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The map label for this gene is araJ [H]

Identifier: 21243564

GI number: 21243564

Start: 3326328

End: 3327329

Strand: Reverse

Name: araJ [H]

Synonym: XAC2837

Alternate gene names: 21243564

Gene position: 3327329-3326328 (Counterclockwise)

Preceding gene: 21243567

Following gene: 21243563

Centisome position: 64.29

GC content: 69.96

Gene sequence:

>1002_bases
ATGTCCAACCTCACCTCTGCGCGTTCATCGCGCTTTCCGCCGGCGTTGCTGGCACTGACCATCGGTGCCTTCGGCATTGG
CACGACCGAGTTCGTGATCATGGGGCTGCTGCAGCAGGTAGCCGCGGATCTGGGCGTTTCGCTCAGCGCGGCGGGCCTGT
TGATCAGCGGTTATGCGCTGGGTGTGTTCGTCGGTGCGCCGGTGCTGACCCTGGCCAGCGCACGCCTGCCGCGCAAGGCG
GTGCTGGTCGGTCTGATGCTGATCTTCACGGTCGGCAACGTGGCCTGCGCGCTGGCGCCGGACTACACCAGCCTGATGGT
TGCGCGGGTGCTGACGTCGCTGGCCCACGGCACGTTTTTCGGCGTCGGCGCCGTCGTGGCGACGTCGCTGGTGCCGGCCG
AACGCCGTGCATCGGCCATCTCGCTGATGTTCGCCGGGCTGACCGTGGCCACCTTGCTCGGGGTGCCGGCCGGTGCCTGG
CTGGGGCTGCAACTGGGTTGGCGCGCGACCTTCTGGGCGGTGGCTGCGATCGGTGTGCTGGCCACTTCCGCGGTCGCGGT
GTGGGTGCCGGCCGCGGCAGGTGCTGCCACGCCGGTGTCGTGGCGGCAGGAAGTGGCGGTATTGCAGCGGGGGCAGGTGC
TGCTGGCGCTGGCGATCACCGTGGTGGGCTACGCCGGTGTGTTCGCCGTGTTCGCCTACATCCAGCCGCTGCTGCTGCAG
GTCACCGGCTTTGCGCAATCGACGGTGTCGCCGGTGCTGCTGGTGTTCGGCGTGGGCATGATCGTCGGCAATCTGCTCGG
TGGGCGGCTGGCGGACCGTCGCCCCACCGCGGCCCTGCTGGGCAGCCTGGCGGCCCTGGTGGTCGTGCTGGGCGCACTGG
GATGCGTCCTGCACAGCAAGGCCGCCATGGTGACCTTTGTCGGGCTACTGGGCGTGGCTGCCTTCGCCACCGTGGCGCCA
CTGCAGTTGCGCGTGCTGGAACACGCGCGCGGCGCCGGCTAG

Upstream 100 bases:

>100_bases
TCCGATTCTCAATGATTGATTGAAAGTGAATCAGCATAGCAGGGGTTTTTGAAAGTAAACGCGGGGCGCAGGCTGTGCGC
AGTCCTCCCTGGCCCTGCCC

Downstream 100 bases:

>100_bases
AACCTGGCCTCCAGCCTCAATATCGCCGCCTTCAACCTGGGCAATGCGCTGGGCGCATGGCTGGGTGGTGTGGTGATCGC
CACGCAGGCGGGCCTGGTCG

Product: MFS transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MSNLTSARSSRFPPALLALTIGAFGIGTTEFVIMGLLQQVAADLGVSLSAAGLLISGYALGVFVGAPVLTLASARLPRKA
VLVGLMLIFTVGNVACALAPDYTSLMVARVLTSLAHGTFFGVGAVVATSLVPAERRASAISLMFAGLTVATLLGVPAGAW
LGLQLGWRATFWAVAAIGVLATSAVAVWVPAAAGAATPVSWRQEVAVLQRGQVLLALAITVVGYAGVFAVFAYIQPLLLQ
VTGFAQSTVSPVLLVFGVGMIVGNLLGGRLADRRPTAALLGSLAALVVVLGALGCVLHSKAAMVTFVGLLGVAAFATVAP
LQLRVLEHARGAG

Sequences:

>Translated_333_residues
MSNLTSARSSRFPPALLALTIGAFGIGTTEFVIMGLLQQVAADLGVSLSAAGLLISGYALGVFVGAPVLTLASARLPRKA
VLVGLMLIFTVGNVACALAPDYTSLMVARVLTSLAHGTFFGVGAVVATSLVPAERRASAISLMFAGLTVATLLGVPAGAW
LGLQLGWRATFWAVAAIGVLATSAVAVWVPAAAGAATPVSWRQEVAVLQRGQVLLALAITVVGYAGVFAVFAYIQPLLLQ
VTGFAQSTVSPVLLVFGVGMIVGNLLGGRLADRRPTAALLGSLAALVVVLGALGCVLHSKAAMVTFVGLLGVAAFATVAP
LQLRVLEHARGAG
>Mature_332_residues
SNLTSARSSRFPPALLALTIGAFGIGTTEFVIMGLLQQVAADLGVSLSAAGLLISGYALGVFVGAPVLTLASARLPRKAV
LVGLMLIFTVGNVACALAPDYTSLMVARVLTSLAHGTFFGVGAVVATSLVPAERRASAISLMFAGLTVATLLGVPAGAWL
GLQLGWRATFWAVAAIGVLATSAVAVWVPAAAGAATPVSWRQEVAVLQRGQVLLALAITVVGYAGVFAVFAYIQPLLLQV
TGFAQSTVSPVLLVFGVGMIVGNLLGGRLADRRPTAALLGSLAALVVVLGALGCVLHSKAAMVTFVGLLGVAAFATVAPL
QLRVLEHARGAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=317, Percent_Identity=47.3186119873817, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI1786595, Length=317, Percent_Identity=34.7003154574132, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1787808, Length=259, Percent_Identity=28.1853281853282, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI145693198, Length=265, Percent_Identity=29.0566037735849, Blast_Score=99, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 33649; Mature: 33517

Theoretical pI: Translated: 11.53; Mature: 11.53

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLTSARSSRFPPALLALTIGAFGIGTTEFVIMGLLQQVAADLGVSLSAAGLLISGYAL
CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GVFVGAPVLTLASARLPRKAVLVGLMLIFTVGNVACALAPDYTSLMVARVLTSLAHGTFF
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHH
GVGAVVATSLVPAERRASAISLMFAGLTVATLLGVPAGAWLGLQLGWRATFWAVAAIGVL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEECHHHHHHHHHHHHHH
ATSAVAVWVPAAAGAATPVSWRQEVAVLQRGQVLLALAITVVGYAGVFAVFAYIQPLLLQ
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTGFAQSTVSPVLLVFGVGMIVGNLLGGRLADRRPTAALLGSLAALVVVLGALGCVLHSK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAMVTFVGLLGVAAFATVAPLQLRVLEHARGAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNLTSARSSRFPPALLALTIGAFGIGTTEFVIMGLLQQVAADLGVSLSAAGLLISGYAL
CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]