| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243589
Identifier: 21243589
GI number: 21243589
Start: 3358551
End: 3359192
Strand: Reverse
Name: 21243589
Synonym: XAC2862
Alternate gene names: NA
Gene position: 3359192-3358551 (Counterclockwise)
Preceding gene: 21243590
Following gene: 21243588
Centisome position: 64.9
GC content: 56.7
Gene sequence:
>642_bases TTGGAGAAACAAGTGTCTACTCAGAATGCACCCAGGAAAGGCGAGTTCTATATTCTCAGACCCGACATGCGTGGCGGCGG GCGCGGACCTGGGGTGAAGCTTGAGAATGAGGATGCGGTGCCGTTTTCCATTGCCTACAGCCTGCCGGGGGAAGACGCGG GGCTGGCCGCATTGAAGGAGCCCCCGCGCGTGCGCTACGACAGCCACATAGGCGATATGCCTAATGATCTTGAGAGTGGT TTGAAGGACTACTGGCTGGTCTCCGAACCGCTAAAACAGCTACTCGAAGCTGCGGACCCGGAAGGATTTGCCTTCGCGCT ATGCGACTTCCGATTGGAAGACGGTACGCCCGCGGCACCGCACTATCTTTGTGAGGTGGTGCGGATTATCGACGCCATCG ACGAGGAGGCGTCCACCATCAAGGTGTTGGCCGGACATCGGAATGGCAAGTATTACAGTCTTAGGGGCGGTGCCGAGTTG GCATTCAAGAAAGAGGTAATCGGGGCTGCACACGTCTTCCGAACGCCTTATACGGCAGACGCTTTTTGCGACCGATTTTT ACGCGATACCTTGATCGAGTACGGATTCGGAAAATCCCCAAGGACGCGCGGCGTTCGAGTGATAGATGCGGCAGACTACT GA
Upstream 100 bases:
>100_bases GGTGATGAGCTTGGCCCATAAAGACTAAGCGGCTTGCGAGCTATTGGCACTCCCCGCCATCTCAAGCGAACCACTTTGCT ACGCTTGATCGATAAGCATC
Downstream 100 bases:
>100_bases TCTGATCTCTTTTTTGACTGCATGGAGCCGAGGCATATGCCGACCAGCAATGTCATTCTTCAAAGTCACCACGTCATTGA AAACAGTACTTTTCTCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MEKQVSTQNAPRKGEFYILRPDMRGGGRGPGVKLENEDAVPFSIAYSLPGEDAGLAALKEPPRVRYDSHIGDMPNDLESG LKDYWLVSEPLKQLLEAADPEGFAFALCDFRLEDGTPAAPHYLCEVVRIIDAIDEEASTIKVLAGHRNGKYYSLRGGAEL AFKKEVIGAAHVFRTPYTADAFCDRFLRDTLIEYGFGKSPRTRGVRVIDAADY
Sequences:
>Translated_213_residues MEKQVSTQNAPRKGEFYILRPDMRGGGRGPGVKLENEDAVPFSIAYSLPGEDAGLAALKEPPRVRYDSHIGDMPNDLESG LKDYWLVSEPLKQLLEAADPEGFAFALCDFRLEDGTPAAPHYLCEVVRIIDAIDEEASTIKVLAGHRNGKYYSLRGGAEL AFKKEVIGAAHVFRTPYTADAFCDRFLRDTLIEYGFGKSPRTRGVRVIDAADY >Mature_213_residues MEKQVSTQNAPRKGEFYILRPDMRGGGRGPGVKLENEDAVPFSIAYSLPGEDAGLAALKEPPRVRYDSHIGDMPNDLESG LKDYWLVSEPLKQLLEAADPEGFAFALCDFRLEDGTPAAPHYLCEVVRIIDAIDEEASTIKVLAGHRNGKYYSLRGGAEL AFKKEVIGAAHVFRTPYTADAFCDRFLRDTLIEYGFGKSPRTRGVRVIDAADY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23559; Mature: 23559
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKQVSTQNAPRKGEFYILRPDMRGGGRGPGVKLENEDAVPFSIAYSLPGEDAGLAALKE CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCHHHCC PPRVRYDSHIGDMPNDLESGLKDYWLVSEPLKQLLEAADPEGFAFALCDFRLEDGTPAAP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCH HYLCEVVRIIDAIDEEASTIKVLAGHRNGKYYSLRGGAELAFKKEVIGAAHVFRTPYTAD HHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHH AFCDRFLRDTLIEYGFGKSPRTRGVRVIDAADY HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC >Mature Secondary Structure MEKQVSTQNAPRKGEFYILRPDMRGGGRGPGVKLENEDAVPFSIAYSLPGEDAGLAALKE CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCHHHCC PPRVRYDSHIGDMPNDLESGLKDYWLVSEPLKQLLEAADPEGFAFALCDFRLEDGTPAAP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCH HYLCEVVRIIDAIDEEASTIKVLAGHRNGKYYSLRGGAELAFKKEVIGAAHVFRTPYTAD HHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHH AFCDRFLRDTLIEYGFGKSPRTRGVRVIDAADY HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA