| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yhjG [H]
Identifier: 21243771
GI number: 21243771
Start: 3561584
End: 3563530
Strand: Direct
Name: yhjG [H]
Synonym: XAC3044
Alternate gene names: 21243771
Gene position: 3561584-3563530 (Clockwise)
Preceding gene: 21243770
Following gene: 21243775
Centisome position: 68.82
GC content: 64.61
Gene sequence:
>1947_bases GTGCCCTCCTCTCCCGCTGCTTCGCCCACCCGCGTATCGCGCCGTCGCCGCTGGTGGATCGGGCTCGGCATCGTTGCTGC GCTCGTGGCGATCTTCGTCCTGCTGTTCGACTGGAACTGGTTACGCGGGCCGGTGGAACGCGCAGTCAGTGCGAAGACCG GGCGCGAATTTCATCTTGGTCATCTGGATGTCGATCTGGGCCGCATCACCACGGTGCGTGGCGAGCGATTGAGCCTGGGC AATGCATCGTGGTCCAAGCGCGGCGCAATGGCAGAACTGAATGCGGCAGAGATCGATGTCGAATTCTGGCCACTGCTGCG CGGCAAGCTGCGGTTGCCGGAGATCCGGCTGGAGCACCCCACGCTGTTGCTGGAAGCCGGCAACGACAGCCATCCCGGTA ACTGGGTCTTCGACCAGAGCGATGGCGACGGCAGCATGCCGCGCCTGGGCCGCCTGTTGGTTACCAACGGGCGGCTGCAA TATATCGACGATGCCACCCGCTCGGATGTGGATGTGGCCATCAACAGCCTGGCACCGCCCAGCAGCGACCAGCGCGCCGC ACCGATCGGCATCGACGGTGAGGGCCGCTGGAAAGGCTATCCATTCTCGCTCAAGGGCAACACCGCCTCGCCGCTGGAAT TGAGCCAAAGCGAACATCCTTTCCGCATCGATCTGCGCGGCAGCGCGGGCGCCACGCGGACGCATGTGCGCGGCACGTTG ACCAATCCATTCCAGTTCCGGGTGTTCGACCTGCAGATGGCGCTCAGCGGCCAGGATATGGAAGACCTCTATCCGCTGAT CGGCGTCGCGATGCCATCTACGCCCCCTTACAAGCTGGACGGCCGCTTGCGCCGCGATGGCGATGTCTGGCGCTATGAAA AGTTCACCGGCACTGCCGGCGACAGCGATCTTTCCGGCACTGCAGAAATCGACCTGCGCAACAAGCGCCCGTTCCTGCGC GCAGACCTGGCTTCCAAACGACTGGATTTCGACGACCTGGCCGGTTTCGTTGGCGCGCCGCCCAAGACCGGCAACAACGA ATCGGCAAACGCCGAGCAGAAAAAGCAGGCCGCGCAGCTTGCCACCAGCGCGCGCGTTCTGCCGACAACGCCGTACGACC TGTCCAAATTGCGCGCAATGGACGCGCAGGTGCGTTGGCGCGCACAGCGCATCAACGCACCGTCCTGGCCACTGGACGAC ATGGACGCCTCGTTGACGTTGAAGGACGGCCTGCTGCGGCTGGATCCATTGAACTTCGGCGTCGCCGGCGGCGACATTCG CTTCACCATCGGCATGGACGCGCGCAAAGCAGTCATCACCACCCAACTGAAGGCGAGCATTCGCGGCATTCGTCTGGATC AGCTGTTTCCCGATGCCACGCTCGCCAAGCAGGCCTCGGGGGCGATCGGCGGCGAGCTGGATCTGCGTGGCCGCGGCAAC TCCATCGCCGCGATGCTCGGCAGCGCCGATGGCAGCATCGGCGTCGGCATGGGCCGCGGCCATGTCGGCAACCTGATCAT GGAGCTGGCCGGCCTGGACATCGCCGAATCGCTGAAATACCTGCTCACCAAGGACCGCCAGATTCCCGTGCGCTGCATCT TCGGCGACTTCGGCGTACAGGACGGGCTGATGCAGTCGCGAGCACTGGCTTTCGATAGCACCGACACGATCATCGTCGGC GAAGGCAACATCAGCCTCAAGAACGAAACACTCGATCTGCTGCTGCGCCCGCGCCCGAAAGATCGCAGCATCCTCAGCCT GCGCTCGCCGTTGCGGATCGGCGGCACTTTCAAGGACCCAAGCTTCCGCCCCGACTTCAAGGCGCTAGGCGTGCGCGGCG CGATCGCGGTCGCACTCGGCAGCATCGCACCACCGGCTGCCCTGCTGGCGACCTTCGAACCGGGCCCGGGCAAAGACAGC GACTGCGGCGGCAAATACGCGCAGTAA
Upstream 100 bases:
>100_bases CACTTCGTTGCGGTGATTGCGCAGGTGATGTGATCTGTGACCAACAGCGCGTTCGCGCGCCGTGCACGAGCCATCGCCAA CCATTGCGCACGTGAATAAC
Downstream 100 bases:
>100_bases TGCAGCGCAGCGTCAGCTGGCGATGTAACGCTGCAGCTGGTCGATATCTTGTTGCTGCGCTTCGATCACTGCCTTGACCA GGTCGCCAATCGAAATCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 648; Mature: 647
Protein sequence:
>648_residues MPSSPAASPTRVSRRRRWWIGLGIVAALVAIFVLLFDWNWLRGPVERAVSAKTGREFHLGHLDVDLGRITTVRGERLSLG NASWSKRGAMAELNAAEIDVEFWPLLRGKLRLPEIRLEHPTLLLEAGNDSHPGNWVFDQSDGDGSMPRLGRLLVTNGRLQ YIDDATRSDVDVAINSLAPPSSDQRAAPIGIDGEGRWKGYPFSLKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTL TNPFQFRVFDLQMALSGQDMEDLYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAGDSDLSGTAEIDLRNKRPFLR ADLASKRLDFDDLAGFVGAPPKTGNNESANAEQKKQAAQLATSARVLPTTPYDLSKLRAMDAQVRWRAQRINAPSWPLDD MDASLTLKDGLLRLDPLNFGVAGGDIRFTIGMDARKAVITTQLKASIRGIRLDQLFPDATLAKQASGAIGGELDLRGRGN SIAAMLGSADGSIGVGMGRGHVGNLIMELAGLDIAESLKYLLTKDRQIPVRCIFGDFGVQDGLMQSRALAFDSTDTIIVG EGNISLKNETLDLLLRPRPKDRSILSLRSPLRIGGTFKDPSFRPDFKALGVRGAIAVALGSIAPPAALLATFEPGPGKDS DCGGKYAQ
Sequences:
>Translated_648_residues MPSSPAASPTRVSRRRRWWIGLGIVAALVAIFVLLFDWNWLRGPVERAVSAKTGREFHLGHLDVDLGRITTVRGERLSLG NASWSKRGAMAELNAAEIDVEFWPLLRGKLRLPEIRLEHPTLLLEAGNDSHPGNWVFDQSDGDGSMPRLGRLLVTNGRLQ YIDDATRSDVDVAINSLAPPSSDQRAAPIGIDGEGRWKGYPFSLKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTL TNPFQFRVFDLQMALSGQDMEDLYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAGDSDLSGTAEIDLRNKRPFLR ADLASKRLDFDDLAGFVGAPPKTGNNESANAEQKKQAAQLATSARVLPTTPYDLSKLRAMDAQVRWRAQRINAPSWPLDD MDASLTLKDGLLRLDPLNFGVAGGDIRFTIGMDARKAVITTQLKASIRGIRLDQLFPDATLAKQASGAIGGELDLRGRGN SIAAMLGSADGSIGVGMGRGHVGNLIMELAGLDIAESLKYLLTKDRQIPVRCIFGDFGVQDGLMQSRALAFDSTDTIIVG EGNISLKNETLDLLLRPRPKDRSILSLRSPLRIGGTFKDPSFRPDFKALGVRGAIAVALGSIAPPAALLATFEPGPGKDS DCGGKYAQ >Mature_647_residues PSSPAASPTRVSRRRRWWIGLGIVAALVAIFVLLFDWNWLRGPVERAVSAKTGREFHLGHLDVDLGRITTVRGERLSLGN ASWSKRGAMAELNAAEIDVEFWPLLRGKLRLPEIRLEHPTLLLEAGNDSHPGNWVFDQSDGDGSMPRLGRLLVTNGRLQY IDDATRSDVDVAINSLAPPSSDQRAAPIGIDGEGRWKGYPFSLKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTLT NPFQFRVFDLQMALSGQDMEDLYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAGDSDLSGTAEIDLRNKRPFLRA DLASKRLDFDDLAGFVGAPPKTGNNESANAEQKKQAAQLATSARVLPTTPYDLSKLRAMDAQVRWRAQRINAPSWPLDDM DASLTLKDGLLRLDPLNFGVAGGDIRFTIGMDARKAVITTQLKASIRGIRLDQLFPDATLAKQASGAIGGELDLRGRGNS IAAMLGSADGSIGVGMGRGHVGNLIMELAGLDIAESLKYLLTKDRQIPVRCIFGDFGVQDGLMQSRALAFDSTDTIIVGE GNISLKNETLDLLLRPRPKDRSILSLRSPLRIGGTFKDPSFRPDFKALGVRGAIAVALGSIAPPAALLATFEPGPGKDSD CGGKYAQ
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=666, Percent_Identity=30.4804804804805, Blast_Score=284, Evalue=1e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 70316; Mature: 70185
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSPAASPTRVSRRRRWWIGLGIVAALVAIFVLLFDWNWLRGPVERAVSAKTGREFHLG CCCCCCCCCHHHHHHHEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE HLDVDLGRITTVRGERLSLGNASWSKRGAMAELNAAEIDVEFWPLLRGKLRLPEIRLEHP EEEEECCEEEEECCCEEECCCCCCCCCCCEEECCCEEEEEEEEHHCCCCCCCCEEEECCC TLLLEAGNDSHPGNWVFDQSDGDGSMPRLGRLLVTNGRLQYIDDATRSDVDVAINSLAPP EEEEECCCCCCCCCEEEECCCCCCCCCHHCEEEEECCCEEEECCCCCCCHHHHHHCCCCC SSDQRAAPIGIDGEGRWKGYPFSLKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTL CCCCCCCCEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEE TNPFQFRVFDLQMALSGQDMEDLYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAG CCCEEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEEEECCCCC DSDLSGTAEIDLRNKRPFLRADLASKRLDFDDLAGFVGAPPKTGNNESANAEQKKQAAQL CCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH ATSARVLPTTPYDLSKLRAMDAQVRWRAQRINAPSWPLDDMDASLTLKDGLLRLDPLNFG HHCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEECCCCCC VAGGDIRFTIGMDARKAVITTQLKASIRGIRLDQLFPDATLAKQASGAIGGELDLRGRGN CCCCCEEEEECCCCCHHHHHHHHHHHHCCEEHHHCCCCHHHHHHHCCCCCCEEEECCCCC SIAAMLGSADGSIGVGMGRGHVGNLIMELAGLDIAESLKYLLTKDRQIPVRCIFGDFGVQ EEEEEEECCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCC DGLMQSRALAFDSTDTIIVGEGNISLKNETLDLLLRPRPKDRSILSLRSPLRIGGTFKDP HHHHHHHEEEECCCCEEEEECCCEEECCCEEEEEECCCCCCCCCEECCCCCEECCCCCCC SFRPDFKALGVRGAIAVALGSIAPPAALLATFEPGPGKDSDCGGKYAQ CCCCCHHHHCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure PSSPAASPTRVSRRRRWWIGLGIVAALVAIFVLLFDWNWLRGPVERAVSAKTGREFHLG CCCCCCCCHHHHHHHEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE HLDVDLGRITTVRGERLSLGNASWSKRGAMAELNAAEIDVEFWPLLRGKLRLPEIRLEHP EEEEECCEEEEECCCEEECCCCCCCCCCCEEECCCEEEEEEEEHHCCCCCCCCEEEECCC TLLLEAGNDSHPGNWVFDQSDGDGSMPRLGRLLVTNGRLQYIDDATRSDVDVAINSLAPP EEEEECCCCCCCCCEEEECCCCCCCCCHHCEEEEECCCEEEECCCCCCCHHHHHHCCCCC SSDQRAAPIGIDGEGRWKGYPFSLKGNTASPLELSQSEHPFRIDLRGSAGATRTHVRGTL CCCCCCCCEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEE TNPFQFRVFDLQMALSGQDMEDLYPLIGVAMPSTPPYKLDGRLRRDGDVWRYEKFTGTAG CCCEEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEEEECCCCC DSDLSGTAEIDLRNKRPFLRADLASKRLDFDDLAGFVGAPPKTGNNESANAEQKKQAAQL CCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH ATSARVLPTTPYDLSKLRAMDAQVRWRAQRINAPSWPLDDMDASLTLKDGLLRLDPLNFG HHCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEECCCCCC VAGGDIRFTIGMDARKAVITTQLKASIRGIRLDQLFPDATLAKQASGAIGGELDLRGRGN CCCCCEEEEECCCCCHHHHHHHHHHHHCCEEHHHCCCCHHHHHHHCCCCCCEEEECCCCC SIAAMLGSADGSIGVGMGRGHVGNLIMELAGLDIAESLKYLLTKDRQIPVRCIFGDFGVQ EEEEEEECCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCC DGLMQSRALAFDSTDTIIVGEGNISLKNETLDLLLRPRPKDRSILSLRSPLRIGGTFKDP HHHHHHHEEEECCCCEEEEECCCEEECCCEEEEEECCCCCCCCCEECCCCCEECCCCCCC SFRPDFKALGVRGAIAVALGSIAPPAALLATFEPGPGKDSDCGGKYAQ CCCCCHHHHCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]