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The map label for this gene is 21244564

Identifier: 21244564

GI number: 21244564

Start: 4519420

End: 4520286

Strand: Direct

Name: 21244564

Synonym: XAC3840

Alternate gene names: NA

Gene position: 4519420-4520286 (Clockwise)

Preceding gene: 21244563

Following gene: 21244565

Centisome position: 87.32

GC content: 60.9

Gene sequence:

>867_bases
ATGAGCGCCATCGCCCACCGCTATGAATTCGTCTATCTATTCGACGTGGCCAACGGTAACCCTAACGGTGACCCCGACGC
CGGCAACCTGCCGCGCCTGGACCCGGAGACCAATCGCGGCCTGGTGACCGACGTGGCGCTCAAGCGCAAGATCCGCAACT
ACGTGGCGCTGGAGAAAGACAACGCGCCGGGTTACACGATCTACATGCAGGAGAAATCGGTACTGAACAACCAGCACAAG
CAGGCCTACACCGCACTTGGCATCGAGCATGAAGCCAAGAAACTGCCCAAGGAGGGCGACAAAGCGCGCCAATTGACCGC
GTGGATGTGTGAAAACTTCTTCGACGTGCGCACCTTCGGTGCGGTGATGACCACCGAAGTCAATACCGGCCAGGTCCGCG
GCCCGGTGCAACTGGCCTTCGCCACTTCGGTCGAACCGGTATTGCCACTGGAAGTATCGATCACCCGCGTGGCGGTGACC
AACGAAAAAGACCTGGAGAAGGAGCGCACCATGGGCCGCAAGCACATTCTGCCCTACGGCCTGTATCGCGCGCATGGCTT
TGTGTCGGCAAAGCTGGCCGAGCGCACCGGGTTCTCCGAGGAAGACCTGCAACTGCTGTGGCGCGCATTGACCAATCTAT
TCGAGCACGACCGCTCCGCCGCGCGCGGCGAGATGGCCGCACGCAAACTGATCGTATTCGAACACGAACACCCGATGGGC
AACGCACCGGCGCATGTGCTCTTCGACAAGGTCAAGGTCGAGCGTATTGACCAGGCGGACCAGGGACCGGCACGCAGCTT
TTCCGATTACCGGGTGGTGATCGACCACGCGCTTCCTGCCGGCGTAAGCGTGACCGAACTGTTCTGA

Upstream 100 bases:

>100_bases
AAGGCCGTTTCGCCATCGGTTACTACCACCAGACCCAGGCGCGCTTCGCCCGCAACAACGGCCAGGACGCCCCCGACACC
GCTTCCGAAGGAGAACCCAC

Downstream 100 bases:

>100_bases
CAATCAGGAGAGCGGGACCATGGACGACGACGACCTGATCCCGCTCTCTGCCCTACAGCACTACCTATACTGCCCGCGCC
AATGCGCGCTGATCCATGTC

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Csd2 Family Protein; CRISPR-Associated Csh2 Family Protein; Csd2 Family CRISPR-Associated Protein; CRISPR-Associated Protein; CRISPR-Associated Protein Csh2 Family; Crispr-Associated Protein; Crispr-Protein; Cytoplasmic Protein; CRISPR-Associated Protein TM; Csh2 Family CRISPR-Associated Protein; CRISPR-Associated RAMP Csd3 Family Protein; CRISPR-Associated RAMP Protein Cmr1 Family; Cas2 Family CRISPR-Associated Protein; Csh Crispr-Associated Protein Csh2 Family; CRISPR-Associated Protein Csd3 Family

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSAIAHRYEFVYLFDVANGNPNGDPDAGNLPRLDPETNRGLVTDVALKRKIRNYVALEKDNAPGYTIYMQEKSVLNNQHK
QAYTALGIEHEAKKLPKEGDKARQLTAWMCENFFDVRTFGAVMTTEVNTGQVRGPVQLAFATSVEPVLPLEVSITRVAVT
NEKDLEKERTMGRKHILPYGLYRAHGFVSAKLAERTGFSEEDLQLLWRALTNLFEHDRSAARGEMAARKLIVFEHEHPMG
NAPAHVLFDKVKVERIDQADQGPARSFSDYRVVIDHALPAGVSVTELF

Sequences:

>Translated_288_residues
MSAIAHRYEFVYLFDVANGNPNGDPDAGNLPRLDPETNRGLVTDVALKRKIRNYVALEKDNAPGYTIYMQEKSVLNNQHK
QAYTALGIEHEAKKLPKEGDKARQLTAWMCENFFDVRTFGAVMTTEVNTGQVRGPVQLAFATSVEPVLPLEVSITRVAVT
NEKDLEKERTMGRKHILPYGLYRAHGFVSAKLAERTGFSEEDLQLLWRALTNLFEHDRSAARGEMAARKLIVFEHEHPMG
NAPAHVLFDKVKVERIDQADQGPARSFSDYRVVIDHALPAGVSVTELF
>Mature_287_residues
SAIAHRYEFVYLFDVANGNPNGDPDAGNLPRLDPETNRGLVTDVALKRKIRNYVALEKDNAPGYTIYMQEKSVLNNQHKQ
AYTALGIEHEAKKLPKEGDKARQLTAWMCENFFDVRTFGAVMTTEVNTGQVRGPVQLAFATSVEPVLPLEVSITRVAVTN
EKDLEKERTMGRKHILPYGLYRAHGFVSAKLAERTGFSEEDLQLLWRALTNLFEHDRSAARGEMAARKLIVFEHEHPMGN
APAHVLFDKVKVERIDQADQGPARSFSDYRVVIDHALPAGVSVTELF

Specific function: Unknown

COG id: COG3649

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32348; Mature: 32217

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIAHRYEFVYLFDVANGNPNGDPDAGNLPRLDPETNRGLVTDVALKRKIRNYVALEKD
CCCHHCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECC
NAPGYTIYMQEKSVLNNQHKQAYTALGIEHEAKKLPKEGDKARQLTAWMCENFFDVRTFG
CCCCEEEEEECHHHHCCHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
AVMTTEVNTGQVRGPVQLAFATSVEPVLPLEVSITRVAVTNEKDLEKERTMGRKHILPYG
EEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCHHHHHHHHCCHHHCCCCH
LYRAHGFVSAKLAERTGFSEEDLQLLWRALTNLFEHDRSAARGEMAARKLIVFEHEHPMG
HHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
NAPAHVLFDKVKVERIDQADQGPARSFSDYRVVIDHALPAGVSVTELF
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHCCC
>Mature Secondary Structure 
SAIAHRYEFVYLFDVANGNPNGDPDAGNLPRLDPETNRGLVTDVALKRKIRNYVALEKD
CCHHCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECC
NAPGYTIYMQEKSVLNNQHKQAYTALGIEHEAKKLPKEGDKARQLTAWMCENFFDVRTFG
CCCCEEEEEECHHHHCCHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
AVMTTEVNTGQVRGPVQLAFATSVEPVLPLEVSITRVAVTNEKDLEKERTMGRKHILPYG
EEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCHHHHHHHHCCHHHCCCCH
LYRAHGFVSAKLAERTGFSEEDLQLLWRALTNLFEHDRSAARGEMAARKLIVFEHEHPMG
HHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
NAPAHVLFDKVKVERIDQADQGPARSFSDYRVVIDHALPAGVSVTELF
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA