| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is cls [H]
Identifier: 21243598
GI number: 21243598
Start: 3369092
End: 3370654
Strand: Reverse
Name: cls [H]
Synonym: XAC2871
Alternate gene names: 21243598
Gene position: 3370654-3369092 (Counterclockwise)
Preceding gene: 21243599
Following gene: 21243590
Centisome position: 65.13
GC content: 64.68
Gene sequence:
>1563_bases GTGACAAAGCGGAAATTTTTCAAATGGTTCGGCATTGCGCTGCTGGTGCTGGTGCTGGCCAGCGCGTTATCGCTGTACGG CTACGGGCGCTTTGCCGACCGCCAACGCGGGCCGGTCAGTCATGTGCTGCCTGCCACGGCGGTCGCGACGCCCATCGACA AGGTGGTGGCGCCATTGCAACAGGCGCATGCCGATCAGACCGGCATGGTGATCCTGCCGGACAACGTCGATGCATTTGCG GTACGTGCGCTCACCGCGCGTGCGGCCGGGCGCAGCCTGGATCTGCAGTACTACATCTGGCACGCCGATTTCACCGGCAA CCTGCTGCACAACGAGTTGCTGCGCGCGGCCGATCGCGGCGTACGCGTGCGATTGCTGCTGGACGACATGAATATCCATG GCAGCGATTCGGTGCTGGCCGCCCTGGATAGCCATCCGCTGATCGAGATTCGCCTGTTCAACCCGACCCGCGCGCGCGAA GGCACCTTGATGCGCGGCGTGGAGATGGTGCTGCGCATGTTCAGCATCAACCGCCGCATGCACAACAAGGCCTGGATTGC CGATGGCCGCATCGCGGTGGTGGGTGGGCGCAACGTGGGCGACGAATATTTCGATGCGGCGCGCGACACCAATTTCATGG ATATGGATGCGGCGCTGATGGGGCCGGCGGTGGGCCAGGCCGAGCAGGTATTCGATGCGTACTGGAATAGCCCCAATGCC TTGCCGCTGTCTGCGCTGGTCACCGCAAAACCGCAGGCACTGGAGGCCTTGCGTGGCAGCCTGGACGCCGGCATGGCATC GGTGCGCGCGCATCCGTATGTGGAGCGGCTCAAGCGCTCCCCAAGCGTGCGCGAACTGATGCAGGGCGACCGCCCGGTGC ACTGGGTGTCGCAGGCGCGCATCGTTTCCGACCCGCCGGAAAAAGCCGAAGGTGCGCCGCCGCAAGCCGATTGGATGACG CCAGTGCTGATCGGCGAAATGGCGCACGCACAGCGCGAACTGAAAGTGATTTCGCCGTATTTCGTGCCGGGCGACGAGGG CATGCGCTGGATCGGCCATCTGCGCCAGCGCAACGTGCGCGTGAGCATTCTGACCAATTCGCTGGCAGCCAACGACGTGG TGGCAGTGCACAGCGGCTACGCCGGCTATCGCGTGCCGCTTCTGCAGCTGGGCGTGCGCCTGCATGAGCTCAAGCCGATG GGCAAGCCGGACGGCAGCCTGTTCGGTTCCAGCGGTGCCAGCTTGCATACCAAGGCGTTTGTCGTGGACGACAGCAGCGG TTTCATCGGCTCGTTCAACCTGGACCCGCGTTCGATGAACCTCAATACCGAAATGGGCCTGTTGTTCAACGACCGTGTGG TCACCGCGGAGCTGGAGCGGCTGTACAACCACAAGGTCAGTGCGCCAGTGAGTTACCGCGTCACCCTGGACCGGGGCGAA CTGCGTTGGCACGACGATGCCGCGCAGCCGCCCGAGGTGTGGTCGCGCGAGCCGGCCGCGAGCGTGTGGCGACGTGGTGC AGCAGCGGTGATGGGCTGGTTGCCGCTGGAGTCGCAGCTGTAG
Upstream 100 bases:
>100_bases GGTGCTTGTGGGAATTGTCGAGGTTGCTTGTGGCGGCGTCTGCACACCGGTCTGCCCGCGTGGGCTCTACACTGCCGCGC TGCGCATCGCGGAATCGGCA
Downstream 100 bases:
>100_bases GTCTGCTCAGGGTGTTGCCCTCATCCGCCCTTCGGGCACCTTCTCCCGCGGGCGGGAGAAGGGAATGTGGCGGTCTTTCA TGGACGGGAGAAATGCGCGT
Product: cardiolipin synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MTKRKFFKWFGIALLVLVLASALSLYGYGRFADRQRGPVSHVLPATAVATPIDKVVAPLQQAHADQTGMVILPDNVDAFA VRALTARAAGRSLDLQYYIWHADFTGNLLHNELLRAADRGVRVRLLLDDMNIHGSDSVLAALDSHPLIEIRLFNPTRARE GTLMRGVEMVLRMFSINRRMHNKAWIADGRIAVVGGRNVGDEYFDAARDTNFMDMDAALMGPAVGQAEQVFDAYWNSPNA LPLSALVTAKPQALEALRGSLDAGMASVRAHPYVERLKRSPSVRELMQGDRPVHWVSQARIVSDPPEKAEGAPPQADWMT PVLIGEMAHAQRELKVISPYFVPGDEGMRWIGHLRQRNVRVSILTNSLAANDVVAVHSGYAGYRVPLLQLGVRLHELKPM GKPDGSLFGSSGASLHTKAFVVDDSSGFIGSFNLDPRSMNLNTEMGLLFNDRVVTAELERLYNHKVSAPVSYRVTLDRGE LRWHDDAAQPPEVWSREPAASVWRRGAAAVMGWLPLESQL
Sequences:
>Translated_520_residues MTKRKFFKWFGIALLVLVLASALSLYGYGRFADRQRGPVSHVLPATAVATPIDKVVAPLQQAHADQTGMVILPDNVDAFA VRALTARAAGRSLDLQYYIWHADFTGNLLHNELLRAADRGVRVRLLLDDMNIHGSDSVLAALDSHPLIEIRLFNPTRARE GTLMRGVEMVLRMFSINRRMHNKAWIADGRIAVVGGRNVGDEYFDAARDTNFMDMDAALMGPAVGQAEQVFDAYWNSPNA LPLSALVTAKPQALEALRGSLDAGMASVRAHPYVERLKRSPSVRELMQGDRPVHWVSQARIVSDPPEKAEGAPPQADWMT PVLIGEMAHAQRELKVISPYFVPGDEGMRWIGHLRQRNVRVSILTNSLAANDVVAVHSGYAGYRVPLLQLGVRLHELKPM GKPDGSLFGSSGASLHTKAFVVDDSSGFIGSFNLDPRSMNLNTEMGLLFNDRVVTAELERLYNHKVSAPVSYRVTLDRGE LRWHDDAAQPPEVWSREPAASVWRRGAAAVMGWLPLESQL >Mature_519_residues TKRKFFKWFGIALLVLVLASALSLYGYGRFADRQRGPVSHVLPATAVATPIDKVVAPLQQAHADQTGMVILPDNVDAFAV RALTARAAGRSLDLQYYIWHADFTGNLLHNELLRAADRGVRVRLLLDDMNIHGSDSVLAALDSHPLIEIRLFNPTRAREG TLMRGVEMVLRMFSINRRMHNKAWIADGRIAVVGGRNVGDEYFDAARDTNFMDMDAALMGPAVGQAEQVFDAYWNSPNAL PLSALVTAKPQALEALRGSLDAGMASVRAHPYVERLKRSPSVRELMQGDRPVHWVSQARIVSDPPEKAEGAPPQADWMTP VLIGEMAHAQRELKVISPYFVPGDEGMRWIGHLRQRNVRVSILTNSLAANDVVAVHSGYAGYRVPLLQLGVRLHELKPMG KPDGSLFGSSGASLHTKAFVVDDSSGFIGSFNLDPRSMNLNTEMGLLFNDRVVTAELERLYNHKVSAPVSYRVTLDRGEL RWHDDAAQPPEVWSREPAASVWRRGAAAVMGWLPLESQL
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI87081826, Length=469, Percent_Identity=40.0852878464819, Blast_Score=316, Evalue=2e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001736 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57438; Mature: 57306
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRKFFKWFGIALLVLVLASALSLYGYGRFADRQRGPVSHVLPATAVATPIDKVVAPLQ CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHCCHHHHHHHHH QAHADQTGMVILPDNVDAFAVRALTARAAGRSLDLQYYIWHADFTGNLLHNELLRAADRG HHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCC VRVRLLLDDMNIHGSDSVLAALDSHPLIEIRLFNPTRAREGTLMRGVEMVLRMFSINRRM CEEEEEEECCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH HNKAWIADGRIAVVGGRNVGDEYFDAARDTNFMDMDAALMGPAVGQAEQVFDAYWNSPNA CCCEEEECCEEEEEECCCCCHHHHHHHCCCCCEECCHHHHCCCCCHHHHHHHHHCCCCCC LPLSALVTAKPQALEALRGSLDAGMASVRAHPYVERLKRSPSVRELMQGDRPVHWVSQAR CCCHHEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCCEEEHHCCE IVSDPPEKAEGAPPQADWMTPVLIGEMAHAQRELKVISPYFVPGDEGMRWIGHLRQRNVR ECCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCEECCCCCHHHHHHHHHHCCEE VSILTNSLAANDVVAVHSGYAGYRVPLLQLGVRLHELKPMGKPDGSLFGSSGASLHTKAF EEEEECCCCCCCEEEEECCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCEEEEEE VVDDSSGFIGSFNLDPRSMNLNTEMGLLFNDRVVTAELERLYNHKVSAPVSYRVTLDRGE EEECCCCCEEEECCCCCCCCCCCCCCEEECCEEHHHHHHHHHCCCCCCCEEEEEEEECCC LRWHDDAAQPPEVWSREPAASVWRRGAAAVMGWLPLESQL EEECCCCCCCCHHHCCCHHHHHHHCCHHHHHEECCCCCCC >Mature Secondary Structure TKRKFFKWFGIALLVLVLASALSLYGYGRFADRQRGPVSHVLPATAVATPIDKVVAPLQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHCCHHHHHHHHH QAHADQTGMVILPDNVDAFAVRALTARAAGRSLDLQYYIWHADFTGNLLHNELLRAADRG HHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCC VRVRLLLDDMNIHGSDSVLAALDSHPLIEIRLFNPTRAREGTLMRGVEMVLRMFSINRRM CEEEEEEECCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH HNKAWIADGRIAVVGGRNVGDEYFDAARDTNFMDMDAALMGPAVGQAEQVFDAYWNSPNA CCCEEEECCEEEEEECCCCCHHHHHHHCCCCCEECCHHHHCCCCCHHHHHHHHHCCCCCC LPLSALVTAKPQALEALRGSLDAGMASVRAHPYVERLKRSPSVRELMQGDRPVHWVSQAR CCCHHEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCCEEEHHCCE IVSDPPEKAEGAPPQADWMTPVLIGEMAHAQRELKVISPYFVPGDEGMRWIGHLRQRNVR ECCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCEECCCCCHHHHHHHHHHCCEE VSILTNSLAANDVVAVHSGYAGYRVPLLQLGVRLHELKPMGKPDGSLFGSSGASLHTKAF EEEEECCCCCCCEEEEECCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCCEEEEEE VVDDSSGFIGSFNLDPRSMNLNTEMGLLFNDRVVTAELERLYNHKVSAPVSYRVTLDRGE EEECCCCCEEEECCCCCCCCCCCCCCEEECCEEHHHHHHHHHCCCCCCCEEEEEEEECCC LRWHDDAAQPPEVWSREPAASVWRRGAAAVMGWLPLESQL EEECCCCCCCCHHHCCCHHHHHHHCCHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]