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The map label for this gene is ybeQ [H]

Identifier: 21243670

GI number: 21243670

Start: 3448512

End: 3449270

Strand: Direct

Name: ybeQ [H]

Synonym: XAC2943

Alternate gene names: 21243670

Gene position: 3448512-3449270 (Clockwise)

Preceding gene: 21243669

Following gene: 21243671

Centisome position: 66.63

GC content: 68.91

Gene sequence:

>759_bases
ATGTCTGAGCCGGCGCTGGACATCGCGCAGCTGAGCGCGTTGCTGCGCACGCAGCCGGAACAGGCACGTGCGCGCTTGCA
CAAAGCCGCTGCGAACCATGACGTAGGCGCACAATTGCTGCTCGCGCAGATGTACGCCGAAGGACGCGGCATTGCCGCAG
ATCCGGCTGCAGCGATGCTGTGGTACGAAGTGGCCGCCAACGCAGGGTGTGCGGAGGCGATGAACCAGCTGGGCCGCTGC
CATGAGCTCGGGTTCGGCACCGCCATCAACGCGGTGCTGGCCGTGCTGTGGTATCGCCGCGCCGCCGAACATGGCCTGGC
ATGGGGCATGTACAACCTGGCGCACATGTACGCCTCCGGGCGCGGCGTGGCGCAGGACCACGCGCAGGCATTGGCGCTGT
ACCACCGCGCGGCCGAAGCCGGACATGCCAAGTCGATGAACTTCCTGGCGCGCTATCTCGACCAGGGCCTGGCCTGCGCT
GCAGACCCTCTGGCCGCATGCGTGTGGTACCGCCGCTCCGCCGAAGCGGGCGATTTCCGCGGCCAGGCCGGCTACGCCAC
CCTACTTGCCGACAGCGGCGAGCTGGATCAGGCCGAGACATGGATGCGCCGCGCCATCGCAGGTGGCCACGCCGGCTTTT
TGCAACAGCTCGCACCACTGCTGGCCGGCGCGCGCCATCCGCGCCTGCGCGCCTTGCTGCACGAGGTGGCTGCACGGCAG
CGGCAACTGCAGCCTTGCGTCCCCGCAGACGTGGCCTGA

Upstream 100 bases:

>100_bases
CTGGATGTCTCGATCCGCCGCCTCACCCAGGACACGCCCGGGCATCCCTCATTGATCCAGCTCACCGGCGTGTATCACAA
CCTGCTGCGGCAATGGGCCG

Downstream 100 bases:

>100_bases
GCGCAGCATGTCGACCACAGACCACGCTCACCTCGCCAGCGCGCAGCAACGCCGCGGCTTCTGGCTGCGCATGCTGCATC
AGTGGCACTGGATCAGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSEPALDIAQLSALLRTQPEQARARLHKAAANHDVGAQLLLAQMYAEGRGIAADPAAAMLWYEVAANAGCAEAMNQLGRC
HELGFGTAINAVLAVLWYRRAAEHGLAWGMYNLAHMYASGRGVAQDHAQALALYHRAAEAGHAKSMNFLARYLDQGLACA
ADPLAACVWYRRSAEAGDFRGQAGYATLLADSGELDQAETWMRRAIAGGHAGFLQQLAPLLAGARHPRLRALLHEVAARQ
RQLQPCVPADVA

Sequences:

>Translated_252_residues
MSEPALDIAQLSALLRTQPEQARARLHKAAANHDVGAQLLLAQMYAEGRGIAADPAAAMLWYEVAANAGCAEAMNQLGRC
HELGFGTAINAVLAVLWYRRAAEHGLAWGMYNLAHMYASGRGVAQDHAQALALYHRAAEAGHAKSMNFLARYLDQGLACA
ADPLAACVWYRRSAEAGDFRGQAGYATLLADSGELDQAETWMRRAIAGGHAGFLQQLAPLLAGARHPRLRALLHEVAARQ
RQLQPCVPADVA
>Mature_251_residues
SEPALDIAQLSALLRTQPEQARARLHKAAANHDVGAQLLLAQMYAEGRGIAADPAAAMLWYEVAANAGCAEAMNQLGRCH
ELGFGTAINAVLAVLWYRRAAEHGLAWGMYNLAHMYASGRGVAQDHAQALALYHRAAEAGHAKSMNFLARYLDQGLACAA
DPLAACVWYRRSAEAGDFRGQAGYATLLADSGELDQAETWMRRAIAGGHAGFLQQLAPLLAGARHPRLRALLHEVAARQR
QLQPCVPADVA

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Escherichia coli, GI87081769, Length=205, Percent_Identity=34.6341463414634, Blast_Score=88, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 27028; Mature: 26897

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPALDIAQLSALLRTQPEQARARLHKAAANHDVGAQLLLAQMYAEGRGIAADPAAAML
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH
WYEVAANAGCAEAMNQLGRCHELGFGTAINAVLAVLWYRRAAEHGLAWGMYNLAHMYASG
HHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
RGVAQDHAQALALYHRAAEAGHAKSMNFLARYLDQGLACAADPLAACVWYRRSAEAGDFR
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
GQAGYATLLADSGELDQAETWMRRAIAGGHAGFLQQLAPLLAGARHPRLRALLHEVAARQ
CCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RQLQPCVPADVA
HHCCCCCCCCCC
>Mature Secondary Structure 
SEPALDIAQLSALLRTQPEQARARLHKAAANHDVGAQLLLAQMYAEGRGIAADPAAAML
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH
WYEVAANAGCAEAMNQLGRCHELGFGTAINAVLAVLWYRRAAEHGLAWGMYNLAHMYASG
HHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
RGVAQDHAQALALYHRAAEAGHAKSMNFLARYLDQGLACAADPLAACVWYRRSAEAGDFR
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
GQAGYATLLADSGELDQAETWMRRAIAGGHAGFLQQLAPLLAGARHPRLRALLHEVAARQ
CCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RQLQPCVPADVA
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]