| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yjiW [C]
Identifier: 21243590
GI number: 21243590
Start: 3359265
End: 3359618
Strand: Reverse
Name: yjiW [C]
Synonym: XAC2863
Alternate gene names: 21243590
Gene position: 3359618-3359265 (Counterclockwise)
Preceding gene: 21243598
Following gene: 21243589
Centisome position: 64.91
GC content: 63.56
Gene sequence:
>354_bases ATGCGTCAACCGCCGTCCCGCCCCAACAATGCGCGCAAGCGTGTACGGCATCAGCCCAAGCGCGACGCGGTGTGGCGCGT CGTGGAATCATCGCCTCCTCCCATGCTCACAGTCGACGAAGTAGCGGCCGCGAATGCCGCCGATCTTGCACGTCAGCAAC GGGCCAGACGTCGCCCGCGTCCACCGCAGCAGTGCACCATTGGCTATGGCTACTATGCCGCCACCCAGCAATACGTGCCG ACGGTGCGCCTGCGCGGCCGCTGGCTGGAGCAACTGGGCTTTGTCGTTGGCAGTAAGCTGGATATCCGCATGCGCGAGGG TGAACTGGTGATGAGCTTGGCCCATAAAGACTAA
Upstream 100 bases:
>100_bases CCTTTGGGGAAATACGCCCGCCGACTGTTCGCGGTTTCTAACCTCCCGACATCCCGTCGCCATTTGGCGGCGGGTCGATG CCCTTCGAGGAGGATTTGTC
Downstream 100 bases:
>100_bases GCGGCTTGCGAGCTATTGGCACTCCCCGCCATCTCAAGCGAACCACTTTGCTACGCTTGATCGATAAGCATCTTGGAGAA ACAAGTGTCTACTCAGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MRQPPSRPNNARKRVRHQPKRDAVWRVVESSPPPMLTVDEVAAANAADLARQQRARRRPRPPQQCTIGYGYYAATQQYVP TVRLRGRWLEQLGFVVGSKLDIRMREGELVMSLAHKD
Sequences:
>Translated_117_residues MRQPPSRPNNARKRVRHQPKRDAVWRVVESSPPPMLTVDEVAAANAADLARQQRARRRPRPPQQCTIGYGYYAATQQYVP TVRLRGRWLEQLGFVVGSKLDIRMREGELVMSLAHKD >Mature_117_residues MRQPPSRPNNARKRVRHQPKRDAVWRVVESSPPPMLTVDEVAAANAADLARQQRARRRPRPPQQCTIGYGYYAATQQYVP TVRLRGRWLEQLGFVVGSKLDIRMREGELVMSLAHKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13459; Mature: 13459
Theoretical pI: Translated: 11.71; Mature: 11.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQPPSRPNNARKRVRHQPKRDAVWRVVESSPPPMLTVDEVAAANAADLARQQRARRRPR CCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCEEEHHHHHHCCHHHHHHHHHHHCCCC PPQQCTIGYGYYAATQQYVPTVRLRGRWLEQLGFVVGSKLDIRMREGELVMSLAHKD CCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCC >Mature Secondary Structure MRQPPSRPNNARKRVRHQPKRDAVWRVVESSPPPMLTVDEVAAANAADLARQQRARRRPR CCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCEEEHHHHHHCCHHHHHHHHHHHCCCC PPQQCTIGYGYYAATQQYVPTVRLRGRWLEQLGFVVGSKLDIRMREGELVMSLAHKD CCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA