| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is flp [H]
Identifier: 21243533
GI number: 21243533
Start: 3290063
End: 3291658
Strand: Reverse
Name: flp [H]
Synonym: XAC2806
Alternate gene names: 21243533
Gene position: 3291658-3290063 (Counterclockwise)
Preceding gene: 21243534
Following gene: 21243532
Centisome position: 63.6
GC content: 64.97
Gene sequence:
>1596_bases GTGACCTTGAACCGATGGCTGAGTGGGGGCGTGCTGATGGTGGCAAGCTTGGCGACGACAACGCACGCGGCCGAACTCCC CGCCGGCATGCAGCAGTTCGATGCGCAGATGGAACGCGTGCGCAAGCAGTTCGACGTGCCCGGTATTGCGGTGGCCATCG TCAAGGACGGCCAGGTGGTGCTGGAGCGCGGCTACGGCGTGCGCGAGACCGGCAAGCCCGCGCCGGTGCAGGCCGACACG TTGTTTGCGATTGCCTCCAATACCAAGGCGTTCACTGCCGCATCGCTGTCGATTCTGGCCGATGAAGGCAAGCTCTCGCT CGATGACAAGGTCATCGACCATCTGCCGTGGTTCCGCATGTCCGACCCGTATGTGAGCGGGCAGATGCGCATCCGCGATC TGCTGGCGCACCGCAGCGGCCTGAGCCTGGGTGCAGGCGATTTATTGTTCTGGCCCAGCACCAGCTACACCACCGAAGAG GTCGTGCAGCGCCTGGCCAAGGTGCCGCTGAAGGGCGGTTTTCGCGACCGCTATGCGTACGACAACATCCTGTACGCAGT CGCCCAGAAGGTGATCGAGCAGGTCTCCGGGCAGAGTTACGCGGCATTTCTGCAGCAACGCATCTTCGACCCGGTGGGCA TGCGCGGCACGCGCTTCAACGCCGACCATCTGCAGCCCGGCGATCACGCCGCAGTCGGGCATGCCAAGTACGACTTTACC GAGCTGCGCACGGTGGCGCCGCTGACCTGGTCCAACAACTCCGGCGCCGGCGGCATCTATTCCAGCGTGCACGACATGGC GCTGTGGATGAATGTGCAACTGGCCGGCGGCATCCTGCCCGATGGCAAACCCCTGTTCAGCGCCAAGCGTCAGCAGGAAA TGTGGTCGATGATCACGCCGATCCCGATCGGCGAGGTGCAGGTGCCCGAGCTTGCCGCGGCGCGGCCGAACTTCGCCGGC TACGGTGAGGGCTGGAGCCTGAGCGATTACCGCGGCCATCGCATGGTCTGGCACACCGGCGGCTGGCCCGGCATGGTGTC GCGCCTGACGCTGCTGCCGGATCAGAAGCTGGGTGTGGTGGTGTTGACCAATCAGGAGGTGGGCGCTGCGTTCAATGCGG TGACCTTCCAGGTGCTGGATGCGTTCTTGCAGGTGCCGTCCACCGATTGGACCGCCGCTTACGCCAAGCTGGTGGAGAAG GCCGATAGCGAGGCGGACGCGAGTTGGAACAAGCACCAGGACGCGCGTGCGTCGCGGTCCACGCCGTCGTTGCCGCTGCG CAGTTACGCGGCCACCTATCGCGACCCCTGGTACGGCGATGTGGCGATTGTGCAGGACGGCAAGCGGCTGCGCCTGCAGT TCGCCAGGACCGCCCAGTTGGTGGGCACGCTGGAGCATTGGCAGCACGACAGCTTCATCGTGCGCTGGGACGACCGCTCC TTGAATGCCGATGCCTTCGTCAATTTCGCGCTGACCCCGGATGGCGCGGTGCGCGAGATGCGCATGGAGCCGATTTCGCC GTTGACCGATTTCAGCTTCGATTTCCAGGACCTGGTGCTGACGCCGGTGCCGATGCCGACCGCTGCGGGCAAATGA
Upstream 100 bases:
>100_bases TGGCTGTACGCCGATGCCAATGGCGTGCTGGTGGCGCCGCAACCGTTGGCGCTGGATGGCGCCGGCGGATCGATCTGACC AATAACCTGAAGGTGATGCA
Downstream 100 bases:
>100_bases TGCAGGCAAGCGCGGATGACCTTCGCGCTGCGCCTGGCGGGCCCAAGCGCGCAGGTGGGCTTGGATCGCCACGGCAGCCG CACGCTATCGAAGTGCGGCA
Product: beta-lactamase
Products: NA
Alternate protein names: FmtA-like protein [H]
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MTLNRWLSGGVLMVASLATTTHAAELPAGMQQFDAQMERVRKQFDVPGIAVAIVKDGQVVLERGYGVRETGKPAPVQADT LFAIASNTKAFTAASLSILADEGKLSLDDKVIDHLPWFRMSDPYVSGQMRIRDLLAHRSGLSLGAGDLLFWPSTSYTTEE VVQRLAKVPLKGGFRDRYAYDNILYAVAQKVIEQVSGQSYAAFLQQRIFDPVGMRGTRFNADHLQPGDHAAVGHAKYDFT ELRTVAPLTWSNNSGAGGIYSSVHDMALWMNVQLAGGILPDGKPLFSAKRQQEMWSMITPIPIGEVQVPELAAARPNFAG YGEGWSLSDYRGHRMVWHTGGWPGMVSRLTLLPDQKLGVVVLTNQEVGAAFNAVTFQVLDAFLQVPSTDWTAAYAKLVEK ADSEADASWNKHQDARASRSTPSLPLRSYAATYRDPWYGDVAIVQDGKRLRLQFARTAQLVGTLEHWQHDSFIVRWDDRS LNADAFVNFALTPDGAVREMRMEPISPLTDFSFDFQDLVLTPVPMPTAAGK
Sequences:
>Translated_531_residues MTLNRWLSGGVLMVASLATTTHAAELPAGMQQFDAQMERVRKQFDVPGIAVAIVKDGQVVLERGYGVRETGKPAPVQADT LFAIASNTKAFTAASLSILADEGKLSLDDKVIDHLPWFRMSDPYVSGQMRIRDLLAHRSGLSLGAGDLLFWPSTSYTTEE VVQRLAKVPLKGGFRDRYAYDNILYAVAQKVIEQVSGQSYAAFLQQRIFDPVGMRGTRFNADHLQPGDHAAVGHAKYDFT ELRTVAPLTWSNNSGAGGIYSSVHDMALWMNVQLAGGILPDGKPLFSAKRQQEMWSMITPIPIGEVQVPELAAARPNFAG YGEGWSLSDYRGHRMVWHTGGWPGMVSRLTLLPDQKLGVVVLTNQEVGAAFNAVTFQVLDAFLQVPSTDWTAAYAKLVEK ADSEADASWNKHQDARASRSTPSLPLRSYAATYRDPWYGDVAIVQDGKRLRLQFARTAQLVGTLEHWQHDSFIVRWDDRS LNADAFVNFALTPDGAVREMRMEPISPLTDFSFDFQDLVLTPVPMPTAAGK >Mature_530_residues TLNRWLSGGVLMVASLATTTHAAELPAGMQQFDAQMERVRKQFDVPGIAVAIVKDGQVVLERGYGVRETGKPAPVQADTL FAIASNTKAFTAASLSILADEGKLSLDDKVIDHLPWFRMSDPYVSGQMRIRDLLAHRSGLSLGAGDLLFWPSTSYTTEEV VQRLAKVPLKGGFRDRYAYDNILYAVAQKVIEQVSGQSYAAFLQQRIFDPVGMRGTRFNADHLQPGDHAAVGHAKYDFTE LRTVAPLTWSNNSGAGGIYSSVHDMALWMNVQLAGGILPDGKPLFSAKRQQEMWSMITPIPIGEVQVPELAAARPNFAGY GEGWSLSDYRGHRMVWHTGGWPGMVSRLTLLPDQKLGVVVLTNQEVGAAFNAVTFQVLDAFLQVPSTDWTAAYAKLVEKA DSEADASWNKHQDARASRSTPSLPLRSYAATYRDPWYGDVAIVQDGKRLRLQFARTAQLVGTLEHWQHDSFIVRWDDRSL NADAFVNFALTPDGAVREMRMEPISPLTDFSFDFQDLVLTPVPMPTAAGK
Specific function: Its precise function is unknown. Has no penicillin- binding activity and is not involved in methicillin resistance [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082101, Length=294, Percent_Identity=27.5510204081633, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI1786574, Length=380, Percent_Identity=25.5263157894737, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17550934, Length=353, Percent_Identity=25.2124645892351, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17565630, Length=206, Percent_Identity=28.6407766990291, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 58549; Mature: 58418
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNRWLSGGVLMVASLATTTHAAELPAGMQQFDAQMERVRKQFDVPGIAVAIVKDGQVV CCCHHHHCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEE LERGYGVRETGKPAPVQADTLFAIASNTKAFTAASLSILADEGKLSLDDKVIDHLPWFRM EECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCHHHHHHCCCCCC SDPYVSGQMRIRDLLAHRSGLSLGAGDLLFWPSTSYTTEEVVQRLAKVPLKGGFRDRYAY CCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHH DNILYAVAQKVIEQVSGQSYAAFLQQRIFDPVGMRGTRFNADHLQPGDHAAVGHAKYDFT HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH ELRTVAPLTWSNNSGAGGIYSSVHDMALWMNVQLAGGILPDGKPLFSAKRQQEMWSMITP HHHEECEEEECCCCCCCCHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC IPIGEVQVPELAAARPNFAGYGEGWSLSDYRGHRMVWHTGGWPGMVSRLTLLPDQKLGVV CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHEEECCCCCCCEE VLTNQEVGAAFNAVTFQVLDAFLQVPSTDWTAAYAKLVEKADSEADASWNKHQDARASRS EEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCC TPSLPLRSYAATYRDPWYGDVAIVQDGKRLRLQFARTAQLVGTLEHWQHDSFIVRWDDRS CCCCCHHHHHHHCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCC LNADAFVNFALTPDGAVREMRMEPISPLTDFSFDFQDLVLTPVPMPTAAGK CCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCCCCCCC >Mature Secondary Structure TLNRWLSGGVLMVASLATTTHAAELPAGMQQFDAQMERVRKQFDVPGIAVAIVKDGQVV CCHHHHCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEE LERGYGVRETGKPAPVQADTLFAIASNTKAFTAASLSILADEGKLSLDDKVIDHLPWFRM EECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCHHHHHHCCCCCC SDPYVSGQMRIRDLLAHRSGLSLGAGDLLFWPSTSYTTEEVVQRLAKVPLKGGFRDRYAY CCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHH DNILYAVAQKVIEQVSGQSYAAFLQQRIFDPVGMRGTRFNADHLQPGDHAAVGHAKYDFT HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH ELRTVAPLTWSNNSGAGGIYSSVHDMALWMNVQLAGGILPDGKPLFSAKRQQEMWSMITP HHHEECEEEECCCCCCCCHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC IPIGEVQVPELAAARPNFAGYGEGWSLSDYRGHRMVWHTGGWPGMVSRLTLLPDQKLGVV CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHEEECCCCCCCEE VLTNQEVGAAFNAVTFQVLDAFLQVPSTDWTAAYAKLVEKADSEADASWNKHQDARASRS EEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCC TPSLPLRSYAATYRDPWYGDVAIVQDGKRLRLQFARTAQLVGTLEHWQHDSFIVRWDDRS CCCCCHHHHHHHCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCC LNADAFVNFALTPDGAVREMRMEPISPLTDFSFDFQDLVLTPVPMPTAAGK CCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA