATCGTGCTGCGCT CGGATCACAGCGAAATCACCCGGCTGGCAGGCGATGCCGATAACGCACGCCTGGCTGAGGTGTTGCGGGTTGCGGCCAAG AGCACCAGCACCGCCCAGCAACTGCTCGACAAGGCGCTGCACACGCCGCAACAGCTCAGCGCGGACGACTGGGCCGTGCT CGGCAACTATGCCTGGGGCACCGACGACCGGCTGGTCAAACCCGATGACGCCGCCGACGTGCTCACCCGGCTCTCGGCAT CGGCGCCACAGCCGGCACTGCAACGCAGCTTCGCCCTGGCCGCCATCAGTGCCGCCAAACACCCGCCGGCTGCCAGCAGC GCAAATCGCACGCTGCTGGAAACAGTGTTGGCCGACCCGGCAGAAGTGCGCGCCAATCTCGGCACGCTGAACTATGTGCC GGCGCGCCTGGTCACCGCCGCCAGCAATGAAGCCGGCGTGCGCAGCGCGCTCTCCAACGCACTGAATCAGGCCTTGGACA AGGTCTACGCCGATCCTTCATTGCCGATTTCCGACCGGCTTGGCACCGCGTATGCGCGCATCCAGCTGGCACGCCTGGCA CAAGGCCAGCCCACCGAAACCGAAGCCGAAGGCCCGCAACCGCCGCTGCCGAAAGACGTGGTGGAGGTCGTGCACCAGCG CGTGCAGTGGGCCACCGACACGGCCAAGACCGACGAGGAGCGCCAATCCACCATCAGCACGGCCGCCGCGTTGCTGAGCG AGGTCGGCGATCGCAGCGCGGCAGAGCAATTGCTGCTGGCCGAGTTGTCGCGCAGCAAGACCCCGTACTACTACATGCCC GAGTTGGCCGATCTGGCCGAACAACGCGGCGACAAGAAGACCGCCCTGTTGTGGCTCAAACGGGCCTACGACAGCGCGCA GGGCCCCGCCACACGCGTGCAGTGGGGCGTGATGTACGTAGATGGGCTGATCCGGCTCAGCCCGGACGATACTGCCGGCA TCGAGAGCGCCGCCGCCCAGGTGATTGGCGAGTTGGCCGGTCAACCGGATGGTTACCGGCAACGTACCCGTCAGCGCTTC ACCACCCTCGGCACCGCACTGAAGACCTGGAGCAAGCAGCACCGCCGCGAAGGCAGCGCAGTGCTGGCACGTCTGCAACA GAAAATGCAGTCCAGCTGCAACAGCAAAACTACCAGCGAGTGCGCCAGTTGGCTGAGTTGA
Upstream 100 bases:
>100_bases TGTAAGCAGATGTACAACGGTTATGACGCACTCCGGCCCTGGTCCGCCAGCGGCCGCTAGAGTGCGTGATCGACCTCCTG CCGCCCCACGGTGATTTGCC
Downstream 100 bases:
>100_bases GTCGTCACAGCTCTGCCGTGTGCTGGCAACGCGTGATGATCAGAAGCTTGCAAGCCGCAAACCGCGGCGCCTGCTGACGT GGACGCCGCTGGTGACCTCG
Product: disulphide-isomerase
Products: NA
Alternate protein names: Disulphide-Isomerase; Disulphide-Isomerase Oxidoreductase Protein; Thiol-Disulfide Isomerase And Thioredoxin; Lipoprotein
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MTLSLRRPSPSLIALLAVLAALAACNKPAPPAAPPQPKTASTPTAAAGIAWREGDVEDAFAEAKDSGKPILLYWGAAWCP PCNRLKATLFKDPAFIARTQQFVAVHLDGDSEGAQAWGERFGVKGYPTIIVLRSDHSEITRLAGDADNARLAEVLRVAAK STSTAQQLLDKALHTPQQLSADDWAVLGNYAWGTDDRLVKPDDAADVLTRLSASAPQPALQRSFALAAISAAKHPPAASS ANRTLLETVLADPAEVRANLGTLNYVPARLVTAASNEAGVRSALSNALNQALDKVYADPSLPISDRLGTAYARIQLARLA QGQPTETEAEGPQPPLPKDVVEVVHQRVQWATDTAKTDEERQSTISTAAALLSEVGDRSAAEQLLLAELSRSKTPYYYMP ELADLAEQRGDKKTALLWLKRAYDSAQGPATRVQWGVMYVDGLIRLSPDDTAGIESAAAQVIGELAGQPDGYRQRTRQRF TTLGTALKTWSKQHRREGSAVLARLQQKMQSSCNSKTTSECASWLS
Sequences:
>Translated_526_residues MTLSLRRPSPSLIALLAVLAALAACNKPAPPAAPPQPKTASTPTAAAGIAWREGDVEDAFAEAKDSGKPILLYWGAAWCP PCNRLKATLFKDPAFIARTQQFVAVHLDGDSEGAQAWGERFGVKGYPTIIVLRSDHSEITRLAGDADNARLAEVLRVAAK STSTAQQLLDKALHTPQQLSADDWAVLGNYAWGTDDRLVKPDDAADVLTRLSASAPQPALQRSFALAAISAAKHPPAASS ANRTLLETVLADPAEVRANLGTLNYVPARLVTAASNEAGVRSALSNALNQALDKVYADPSLPISDRLGTAYARIQLARLA QGQPTETEAEGPQPPLPKDVVEVVHQRVQWATDTAKTDEERQSTISTAAALLSEVGDRSAAEQLLLAELSRSKTPYYYMP ELADLAEQRGDKKTALLWLKRAYDSAQGPATRVQWGVMYVDGLIRLSPDDTAGIESAAAQVIGELAGQPDGYRQRTRQRF TTLGTALKTWSKQHRREGSAVLARLQQKMQSSCNSKTTSECASWLS >Mature_525_residues TLSLRRPSPSLIALLAVLAALAACNKPAPPAAPPQPKTASTPTAAAGIAWREGDVEDAFAEAKDSGKPILLYWGAAWCPP CNRLKATLFKDPAFIARTQQFVAVHLDGDSEGAQAWGERFGVKGYPTIIVLRSDHSEITRLAGDADNARLAEVLRVAAKS TSTAQQLLDKALHTPQQLSADDWAVLGNYAWGTDDRLVKPDDAADVLTRLSASAPQPALQRSFALAAISAAKHPPAASSA NRTLLETVLADPAEVRANLGTLNYVPARLVTAASNEAGVRSALSNALNQALDKVYADPSLPISDRLGTAYARIQLARLAQ GQPTETEAEGPQPPLPKDVVEVVHQRVQWATDTAKTDEERQSTISTAAALLSEVGDRSAAEQLLLAELSRSKTPYYYMPE LADLAEQRGDKKTALLWLKRAYDSAQGPATRVQWGVMYVDGLIRLSPDDTAGIESAAAQVIGELAGQPDGYRQRTRQRFT TLGTALKTWSKQHRREGSAVLARLQQKMQSSCNSKTTSECASWLS
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56441; Mature: 56310
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSLRRPSPSLIALLAVLAALAACNKPAPPAAPPQPKTASTPTAAAGIAWREGDVEDAF CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCEECCCCHHHHH AEAKDSGKPILLYWGAAWCPPCNRLKATLFKDPAFIARTQQFVAVHLDGDSEGAQAWGER HHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHCCCEEEEEEECCCCCHHHHHHHH FGVKGYPTIIVLRSDHSEITRLAGDADNARLAEVLRVAAKSTSTAQQLLDKALHTPQQLS CCCCCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHCC ADDWAVLGNYAWGTDDRLVKPDDAADVLTRLSASAPQPALQRSFALAAISAAKHPPAASS CCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC ANRTLLETVLADPAEVRANLGTLNYVPARLVTAASNEAGVRSALSNALNQALDKVYADPS CHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC LPISDRLGTAYARIQLARLAQGQPTETEAEGPQPPLPKDVVEVVHQRVQWATDTAKTDEE CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH RQSTISTAAALLSEVGDRSAAEQLLLAELSRSKTPYYYMPELADLAEQRGDKKTALLWLK HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCHHHHHHHH RAYDSAQGPATRVQWGVMYVDGLIRLSPDDTAGIESAAAQVIGELAGQPDGYRQRTRQRF HHHCCCCCCCHHHHHHHEEECCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH TTLGTALKTWSKQHRREGSAVLARLQQKMQSSCNSKTTSECASWLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure TLSLRRPSPSLIALLAVLAALAACNKPAPPAAPPQPKTASTPTAAAGIAWREGDVEDAF CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCEECCCCHHHHH AEAKDSGKPILLYWGAAWCPPCNRLKATLFKDPAFIARTQQFVAVHLDGDSEGAQAWGER HHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHCCCEEEEEEECCCCCHHHHHHHH FGVKGYPTIIVLRSDHSEITRLAGDADNARLAEVLRVAAKSTSTAQQLLDKALHTPQQLS CCCCCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHCC ADDWAVLGNYAWGTDDRLVKPDDAADVLTRLSASAPQPALQRSFALAAISAAKHPPAASS CCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC ANRTLLETVLADPAEVRANLGTLNYVPARLVTAASNEAGVRSALSNALNQALDKVYADPS CHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC LPISDRLGTAYARIQLARLAQGQPTETEAEGPQPPLPKDVVEVVHQRVQWATDTAKTDEE CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH RQSTISTAAALLSEVGDRSAAEQLLLAELSRSKTPYYYMPELADLAEQRGDKKTALLWLK HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCHHHHHHHH RAYDSAQGPATRVQWGVMYVDGLIRLSPDDTAGIESAAAQVIGELAGQPDGYRQRTRQRF HHHCCCCCCCHHHHHHHEEECCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH TTLGTALKTWSKQHRREGSAVLARLQQKMQSSCNSKTTSECASWLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA