| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yjl094C [H]
Identifier: 21243532
GI number: 21243532
Start: 3288652
End: 3289917
Strand: Reverse
Name: yjl094C [H]
Synonym: XAC2805
Alternate gene names: 21243532
Gene position: 3289917-3288652 (Counterclockwise)
Preceding gene: 21243533
Following gene: 21243529
Centisome position: 63.57
GC content: 64.14
Gene sequence:
>1266_bases ATGACCACTCCGCAGATGTCGGTGTACTTCTTTTTGCAGGCGGCCGCGATTTTGTTGGTATGCCGGCTGGTCGGCATGCT GGCCAAGCGCCTCGGGCAACCGCAGGTGGTGGGGGAAATGATTGCCGGCGTGATGCTGGGGCCCTCGTTGTTCGGCTTGC TGGCGCCAGGCGTGCAGGCGGCCCTGTTCCCCAAGCAGACCATGGACGTGCTGTATGTGTTCGCGCAGTTCGGCGTGGGC CTGTACATGTTCCTGGTCGGAACCGATTTCCGCGGCGACCACTTTCGCGCGCGCTATCGCAGCGCCATGAGCGTGTCGAT GGCGGGCATCGCGGTGCCGTTCCTGCTGGCGTTCGCCATGTGCCCGTGGCTGATCAACGTGGATGGCCTGTTTTCGGAAA AGGCCAAGCTGACCGAAGCGTCGTTGTTCCTGGGCGCGGCGATCGCGATCACCGCCTTTCCGATGCTGGCGCGCATCATC CACGAACGCGGTCTGACCAATAGCCCGTTGGGCACCTTGGCGCTGACCGCTGGCGCGTTCGACGATGCCGCAGCGTGGTG CATTCTGGCCGTGGTGCTGGCCAGTTTCGGCGGCAGTTGGGGCAGTGCCTACCTGGCCATCGGCGGCGGCATCGGCTATG CGGTCTTCATGATTTTCGTCGGCCGGCATCTGCTCAAGCGGCTGGCCGATCATGTGGTGCCCGGCCAGCCGCTGAGCAAC AGTGTCCTGGCGGTCGTGCTGATCCTGTTCTGCACCAGCGCCTGGGCGATGGATGCGATCGGCATCCATGCAGTGTTCGG CGGTTTCCTGCTCGGTGTCTGCCTGCCCAGGGGCGCACTGACCGAGAAGCTGCGCGAGATGCTGCAGCCGTTCGTCGTGG TGCTGTTGCTGCCGATGTTCTTCACCTATTCGGGCTTGAAAACCCAGCTCAGCGTGTTGCTGCAGCCGCAGATCATGCTG GCCGGCGTGGCGATCCTGGCCGCATCGTTCATCGGCAAGGGTGTGGCCTGCTGGGCCGCGGCGCGTGCCACCGGCGAGAA CAACCGCGACGCCATGGCGATCGGTTCGCTGATGAATGCACGCGGGTTGATGGAGCTGATCATCATCAACATCGGCTTGC AGGCGGGTGTAATCGAGCAGGGCCTGTTCTCGGTGCTGGTGCTGATGGCGATCCTGTCCACGCTGATGGCCACGCCGTTG TTCAACTGGATCATGCGCCGCCACGCCCATGTGAGCGACGCGGTGCCGAGCCTGCAGTCGCGGTGA
Upstream 100 bases:
>100_bases AGCGCGCAGGTGGGCTTGGATCGCCACGGCAGCCGCACGCTATCGAAGTGCGGCAGCTCCGGTTACGATCTGCGCACTTT TCACGGATGTTGCCGCACGC
Downstream 100 bases:
>100_bases TCGGTTGCGCAACTGCCCGCAGGTGCGGGCAGTTGCGTCGGCGTGCGCGTGGCCGGGCGTTGCGTCAACGCCCCAGCGGT AACTGCACGCTGGCCAGCAG
Product: cation:proton antiporter
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MTTPQMSVYFFLQAAAILLVCRLVGMLAKRLGQPQVVGEMIAGVMLGPSLFGLLAPGVQAALFPKQTMDVLYVFAQFGVG LYMFLVGTDFRGDHFRARYRSAMSVSMAGIAVPFLLAFAMCPWLINVDGLFSEKAKLTEASLFLGAAIAITAFPMLARII HERGLTNSPLGTLALTAGAFDDAAAWCILAVVLASFGGSWGSAYLAIGGGIGYAVFMIFVGRHLLKRLADHVVPGQPLSN SVLAVVLILFCTSAWAMDAIGIHAVFGGFLLGVCLPRGALTEKLREMLQPFVVVLLLPMFFTYSGLKTQLSVLLQPQIML AGVAILAASFIGKGVACWAAARATGENNRDAMAIGSLMNARGLMELIIINIGLQAGVIEQGLFSVLVLMAILSTLMATPL FNWIMRRHAHVSDAVPSLQSR
Sequences:
>Translated_421_residues MTTPQMSVYFFLQAAAILLVCRLVGMLAKRLGQPQVVGEMIAGVMLGPSLFGLLAPGVQAALFPKQTMDVLYVFAQFGVG LYMFLVGTDFRGDHFRARYRSAMSVSMAGIAVPFLLAFAMCPWLINVDGLFSEKAKLTEASLFLGAAIAITAFPMLARII HERGLTNSPLGTLALTAGAFDDAAAWCILAVVLASFGGSWGSAYLAIGGGIGYAVFMIFVGRHLLKRLADHVVPGQPLSN SVLAVVLILFCTSAWAMDAIGIHAVFGGFLLGVCLPRGALTEKLREMLQPFVVVLLLPMFFTYSGLKTQLSVLLQPQIML AGVAILAASFIGKGVACWAAARATGENNRDAMAIGSLMNARGLMELIIINIGLQAGVIEQGLFSVLVLMAILSTLMATPL FNWIMRRHAHVSDAVPSLQSR >Mature_420_residues TTPQMSVYFFLQAAAILLVCRLVGMLAKRLGQPQVVGEMIAGVMLGPSLFGLLAPGVQAALFPKQTMDVLYVFAQFGVGL YMFLVGTDFRGDHFRARYRSAMSVSMAGIAVPFLLAFAMCPWLINVDGLFSEKAKLTEASLFLGAAIAITAFPMLARIIH ERGLTNSPLGTLALTAGAFDDAAAWCILAVVLASFGGSWGSAYLAIGGGIGYAVFMIFVGRHLLKRLADHVVPGQPLSNS VLAVVLILFCTSAWAMDAIGIHAVFGGFLLGVCLPRGALTEKLREMLQPFVVVLLLPMFFTYSGLKTQLSVLLQPQIMLA GVAILAASFIGKGVACWAAARATGENNRDAMAIGSLMNARGLMELIIINIGLQAGVIEQGLFSVLVLMAILSTLMATPLF NWIMRRHAHVSDAVPSLQSR
Specific function: This is a Na(+)/H(+) antiporter. It can mediate sodium uptake when a transmembrane pH gradient is applied [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family [H]
Homologues:
Organism=Escherichia coli, GI1789749, Length=387, Percent_Identity=24.2894056847545, Blast_Score=62, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322367, Length=405, Percent_Identity=30.8641975308642, Blast_Score=181, Evalue=2e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 44890; Mature: 44759
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPQMSVYFFLQAAAILLVCRLVGMLAKRLGQPQVVGEMIAGVMLGPSLFGLLAPGVQA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH ALFPKQTMDVLYVFAQFGVGLYMFLVGTDFRGDHFRARYRSAMSVSMAGIAVPFLLAFAM HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CPWLINVDGLFSEKAKLTEASLFLGAAIAITAFPMLARIIHERGLTNSPLGTLALTAGAF HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCC DDAAAWCILAVVLASFGGSWGSAYLAIGGGIGYAVFMIFVGRHLLKRLADHVVPGQPLSN HHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH SVLAVVLILFCTSAWAMDAIGIHAVFGGFLLGVCLPRGALTEKLREMLQPFVVVLLLPMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH FTYSGLKTQLSVLLQPQIMLAGVAILAASFIGKGVACWAAARATGENNRDAMAIGSLMNA HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHH RGLMELIIINIGLQAGVIEQGLFSVLVLMAILSTLMATPLFNWIMRRHAHVSDAVPSLQS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC R C >Mature Secondary Structure TTPQMSVYFFLQAAAILLVCRLVGMLAKRLGQPQVVGEMIAGVMLGPSLFGLLAPGVQA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH ALFPKQTMDVLYVFAQFGVGLYMFLVGTDFRGDHFRARYRSAMSVSMAGIAVPFLLAFAM HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CPWLINVDGLFSEKAKLTEASLFLGAAIAITAFPMLARIIHERGLTNSPLGTLALTAGAF HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCC DDAAAWCILAVVLASFGGSWGSAYLAIGGGIGYAVFMIFVGRHLLKRLADHVVPGQPLSN HHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH SVLAVVLILFCTSAWAMDAIGIHAVFGGFLLGVCLPRGALTEKLREMLQPFVVVLLLPMF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH FTYSGLKTQLSVLLQPQIMLAGVAILAASFIGKGVACWAAARATGENNRDAMAIGSLMNA HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHH RGLMELIIINIGLQAGVIEQGLFSVLVLMAILSTLMATPLFNWIMRRHAHVSDAVPSLQS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1312090; 1325937 [H]