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The map label for this gene is 21244565

Identifier: 21244565

GI number: 21244565

Start: 4520450

End: 4520938

Strand: Direct

Name: 21244565

Synonym: XAC3841

Alternate gene names: NA

Gene position: 4520450-4520938 (Clockwise)

Preceding gene: 21244564

Following gene: 21244566

Centisome position: 87.34

GC content: 65.24

Gene sequence:

>489_bases
GTGGCACACACGCAGCGCAGGCGTGGCGTGCGCACCGTCACCGCGATGCCGCTGCTGGCGCTCGAACTGGGCATCACGGG
CAAGGCCGATGTGGTCGAGTTCCATCACGATCCCGCAGGGGAATTCGCGTTCCCCGTGGAGTACAAACGGGGCCGACCCA
AGTCGCACCGGGCCGATGAGGTACAGCTGTGTGCCCAGGCACTGTGTCTGGAGAGCATGCTCAAACGCCCAGTAGACGCC
GGCGCGCTGTTCTACGGGCAGCCTCGCAGGCGCAAGGATGTGGTCTTCGATCCAGCGCTGCGCGAGCTCACGCAGCGCAC
CATCGCCGAAACCCGTGCACTGCTGTCTCATGGGCTGACGCCCGGTGCGCGCTATGACAGCAAACGCTGCGATGCCTGTT
CATTGATCGACCTGTGTCAGCCGCGCCTGCTCGGCCGCGGCAGCGTGGACACCTGGCTGCGTCGACAACTCGATGCTGAA
GAGGAATGA

Upstream 100 bases:

>100_bases
CCTATACTGCCCGCGCCAATGCGCGCTGATCCATGTCGAACGGCAATGGGCAGAGAACAGGCACACCGCCGAAGGCCGGC
TGCTGCACGAACGTGCCGAT

Downstream 100 bases:

>100_bases
CGATGCGCCGCCAACTCAACACCCTGTATGTCACCACCGATGGTGCCTGGTTGCACAAGGACGGTGCCAATGTCGTCCTG
AATGTGGAGCGGCAAGAACG

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Exonuclease Cas4 Family Protein; RecB Family Exonuclease; CRISPR-Associated Exonuclease Cas4 Family; Endonuclease; Exonuclease RecB Family Protein; CRISPR-Associated Cas1 Family Protein; Cas4 Family CRISPR-Associated Protein; Exonuclease N; PE-PGRS Family Protein; CRISPR-Associated Cas1/Cas4 Family Protein; CRISPR-Associated RecB Family Exonuclease Cas4b; RecB Family Exonuclease Protein

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MAHTQRRRGVRTVTAMPLLALELGITGKADVVEFHHDPAGEFAFPVEYKRGRPKSHRADEVQLCAQALCLESMLKRPVDA
GALFYGQPRRRKDVVFDPALRELTQRTIAETRALLSHGLTPGARYDSKRCDACSLIDLCQPRLLGRGSVDTWLRRQLDAE
EE

Sequences:

>Translated_162_residues
MAHTQRRRGVRTVTAMPLLALELGITGKADVVEFHHDPAGEFAFPVEYKRGRPKSHRADEVQLCAQALCLESMLKRPVDA
GALFYGQPRRRKDVVFDPALRELTQRTIAETRALLSHGLTPGARYDSKRCDACSLIDLCQPRLLGRGSVDTWLRRQLDAE
EE
>Mature_161_residues
AHTQRRRGVRTVTAMPLLALELGITGKADVVEFHHDPAGEFAFPVEYKRGRPKSHRADEVQLCAQALCLESMLKRPVDAG
ALFYGQPRRRKDVVFDPALRELTQRTIAETRALLSHGLTPGARYDSKRCDACSLIDLCQPRLLGRGSVDTWLRRQLDAEE
E

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18237; Mature: 18106

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHTQRRRGVRTVTAMPLLALELGITGKADVVEFHHDPAGEFAFPVEYKRGRPKSHRADE
CCCCCHHCCCHHHHHHHHHHHHHCCCCCCHHEEECCCCCCCEECCCHHCCCCCCCCCHHH
VQLCAQALCLESMLKRPVDAGALFYGQPRRRKDVVFDPALRELTQRTIAETRALLSHGLT
HHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCC
PGARYDSKRCDACSLIDLCQPRLLGRGSVDTWLRRQLDAEEE
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
AHTQRRRGVRTVTAMPLLALELGITGKADVVEFHHDPAGEFAFPVEYKRGRPKSHRADE
CCCCHHCCCHHHHHHHHHHHHHCCCCCCHHEEECCCCCCCEECCCHHCCCCCCCCCHHH
VQLCAQALCLESMLKRPVDAGALFYGQPRRRKDVVFDPALRELTQRTIAETRALLSHGLT
HHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCC
PGARYDSKRCDACSLIDLCQPRLLGRGSVDTWLRRQLDAEEE
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA