| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243931
Identifier: 21243931
GI number: 21243931
Start: 3771752
End: 3772921
Strand: Reverse
Name: 21243931
Synonym: XAC3205
Alternate gene names: NA
Gene position: 3772921-3771752 (Counterclockwise)
Preceding gene: 21243932
Following gene: 21243930
Centisome position: 72.9
GC content: 65.13
Gene sequence:
>1170_bases GTGATTGGTCGGATGCGGGTTGTGCGGTGCATTGTGGGTGGTGCGTTAGTGCTGAGCGCTGGCGCCGCATGGTCGGCATC GTTCGACTGCAAGCAGGCGGGTACGCCGGTGGAAAGGCGGCTGTGCGCCGTGCCTGCGCTCGGTCAACTGGACGATCAAC TGGATGAGGCGTATCGCGGCGTGCTGGATACCGCGCCGCGTGACTCGCTCACGGCAGTACGCGATCAACAACGCGCCTGG TTGCGCCAGCGCAATGCCTGCGCGCAGGACGCCAAGGTGGATGACTGCCTGCGACGCAGTTTGAAGGCCAGGGTCGATGC GCTGGGCAAGATACTCGACGCCCAGCAGCAAACGCTGGACCGCATCATCGCCAGCATCCCGAAAACGCCAGCGGACGCTG CGCGCCAATTGCAGGGCTACGACGCGCCGCTGGCATCGGCATGGCTGGCGTATCTGCATCACTTCGTGCCTGCCGCAGGC GTGGATGCGGCGTTGGCGAACGCGCGTTTTGAAAGCGCACGCAAGGCGCTACGCAAGACCGACGATTTCGCGGCGTCCTT GCTCGACGATGTGGATGGCGCGCCTGCCATGCAACAGCAACAGCGTGTGCTGACCCTGTTGCGCATGTGGATCGAGCGCG AGGATCGTTCCGAGCGGCCGTATGTGCATTGCTTCATCTTCGCTGCAGTGGGCGAGCCGGCCTATGACGCGTTCGGTCCG CTCTATGGCTCGACACGCGACAGTTTCGCGCCGATCTGCGAGCCGCCTGGTGGGCTGTTCGCGCGACCGAGCTGGAAACA GCTGGATGCCGGGTTTGCAGGGCTGATCGAAGCCTTGAGCAAGGACGCGGGCACCATTCGCTACGCCAGCTACGCGGAGT GGCAAATCATCGCGCTGCGCGCTGCCGTGTCGCCGGCATTGTATCTGCAGCCGGAATTGCGCAAGCGCTACGGCAACGAT CCGGATCAGGCGATTGCTGCGTGGTCCGGCGAGGACAGCGACTGGCCGGTAGCCGAGCGCAACGCCGTGCGCGCGCTGTT GCCCAAGGTGCGCGCAGAGACAGCCGCCTGGCTGGCAAGCGAAAAGCGCATGCCGGCCAGGCAGGCCGAACAGGTTGCCG CTGCCATTGTCGCGGCCTGGGTGAATGCGCGGTTGGATTTCGCGGGCTAA
Upstream 100 bases:
>100_bases TGGCGCGGGTGATCAGCTGGCAGTTCGTCGGTGCCTATGTGACCCTGGCGGCGACGCTGTTGTTGCTGTCGCTGCTGCCA GCGCGCAAGGAGGCGTTGCA
Downstream 100 bases:
>100_bases GTGAAGTGGATCGCGCAGCGGAGGTTCTTCCGGTTCGCTGTCGGGCCCTGGCCCGCCCACCATCGCAGGACACGCTGCAA GTCCGTCCCTGTAGCTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MIGRMRVVRCIVGGALVLSAGAAWSASFDCKQAGTPVERRLCAVPALGQLDDQLDEAYRGVLDTAPRDSLTAVRDQQRAW LRQRNACAQDAKVDDCLRRSLKARVDALGKILDAQQQTLDRIIASIPKTPADAARQLQGYDAPLASAWLAYLHHFVPAAG VDAALANARFESARKALRKTDDFAASLLDDVDGAPAMQQQQRVLTLLRMWIEREDRSERPYVHCFIFAAVGEPAYDAFGP LYGSTRDSFAPICEPPGGLFARPSWKQLDAGFAGLIEALSKDAGTIRYASYAEWQIIALRAAVSPALYLQPELRKRYGND PDQAIAAWSGEDSDWPVAERNAVRALLPKVRAETAAWLASEKRMPARQAEQVAAAIVAAWVNARLDFAG
Sequences:
>Translated_389_residues MIGRMRVVRCIVGGALVLSAGAAWSASFDCKQAGTPVERRLCAVPALGQLDDQLDEAYRGVLDTAPRDSLTAVRDQQRAW LRQRNACAQDAKVDDCLRRSLKARVDALGKILDAQQQTLDRIIASIPKTPADAARQLQGYDAPLASAWLAYLHHFVPAAG VDAALANARFESARKALRKTDDFAASLLDDVDGAPAMQQQQRVLTLLRMWIEREDRSERPYVHCFIFAAVGEPAYDAFGP LYGSTRDSFAPICEPPGGLFARPSWKQLDAGFAGLIEALSKDAGTIRYASYAEWQIIALRAAVSPALYLQPELRKRYGND PDQAIAAWSGEDSDWPVAERNAVRALLPKVRAETAAWLASEKRMPARQAEQVAAAIVAAWVNARLDFAG >Mature_389_residues MIGRMRVVRCIVGGALVLSAGAAWSASFDCKQAGTPVERRLCAVPALGQLDDQLDEAYRGVLDTAPRDSLTAVRDQQRAW LRQRNACAQDAKVDDCLRRSLKARVDALGKILDAQQQTLDRIIASIPKTPADAARQLQGYDAPLASAWLAYLHHFVPAAG VDAALANARFESARKALRKTDDFAASLLDDVDGAPAMQQQQRVLTLLRMWIEREDRSERPYVHCFIFAAVGEPAYDAFGP LYGSTRDSFAPICEPPGGLFARPSWKQLDAGFAGLIEALSKDAGTIRYASYAEWQIIALRAAVSPALYLQPELRKRYGND PDQAIAAWSGEDSDWPVAERNAVRALLPKVRAETAAWLASEKRMPARQAEQVAAAIVAAWVNARLDFAG
Specific function: Unknown
COG id: COG4461
COG function: function code S; Uncharacterized protein conserved in bacteria, putative lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42531; Mature: 42531
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGRMRVVRCIVGGALVLSAGAAWSASFDCKQAGTPVERRLCAVPALGQLDDQLDEAYRG CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHH VLDTAPRDSLTAVRDQQRAWLRQRNACAQDAKVDDCLRRSLKARVDALGKILDAQQQTLD HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIIASIPKTPADAARQLQGYDAPLASAWLAYLHHFVPAAGVDAALANARFESARKALRKT HHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DDFAASLLDDVDGAPAMQQQQRVLTLLRMWIEREDRSERPYVHCFIFAAVGEPAYDAFGP HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHCC LYGSTRDSFAPICEPPGGLFARPSWKQLDAGFAGLIEALSKDAGTIRYASYAEWQIIALR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCEEECCCCCCHHEEHH AAVSPALYLQPELRKRYGNDPDQAIAAWSGEDSDWPVAERNAVRALLPKVRAETAAWLAS HHHCCHHEECHHHHHHCCCCHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EKRMPARQAEQVAAAIVAAWVNARLDFAG HCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIGRMRVVRCIVGGALVLSAGAAWSASFDCKQAGTPVERRLCAVPALGQLDDQLDEAYRG CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHH VLDTAPRDSLTAVRDQQRAWLRQRNACAQDAKVDDCLRRSLKARVDALGKILDAQQQTLD HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIIASIPKTPADAARQLQGYDAPLASAWLAYLHHFVPAAGVDAALANARFESARKALRKT HHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DDFAASLLDDVDGAPAMQQQQRVLTLLRMWIEREDRSERPYVHCFIFAAVGEPAYDAFGP HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHCC LYGSTRDSFAPICEPPGGLFARPSWKQLDAGFAGLIEALSKDAGTIRYASYAEWQIIALR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCEEECCCCCCHHEEHH AAVSPALYLQPELRKRYGNDPDQAIAAWSGEDSDWPVAERNAVRALLPKVRAETAAWLAS HHHCCHHEECHHHHHHCCCCHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EKRMPARQAEQVAAAIVAAWVNARLDFAG HCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA