| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243567
Identifier: 21243567
GI number: 21243567
Start: 3330116
End: 3330508
Strand: Reverse
Name: 21243567
Synonym: XAC2840
Alternate gene names: NA
Gene position: 3330508-3330116 (Counterclockwise)
Preceding gene: 21243568
Following gene: 21243564
Centisome position: 64.35
GC content: 70.23
Gene sequence:
>393_bases GTGAGCAGGGCGGGCGGTGCGCCATCGGTCGTGGGGTCGGCCGAGTATTTCACCGGCAAGGTGCGCATCGACGCACCGTT CCAGGCCGACGCGCCGGCACGCGTCGGCGGCGCCACCGTCACCTTCGAGCCGGGCGCACGCACCGCATGGCATACCCATC CGCTGGGCCAGACGCTGATCGTCACAGCCGGCGCCGGGCGCGTGCAGGAGTGGGGCAAGCCGGCGCAGCAGATCCGCCCG GGCGATATCGTGTGGATTCCGCCCGGCGTCAAGCATTGGCACGGCGCCAATGCCAACGTGGCGATGACGCATATCGCCGT CGCCGAATCGCAGGACGGTGCGCCCGTCACCTGGTTGGAGCAGGTGAGCGAGGCGCAGTATGCAGCGGAGTAG
Upstream 100 bases:
>100_bases CTAAAAATGAAGGAGCGCTGCAATGAATCTGTTCGCGACCGCGATATCTGTCTCCATGATGGCCGCCGTGACACCGGATG AGGCTGCGCAGCGGATCAGG
Downstream 100 bases:
>100_bases ACAGCTGCGATGCCGATGCCGATGCTGGCGCGGCGATGGTGCCGTCTCAGCGCGAGCGAACGCGGCGGCGGATTGCAGGG GCCGCTGTGCGGCCCGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Carboxymuconolactone Decarboxylase; Transcriptional Regulator; Cupin 2 Conserved Barrel Domain-Containing Protein; 4-Carboxymuconolactone Decarboxylase; Cupin 2 Barrel; Cupin Domain-Containing Protein; Cupin Family Protein; Cupin Region; Carboxymuconolactone Decarboxylase Family Protein; Double-Stranded Beta-Helix-Like Protein; Cupin Domain Protein; Cupin 2 Barrel Domain-Containing Protein; RmlC-Type Cupin; Exported RmlC-Type Cupin; Conserved Protein; ABC-2 Type Transporter; Double-Stranded Beta-Helix Protein; Secreted Protein
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSRAGGAPSVVGSAEYFTGKVRIDAPFQADAPARVGGATVTFEPGARTAWHTHPLGQTLIVTAGAGRVQEWGKPAQQIRP GDIVWIPPGVKHWHGANANVAMTHIAVAESQDGAPVTWLEQVSEAQYAAE
Sequences:
>Translated_130_residues MSRAGGAPSVVGSAEYFTGKVRIDAPFQADAPARVGGATVTFEPGARTAWHTHPLGQTLIVTAGAGRVQEWGKPAQQIRP GDIVWIPPGVKHWHGANANVAMTHIAVAESQDGAPVTWLEQVSEAQYAAE >Mature_129_residues SRAGGAPSVVGSAEYFTGKVRIDAPFQADAPARVGGATVTFEPGARTAWHTHPLGQTLIVTAGAGRVQEWGKPAQQIRPG DIVWIPPGVKHWHGANANVAMTHIAVAESQDGAPVTWLEQVSEAQYAAE
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13647; Mature: 13516
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAGGAPSVVGSAEYFTGKVRIDAPFQADAPARVGGATVTFEPGARTAWHTHPLGQTLI CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCEEE VTAGAGRVQEWGKPAQQIRPGDIVWIPPGVKHWHGANANVAMTHIAVAESQDGAPVTWLE EEECCCCCHHHCCCHHHCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHH QVSEAQYAAE HHHHHHHCCC >Mature Secondary Structure SRAGGAPSVVGSAEYFTGKVRIDAPFQADAPARVGGATVTFEPGARTAWHTHPLGQTLI CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCEEE VTAGAGRVQEWGKPAQQIRPGDIVWIPPGVKHWHGANANVAMTHIAVAESQDGAPVTWLE EEECCCCCHHHCCCHHHCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHH QVSEAQYAAE HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA