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The map label for this gene is ybiX [C]

Identifier: 21243669

GI number: 21243669

Start: 3447833

End: 3448519

Strand: Direct

Name: ybiX [C]

Synonym: XAC2942

Alternate gene names: 21243669

Gene position: 3447833-3448519 (Clockwise)

Preceding gene: 21243668

Following gene: 21243670

Centisome position: 66.62

GC content: 65.65

Gene sequence:

>687_bases
ATGTTGTTGCCCATCCCCGATGTGCTCAGCCCCGCGCAACTCAGCCAGCTACGCGCGCAGCTGGACGTGGCCGACTGGGC
AGACGGTCGCATCACCGCCGGTCACCAGTCGGCACAGGCCAAGGACAACGCGCAGTTGCCCGAAGACAGCGCCGTTGCAC
GCGAGGCCGGTGCGCTGGTGCTGGAGGCACTCGCACGCAGCAGCACGTTCTTTTCGGCAGTGTTGCCGCGCAGGATCTAT
CCGCCACTGTTCAATCGCTACAGCGGCGGGCAGTCGTTCGGCTATCACGTGGACAACGCGGTGCGGTACGACCGCAGTCG
TGGCGGCGCCGAAGCGGTGCGCACCGATGTCTCCGCCACGCTGTTTCTCAGCGACCCGGACAGCTACGACGGTGGCGAGC
TGGTCATCGAAGACACCTACGGCACGCAGTCGGTCAAGCTGCCGGCCGGGCATCTGGTGATCTATCCGGGCACGAGTCTG
CACAGGGTCATGCCGGTCACACGTGGCGCGCGCGTGGCGTGCTTTTTCTGGGCACAAAGCATGCTGCGCGACGCTGCGCA
GCGCCGCCTGTTGTTCGAGCTGGATGTCTCGATCCGCCGCCTCACCCAGGACACGCCCGGGCATCCCTCATTGATCCAGC
TCACCGGCGTGTATCACAACCTGCTGCGGCAATGGGCCGATGTCTGA

Upstream 100 bases:

>100_bases
GTTGCCGGGTGACGGCCGCTCGGCAGTGTTGAACGCCACCTTCAGCTTCTAACCCTCAGGCACGCCGTGCGCGCTGCGCG
GGCGACGTGGAGACCACTGC

Downstream 100 bases:

>100_bases
GCCGGCGCTGGACATCGCGCAGCTGAGCGCGTTGCTGCGCACGCAGCCGGAACAGGCACGTGCGCGCTTGCACAAAGCCG
CTGCGAACCATGACGTAGGC

Product: hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MLLPIPDVLSPAQLSQLRAQLDVADWADGRITAGHQSAQAKDNAQLPEDSAVAREAGALVLEALARSSTFFSAVLPRRIY
PPLFNRYSGGQSFGYHVDNAVRYDRSRGGAEAVRTDVSATLFLSDPDSYDGGELVIEDTYGTQSVKLPAGHLVIYPGTSL
HRVMPVTRGARVACFFWAQSMLRDAAQRRLLFELDVSIRRLTQDTPGHPSLIQLTGVYHNLLRQWADV

Sequences:

>Translated_228_residues
MLLPIPDVLSPAQLSQLRAQLDVADWADGRITAGHQSAQAKDNAQLPEDSAVAREAGALVLEALARSSTFFSAVLPRRIY
PPLFNRYSGGQSFGYHVDNAVRYDRSRGGAEAVRTDVSATLFLSDPDSYDGGELVIEDTYGTQSVKLPAGHLVIYPGTSL
HRVMPVTRGARVACFFWAQSMLRDAAQRRLLFELDVSIRRLTQDTPGHPSLIQLTGVYHNLLRQWADV
>Mature_228_residues
MLLPIPDVLSPAQLSQLRAQLDVADWADGRITAGHQSAQAKDNAQLPEDSAVAREAGALVLEALARSSTFFSAVLPRRIY
PPLFNRYSGGQSFGYHVDNAVRYDRSRGGAEAVRTDVSATLFLSDPDSYDGGELVIEDTYGTQSVKLPAGHLVIYPGTSL
HRVMPVTRGARVACFFWAQSMLRDAAQRRLLFELDVSIRRLTQDTPGHPSLIQLTGVYHNLLRQWADV

Specific function: Unknown

COG id: COG3128

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe2OG dioxygenase domain [H]

Homologues:

Organism=Escherichia coli, GI87081784, Length=228, Percent_Identity=50.4385964912281, Blast_Score=236, Evalue=9e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005123
- InterPro:   IPR006620 [H]

Pfam domain/function: PF03171 2OG-FeII_Oxy [H]

EC number: 1.14.11.- [C]

Molecular weight: Translated: 25077; Mature: 25077

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLPIPDVLSPAQLSQLRAQLDVADWADGRITAGHQSAQAKDNAQLPEDSAVAREAGALV
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
LEALARSSTFFSAVLPRRIYPPLFNRYSGGQSFGYHVDNAVRYDRSRGGAEAVRTDVSAT
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCHHHHHHCCCCCHHHHHHCCEEE
LFLSDPDSYDGGELVIEDTYGTQSVKLPAGHLVIYPGTSLHRVMPVTRGARVACFFWAQS
EEEECCCCCCCCEEEEEECCCCCEEECCCCCEEEECCCCCHHHCCCCCCCEEHHHHHHHH
MLRDAAQRRLLFELDVSIRRLTQDTPGHPSLIQLTGVYHNLLRQWADV
HHHHHHHHHEEHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLPIPDVLSPAQLSQLRAQLDVADWADGRITAGHQSAQAKDNAQLPEDSAVAREAGALV
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
LEALARSSTFFSAVLPRRIYPPLFNRYSGGQSFGYHVDNAVRYDRSRGGAEAVRTDVSAT
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCHHHHHHCCCCCHHHHHHCCEEE
LFLSDPDSYDGGELVIEDTYGTQSVKLPAGHLVIYPGTSLHRVMPVTRGARVACFFWAQS
EEEECCCCCCCCEEEEEECCCCCEEECCCCCEEEECCCCCHHHCCCCCCCEEHHHHHHHH
MLRDAAQRRLLFELDVSIRRLTQDTPGHPSLIQLTGVYHNLLRQWADV
HHHHHHHHHEEHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA