| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is hslO [H]
Identifier: 21243775
GI number: 21243775
Start: 3565795
End: 3566685
Strand: Direct
Name: hslO [H]
Synonym: XAC3048
Alternate gene names: 21243775
Gene position: 3565795-3566685 (Clockwise)
Preceding gene: 21243771
Following gene: 21243776
Centisome position: 68.9
GC content: 68.24
Gene sequence:
>891_bases ATGACCGATCACGATCAGCTTTCCCGTTTCCTGCTGCCCGCCGCTGGCGTGCGCGGCGTCCATGTGCGCCTGACCAGGGC CTGGCACGACATCCAGGGTGCCGCCGAGTATCCGCCCGCCGCGCGCCAACTGCTCGGCGAAGCTGCGGTGGCCGCTGCAC TGTTCACCGGCCACACCAAGGTCGACGGGCGCCTGTCGGTGCAACTGCGCGGCAACGACATCCTGCGCACCCTGTTTGCC GAATGCACCGCGGCCGGCACCTTGCGCGGCATCGTGCAGTTGGCCGAGGGCGCGGATGCGCCGACCGACCTGCGCGAACT GGGCGAGGCCGCGCTGCTGGCGATCACCATCGAGAACCCCGGCCTGGACCCGCGCGAGCCGCAGCGCTACCAGAGTCTGG TCGGCATGCAGGCACCGGACCTGGCCGAAGCGTTCGAAACCTATTTCCAGCAGTCCGAACAGTTGCCGACGCGCTTGCTG CTGGCCGCTGGCCCGGATCAGGCCGCCGGCCTGCTGTTGCAGAAGCTCCCCGGCGACGAAGGCGACACCGATGGCTGGAC CCGGATTGGCGCCCTGTTCGACACCCTGGGCGCACCGGAGCTGCTCTCGGTCGCCGGCCAGGACCTGCTGCACCGTCTGT TCCACGAGGAAGAGCCGCAGTTGCTCGGCAGCAAACCGCTCAGCTTCGGCTGCTCCTGTTCGCGCGAGCGGGTCGCCTCG ATGCTGCAATCGCTAGGCGAGGAAGAGGCGCGCGCGGCCGCCGAGGCAACGGGCGAAGTCGAGGTGCGTTGCGAATTCTG CGGCCGTGAGTATCACTTTCCGTTGACCGCGCTGGACGTACTTTTCAACGCGGCGCAGCCCTCGCAGGAAGCGCCAGAAA GGTTGCAATAG
Upstream 100 bases:
>100_bases TTGCCATCCCATGCATCCGTCCCCATTGTTCGCTACGACCTTCAATCCCGATGCCTGCCGCATTATCCGGCAACCAGCGT CCCTTACGCCCGATGTTTCC
Downstream 100 bases:
>100_bases ATAGGATGACGGTTGCGTTCTTGGGGGGACGCGACCACTTGTTAAATAATCATAAACACCCTAGCATCCTACTTGCCCGC TCTCGGGAACTTAACAACTG
Product: heat shock protein
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTDHDQLSRFLLPAAGVRGVHVRLTRAWHDIQGAAEYPPAARQLLGEAAVAAALFTGHTKVDGRLSVQLRGNDILRTLFA ECTAAGTLRGIVQLAEGADAPTDLRELGEAALLAITIENPGLDPREPQRYQSLVGMQAPDLAEAFETYFQQSEQLPTRLL LAAGPDQAAGLLLQKLPGDEGDTDGWTRIGALFDTLGAPELLSVAGQDLLHRLFHEEEPQLLGSKPLSFGCSCSRERVAS MLQSLGEEEARAAAEATGEVEVRCEFCGREYHFPLTALDVLFNAAQPSQEAPERLQ
Sequences:
>Translated_296_residues MTDHDQLSRFLLPAAGVRGVHVRLTRAWHDIQGAAEYPPAARQLLGEAAVAAALFTGHTKVDGRLSVQLRGNDILRTLFA ECTAAGTLRGIVQLAEGADAPTDLRELGEAALLAITIENPGLDPREPQRYQSLVGMQAPDLAEAFETYFQQSEQLPTRLL LAAGPDQAAGLLLQKLPGDEGDTDGWTRIGALFDTLGAPELLSVAGQDLLHRLFHEEEPQLLGSKPLSFGCSCSRERVAS MLQSLGEEEARAAAEATGEVEVRCEFCGREYHFPLTALDVLFNAAQPSQEAPERLQ >Mature_295_residues TDHDQLSRFLLPAAGVRGVHVRLTRAWHDIQGAAEYPPAARQLLGEAAVAAALFTGHTKVDGRLSVQLRGNDILRTLFAE CTAAGTLRGIVQLAEGADAPTDLRELGEAALLAITIENPGLDPREPQRYQSLVGMQAPDLAEAFETYFQQSEQLPTRLLL AAGPDQAAGLLLQKLPGDEGDTDGWTRIGALFDTLGAPELLSVAGQDLLHRLFHEEEPQLLGSKPLSFGCSCSRERVASM LQSLGEEEARAAAEATGEVEVRCEFCGREYHFPLTALDVLFNAAQPSQEAPERLQ
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=292, Percent_Identity=33.2191780821918, Blast_Score=174, Evalue=8e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - InterPro: IPR023212 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 31958; Mature: 31827
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHDQLSRFLLPAAGVRGVHVRLTRAWHDIQGAAEYPPAARQLLGEAAVAAALFTGHTK CCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCE VDGRLSVQLRGNDILRTLFAECTAAGTLRGIVQLAEGADAPTDLRELGEAALLAITIENP ECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEEECCC GLDPREPQRYQSLVGMQAPDLAEAFETYFQQSEQLPTRLLLAAGPDQAAGLLLQKLPGDE CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCC GDTDGWTRIGALFDTLGAPELLSVAGQDLLHRLFHEEEPQLLGSKPLSFGCSCSRERVAS CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHH MLQSLGEEEARAAAEATGEVEVRCEFCGREYHFPLTALDVLFNAAQPSQEAPERLQ HHHHHCHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHCC >Mature Secondary Structure TDHDQLSRFLLPAAGVRGVHVRLTRAWHDIQGAAEYPPAARQLLGEAAVAAALFTGHTK CCHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCE VDGRLSVQLRGNDILRTLFAECTAAGTLRGIVQLAEGADAPTDLRELGEAALLAITIENP ECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEEECCC GLDPREPQRYQSLVGMQAPDLAEAFETYFQQSEQLPTRLLLAAGPDQAAGLLLQKLPGDE CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCC GDTDGWTRIGALFDTLGAPELLSVAGQDLLHRLFHEEEPQLLGSKPLSFGCSCSRERVAS CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHH MLQSLGEEEARAAAEATGEVEVRCEFCGREYHFPLTALDVLFNAAQPSQEAPERLQ HHHHHCHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA