| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243383
Identifier: 21243383
GI number: 21243383
Start: 3114357
End: 3114788
Strand: Reverse
Name: 21243383
Synonym: XAC2654
Alternate gene names: NA
Gene position: 3114788-3114357 (Counterclockwise)
Preceding gene: 21243390
Following gene: 21243371
Centisome position: 60.18
GC content: 48.15
Gene sequence:
>432_bases ATGGGAATAGTCATGAAACATAAAATTTTACTAGGCTTTAGTGTCGCAGCAATCGGTTTGCTCTTTTCTTCGGCCGCATT TGCAGACATCGGTACAATTAGTTTTTATGGAAATAACGCTCGTCGTCCCGCAGACCTTGTCCAGGGTTGCAATGTACCGG AAGATCAAGTCAGCGGGCGAAACTACCAGGTAGTGACGGTTTCGGATGGTCTGTGGGATAACGGTGCTTCTTGTGGGAGG CGCTATCGCATGCGCTGCATTTCTACGCCAGTTAAGCATTCCTGCACTGCCAGTACAATTGACGTAATCGTTGTTGGCCG TTGCCCCAATGGCAGGTGTACGGTTGGCGGGAGGGATGTAACTATGAAAATTGCATTCAACCGATATTCGTTGTTGGTCC AAGCAAGAACAGCGCCCTGGGCAAATATTTAA
Upstream 100 bases:
>100_bases AATGATGGTTCCCCCCCCCAAAAAAAAAATCGCAAACAGCAACAAATTTTCGCATATTTGATGCAGCTGAGTTGCGCGAC CTGAGAGCCTTTACGTCCAC
Downstream 100 bases:
>100_bases TATATTCAAATATAAATAAAAATCACTCAAAATCTATTTTTAAAAAATGGGCCGTCGATGTTATGTGCGACTGCGATCCC ACCGCAGCATTTTGCTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MGIVMKHKILLGFSVAAIGLLFSSAAFADIGTISFYGNNARRPADLVQGCNVPEDQVSGRNYQVVTVSDGLWDNGASCGR RYRMRCISTPVKHSCTASTIDVIVVGRCPNGRCTVGGRDVTMKIAFNRYSLLVQARTAPWANI
Sequences:
>Translated_143_residues MGIVMKHKILLGFSVAAIGLLFSSAAFADIGTISFYGNNARRPADLVQGCNVPEDQVSGRNYQVVTVSDGLWDNGASCGR RYRMRCISTPVKHSCTASTIDVIVVGRCPNGRCTVGGRDVTMKIAFNRYSLLVQARTAPWANI >Mature_142_residues GIVMKHKILLGFSVAAIGLLFSSAAFADIGTISFYGNNARRPADLVQGCNVPEDQVSGRNYQVVTVSDGLWDNGASCGRR YRMRCISTPVKHSCTASTIDVIVVGRCPNGRCTVGGRDVTMKIAFNRYSLLVQARTAPWANI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15443; Mature: 15312
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS50842 EXPANSIN_EG45
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIVMKHKILLGFSVAAIGLLFSSAAFADIGTISFYGNNARRPADLVQGCNVPEDQVSGR CCEEEEEHEEHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHCCCCCHHHHCCC NYQVVTVSDGLWDNGASCGRRYRMRCISTPVKHSCTASTIDVIVVGRCPNGRCTVGGRDV CEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCEE TMKIAFNRYSLLVQARTAPWANI EEEEEECEEEEEEEECCCCCCCC >Mature Secondary Structure GIVMKHKILLGFSVAAIGLLFSSAAFADIGTISFYGNNARRPADLVQGCNVPEDQVSGR CEEEEEHEEHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHCCCCCHHHHCCC NYQVVTVSDGLWDNGASCGRRYRMRCISTPVKHSCTASTIDVIVVGRCPNGRCTVGGRDV CEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCEE TMKIAFNRYSLLVQARTAPWANI EEEEEECEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA