| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243930
Identifier: 21243930
GI number: 21243930
Start: 3770592
End: 3771410
Strand: Reverse
Name: 21243930
Synonym: XAC3204
Alternate gene names: NA
Gene position: 3771410-3770592 (Counterclockwise)
Preceding gene: 21243931
Following gene: 21243927
Centisome position: 72.87
GC content: 66.06
Gene sequence:
>819_bases ATGCAAAGCAAATCCTCGCGCTGGCCGTGGTTGTTGGCGGTCCCATTGATGGCTGGCGCCGCGTGGTGGTTGTTCAGCGG CCCGCCCGATCCGCAGGGCACCTTGCCTGCACCCATCAGCCGTACCGCCAGTGCTGTGGCCGCCGCGGTCAGCCCACAGC CGACGCCCGTAAATAGCGAGCCACGTCACCCGGTGCCGGCAGCGTCGGACGACGCGGCGGATGCTGCAATTCCTGCGTTG GCGCAAAGCGACGCTGCCGCGTGGCAAGCGCTGCTGGCGTTGGTGCAGGACGATGACGCGTTGTCGATCGTGTTGCGCAA GCACCTGATCGAACGCGTGGTGGTGATGATCGACAATCTCACCCAGCCCAGTATCAGCCGCCGTGCCTCGGTGTTGCAGC CGGTGCCTGGCGAGTTGCAGGTCTCTGGCGAAGGCGATCATCAGGTGCTCGATCAGGCCAATGCGGCGCGCTATGCACCT TACGTAGCCGCGTTCACCGGCGTGGACGCGCAAGCCATGGCGCGCAGCTATGTGCGCTTTTACCCACTGTTTCAGCAGGC GTACGCGGATCTGGGCGCGCCGGATCGTTACTTCAACGACCGCGTCGTCGATGTGATCGACCACCTGCTGCGCACGCCCG AGCCGACGCAGCCGATCGCCGTGCAACGCGATGACCGTGGCCGCTACCGATTCGTCGCCCCATCGCTGGAGTCGCTGTCG GTGGGGCAGAAGGCGCTGCTGCGGCTGGGACCGACGCAGGCGACAGCAGTCAAAACGCAACTGCAGCGGATTCGCACGGC CCTGCTGCAGGGGCGCTGA
Upstream 100 bases:
>100_bases TCAACTCAAGCGGCTAAACGAGCGACACCGTAAATCGATGGAACCACCGCAGCATCCCACGGTCACACCTTGGGATGTTG TCGATGTCAGGAGTTCCACG
Downstream 100 bases:
>100_bases GGCCGCTGGCGTCCCACTCCTCTGACGCCAAAGCCCGCACGCCAGACTGCCGTGCGGCTTTCGCACATAAGTGAGTACGT CGGTACATCGACTCATGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MQSKSSRWPWLLAVPLMAGAAWWLFSGPPDPQGTLPAPISRTASAVAAAVSPQPTPVNSEPRHPVPAASDDAADAAIPAL AQSDAAAWQALLALVQDDDALSIVLRKHLIERVVVMIDNLTQPSISRRASVLQPVPGELQVSGEGDHQVLDQANAARYAP YVAAFTGVDAQAMARSYVRFYPLFQQAYADLGAPDRYFNDRVVDVIDHLLRTPEPTQPIAVQRDDRGRYRFVAPSLESLS VGQKALLRLGPTQATAVKTQLQRIRTALLQGR
Sequences:
>Translated_272_residues MQSKSSRWPWLLAVPLMAGAAWWLFSGPPDPQGTLPAPISRTASAVAAAVSPQPTPVNSEPRHPVPAASDDAADAAIPAL AQSDAAAWQALLALVQDDDALSIVLRKHLIERVVVMIDNLTQPSISRRASVLQPVPGELQVSGEGDHQVLDQANAARYAP YVAAFTGVDAQAMARSYVRFYPLFQQAYADLGAPDRYFNDRVVDVIDHLLRTPEPTQPIAVQRDDRGRYRFVAPSLESLS VGQKALLRLGPTQATAVKTQLQRIRTALLQGR >Mature_272_residues MQSKSSRWPWLLAVPLMAGAAWWLFSGPPDPQGTLPAPISRTASAVAAAVSPQPTPVNSEPRHPVPAASDDAADAAIPAL AQSDAAAWQALLALVQDDDALSIVLRKHLIERVVVMIDNLTQPSISRRASVLQPVPGELQVSGEGDHQVLDQANAARYAP YVAAFTGVDAQAMARSYVRFYPLFQQAYADLGAPDRYFNDRVVDVIDHLLRTPEPTQPIAVQRDDRGRYRFVAPSLESLS VGQKALLRLGPTQATAVKTQLQRIRTALLQGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29451; Mature: 29451
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSKSSRWPWLLAVPLMAGAAWWLFSGPPDPQGTLPAPISRTASAVAAAVSPQPTPVNSE CCCCCCCCCEEEEHHHHHCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC PRHPVPAASDDAADAAIPALAQSDAAAWQALLALVQDDDALSIVLRKHLIERVVVMIDNL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC TQPSISRRASVLQPVPGELQVSGEGDHQVLDQANAARYAPYVAAFTGVDAQAMARSYVRF CCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHCCHHHHCHHHHHHCCCCHHHHHHHHHHH YPLFQQAYADLGAPDRYFNDRVVDVIDHLLRTPEPTQPIAVQRDDRGRYRFVAPSLESLS HHHHHHHHHHCCCCCHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCHHHHH VGQKALLRLGPTQATAVKTQLQRIRTALLQGR HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQSKSSRWPWLLAVPLMAGAAWWLFSGPPDPQGTLPAPISRTASAVAAAVSPQPTPVNSE CCCCCCCCCEEEEHHHHHCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC PRHPVPAASDDAADAAIPALAQSDAAAWQALLALVQDDDALSIVLRKHLIERVVVMIDNL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC TQPSISRRASVLQPVPGELQVSGEGDHQVLDQANAARYAPYVAAFTGVDAQAMARSYVRF CCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHCCHHHHCHHHHHHCCCCHHHHHHHHHHH YPLFQQAYADLGAPDRYFNDRVVDVIDHLLRTPEPTQPIAVQRDDRGRYRFVAPSLESLS HHHHHHHHHHCCCCCHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCHHHHH VGQKALLRLGPTQATAVKTQLQRIRTALLQGR HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA