| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243932
Identifier: 21243932
GI number: 21243932
Start: 3772918
End: 3774519
Strand: Reverse
Name: 21243932
Synonym: XAC3206
Alternate gene names: NA
Gene position: 3774519-3772918 (Counterclockwise)
Preceding gene: 77748707
Following gene: 21243931
Centisome position: 72.93
GC content: 68.04
Gene sequence:
>1602_bases ATGTCGGCTCCTTCTTCGCGTCCTGCGGCCCCGCCGCGCTGGTTCGTCGCTGGCGATCTCAATGGCTTCTTCGGCCTGGT GGTCGACAACCTGTCCATCCTCGGCTTCATCGCGATGGCCTTGGTCGGCATCTTCCAGTTCCCGGCCGAGGTGGTATTCG CGCGCATGTTCCCCGGCACCGCATTCGGTGTGCTGGTGGGCAACCTGCTGTACACCTTGATGGCGCGGCGGCTGGCCGCG CGCACCGGGCGCGACGACGTCACCGCCATGCCGCTGGGCCTGGACGCGCCCACCAGCATCGGCATGGCGCTGCTGGTGCT CGGCCCGGCATTTGCCGGTTTCAAGGCGCAGGGGCTGGACCCGCAGGCCGCCGCGATCGCCACCTGGAAACTCGGCATGG CCGCGTTGGTGGTGATGGGCCTGCTCAAGCTGGTGCTGTCGTTCGCAGGCGAAGCGGTGACGCGCGCGCTGCCGCGTGCG GCCCTGCTCGGTTCCATCGCCGGTATCGCGCTGGTGCTGATGGGCTTGCTGCCATTGCTGGAAACGCTCCGTTCGCCGGT GGCCGGCTTCGTCACCCTGGGCCTGCTGCTGTACGTGCTGCTCGCCAAGGGCCGCCTCCCGACCAAATTGCCCGGCGTGC TGGTGGCGTTCGTGATCGGCACCGCGTTGTATTACGGGCTTGGCCTGGCGGGATGGGGTGCCCCCGGCTTCGCCTTGCCG GCGTGGAATCCGCCGCAGATCGTGCTGCCGCTGCCGACGCTGGGCTTTATCGACGGCCTGCCGGCCACGGTGGCGTACCT GCCGTTGCTGTTGCCGTTCGGCTTGTTGATGGTGGTGGGCGGCATCAACGTCAGCGAGAGCGCGCGCGCGGCAGGCGACG ATTACCGCACCCGCGACATCCTGCTGGTGGAAGCCTTGGCCACGCTGGTGGCCGGCGTCTGCGGCGGCGTCGCGCAGACC ACGCCGTACATCGGCCAGCCCGCGTACAAACACATGGGCGCGCGCTCCGGTTATACGCTGCTGACCGGGGTGTTCGTCGG GATCGGCGGCATGCTTGGCGTGATCAGCGGCCTGGTGCAATGGCTGCCGCTGGCCGTGCTGGCGCCGATCATCGTGTATG TCTCCATCGATATCACCACCCAGGCATTTCAGGCCACGCCCAAGCAGCACGCCGGCGCGATGGTGCTGGGCTTTCTGCCG TCGGTCGCGTACCTGCTGACCATCAAGGCGCCGGGCTGGATTGCGCCGGATCAGCTGGTCGCGCTGACCACCAAGGTCGA TGGCCACGGCCTGCCGGAGCTGGCAGTCATCTTCGCGCTGGGCAATGGCTTCATCATCACCGCGATGCTGTGGATCGCCA CGGTGGCGGCGATGATCGATGGCCGCTTGCGACGCGGCGCGGTCTTCCTGCTGGTGGCTGCCGGGCTGACCCTGTTCGGC CTGATCCATTCGGTGGACCCGCGCGGCGGCATCTATCTGCCGTGGTCGCTGCAAGGCCTGGCGCGGGTGATCAGCTGGCA GTTCGTCGGTGCCTATGTGACCCTGGCGGCGACGCTGTTGTTGCTGTCGCTGCTGCCAGCGCGCAAGGAGGCGTTGCAGT GA
Upstream 100 bases:
>100_bases CGATGGCCTCTGGCCACGACACGCTCTGATCCACCGCGCCGCTGTCGCCCCTGCAGTGCAGCGGCTAACATCGGCCGACC CCCACGCTTCCTTGGTTCTC
Downstream 100 bases:
>100_bases TTGGTCGGATGCGGGTTGTGCGGTGCATTGTGGGTGGTGCGTTAGTGCTGAGCGCTGGCGCCGCATGGTCGGCATCGTTC GACTGCAAGCAGGCGGGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: Permease; MFS Transporter Xanthine/Uracil Permease; Permease Subfamily Putative; Sulphate Transporter; Regulator; Transcriptional Regulator; Permease Subfamily
Number of amino acids: Translated: 533; Mature: 532
Protein sequence:
>533_residues MSAPSSRPAAPPRWFVAGDLNGFFGLVVDNLSILGFIAMALVGIFQFPAEVVFARMFPGTAFGVLVGNLLYTLMARRLAA RTGRDDVTAMPLGLDAPTSIGMALLVLGPAFAGFKAQGLDPQAAAIATWKLGMAALVVMGLLKLVLSFAGEAVTRALPRA ALLGSIAGIALVLMGLLPLLETLRSPVAGFVTLGLLLYVLLAKGRLPTKLPGVLVAFVIGTALYYGLGLAGWGAPGFALP AWNPPQIVLPLPTLGFIDGLPATVAYLPLLLPFGLLMVVGGINVSESARAAGDDYRTRDILLVEALATLVAGVCGGVAQT TPYIGQPAYKHMGARSGYTLLTGVFVGIGGMLGVISGLVQWLPLAVLAPIIVYVSIDITTQAFQATPKQHAGAMVLGFLP SVAYLLTIKAPGWIAPDQLVALTTKVDGHGLPELAVIFALGNGFIITAMLWIATVAAMIDGRLRRGAVFLLVAAGLTLFG LIHSVDPRGGIYLPWSLQGLARVISWQFVGAYVTLAATLLLLSLLPARKEALQ
Sequences:
>Translated_533_residues MSAPSSRPAAPPRWFVAGDLNGFFGLVVDNLSILGFIAMALVGIFQFPAEVVFARMFPGTAFGVLVGNLLYTLMARRLAA RTGRDDVTAMPLGLDAPTSIGMALLVLGPAFAGFKAQGLDPQAAAIATWKLGMAALVVMGLLKLVLSFAGEAVTRALPRA ALLGSIAGIALVLMGLLPLLETLRSPVAGFVTLGLLLYVLLAKGRLPTKLPGVLVAFVIGTALYYGLGLAGWGAPGFALP AWNPPQIVLPLPTLGFIDGLPATVAYLPLLLPFGLLMVVGGINVSESARAAGDDYRTRDILLVEALATLVAGVCGGVAQT TPYIGQPAYKHMGARSGYTLLTGVFVGIGGMLGVISGLVQWLPLAVLAPIIVYVSIDITTQAFQATPKQHAGAMVLGFLP SVAYLLTIKAPGWIAPDQLVALTTKVDGHGLPELAVIFALGNGFIITAMLWIATVAAMIDGRLRRGAVFLLVAAGLTLFG LIHSVDPRGGIYLPWSLQGLARVISWQFVGAYVTLAATLLLLSLLPARKEALQ >Mature_532_residues SAPSSRPAAPPRWFVAGDLNGFFGLVVDNLSILGFIAMALVGIFQFPAEVVFARMFPGTAFGVLVGNLLYTLMARRLAAR TGRDDVTAMPLGLDAPTSIGMALLVLGPAFAGFKAQGLDPQAAAIATWKLGMAALVVMGLLKLVLSFAGEAVTRALPRAA LLGSIAGIALVLMGLLPLLETLRSPVAGFVTLGLLLYVLLAKGRLPTKLPGVLVAFVIGTALYYGLGLAGWGAPGFALPA WNPPQIVLPLPTLGFIDGLPATVAYLPLLLPFGLLMVVGGINVSESARAAGDDYRTRDILLVEALATLVAGVCGGVAQTT PYIGQPAYKHMGARSGYTLLTGVFVGIGGMLGVISGLVQWLPLAVLAPIIVYVSIDITTQAFQATPKQHAGAMVLGFLPS VAYLLTIKAPGWIAPDQLVALTTKVDGHGLPELAVIFALGNGFIITAMLWIATVAAMIDGRLRRGAVFLLVAAGLTLFGL IHSVDPRGGIYLPWSLQGLARVISWQFVGAYVTLAATLLLLSLLPARKEALQ
Specific function: Unknown
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55470; Mature: 55339
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPSSRPAAPPRWFVAGDLNGFFGLVVDNLSILGFIAMALVGIFQFPAEVVFARMFPGT CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AFGVLVGNLLYTLMARRLAARTGRDDVTAMPLGLDAPTSIGMALLVLGPAFAGFKAQGLD HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCC PQAAAIATWKLGMAALVVMGLLKLVLSFAGEAVTRALPRAALLGSIAGIALVLMGLLPLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETLRSPVAGFVTLGLLLYVLLAKGRLPTKLPGVLVAFVIGTALYYGLGLAGWGAPGFALP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AWNPPQIVLPLPTLGFIDGLPATVAYLPLLLPFGLLMVVGGINVSESARAAGDDYRTRDI CCCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHH LLVEALATLVAGVCGGVAQTTPYIGQPAYKHMGARSGYTLLTGVFVGIGGMLGVISGLVQ HHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WLPLAVLAPIIVYVSIDITTQAFQATPKQHAGAMVLGFLPSVAYLLTIKAPGWIAPDQLV HHHHHHHHHHHHHHEECCCHHHHHCCCHHHCCHHHHHHHHHHHHHEEECCCCCCCCCHHE ALTTKVDGHGLPELAVIFALGNGFIITAMLWIATVAAMIDGRLRRGAVFLLVAAGLTLFG EEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH LIHSVDPRGGIYLPWSLQGLARVISWQFVGAYVTLAATLLLLSLLPARKEALQ HHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAPSSRPAAPPRWFVAGDLNGFFGLVVDNLSILGFIAMALVGIFQFPAEVVFARMFPGT CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AFGVLVGNLLYTLMARRLAARTGRDDVTAMPLGLDAPTSIGMALLVLGPAFAGFKAQGLD HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCC PQAAAIATWKLGMAALVVMGLLKLVLSFAGEAVTRALPRAALLGSIAGIALVLMGLLPLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETLRSPVAGFVTLGLLLYVLLAKGRLPTKLPGVLVAFVIGTALYYGLGLAGWGAPGFALP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AWNPPQIVLPLPTLGFIDGLPATVAYLPLLLPFGLLMVVGGINVSESARAAGDDYRTRDI CCCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHH LLVEALATLVAGVCGGVAQTTPYIGQPAYKHMGARSGYTLLTGVFVGIGGMLGVISGLVQ HHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WLPLAVLAPIIVYVSIDITTQAFQATPKQHAGAMVLGFLPSVAYLLTIKAPGWIAPDQLV HHHHHHHHHHHHHHEECCCHHHHHCCCHHHCCHHHHHHHHHHHHHEEECCCCCCCCCHHE ALTTKVDGHGLPELAVIFALGNGFIITAMLWIATVAAMIDGRLRRGAVFLLVAAGLTLFG EEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH LIHSVDPRGGIYLPWSLQGLARVISWQFVGAYVTLAATLLLLSLLPARKEALQ HHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA