| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is P
Identifier: 21243371
GI number: 21243371
Start: 3106285
End: 3108069
Strand: Reverse
Name: P
Synonym: XAC2642
Alternate gene names: NA
Gene position: 3108069-3106285 (Counterclockwise)
Preceding gene: 21243383
Following gene: 21243370
Centisome position: 60.05
GC content: 62.97
Gene sequence:
>1785_bases GTGTGCTGCACCCTGATCGGCATGCAAAGCGTTGCCACCCAGCTCCCGATGGACACCCGCAGACAGGCCAAGTTCCTGTA CTGGATGGGATGGCGCGTGATCGAAATTGCGCAGGCCATCGGCGAGAACGAGAAGACTGTACACAGCTGGAAGTCGCGTG ACGAGTGGGATCGCGCAGATAACGTTGAGCGCATCGGTGGTGCACTGGAAGCGCGCCTGGTCGTGCTGATCATGAAGCCG GAAAAATCCGGCGGTGACTTCAAGGAAATTGATCTGCTGCATCGGCAGTTGGAGCGCCAGGCGCGCATCCAGCGCTACCA AGGTGGCGGCAACGAGGCCGATCTGAACCCGGCTGTTGCCAATCGCAACGCCGCGCCGAAGAAGAAGCCCAAGCGCAACG ACTTCACCGAGGAACAGGTCGAGCAGCTGACCACGGCATTTGTCGACGGCTGCTTCGATTATCAGCGCGATTGGTATCGG GCAGGCAACGAGCGCACCCGCATCATTCTCAAGTCGCGTCAGATCGGTGCAACGTTTTACTTCGCCCGCGAGGCGCTGAT CGATGCGCTCACCACCGGGCGCAATCAGATCTTCCTCAGTGCGTCCAAGGCACAGGCGCATCTGTTCCGTGGCTACATGC AGCAGTTCGTGCGCGAGACGATCGACGAGACGCTCTCCGGCGGCGACAGCATTGTGTTTCCCAACGGCGCCGAGCTGTTC TTCCTCGGCACCAATGCACGCACCGCGCAGGGCTACCACGGCAATTTCTACTTCGACGAGTTCTTCTGGACCTATGGGTT CAACGAATTGAACAAGGTCGCCAGCGGCATGGCGATGCACAAGAAGTGGCGCAAGACTTACTTCAGCACGCCATCGAGCA TGGCGCATGAGGCCTACACGTTCTGGACCGGCGAGCGCCGCAACAAGGGCAAGCCGGCTGCGCAGCGGATCCAGATCGAT GTGTCGCATGACGCGCTCGCTGGCGGGCGCCGTTGCCAGGACCGCGCCTGGCGGCAGATCGTCAACATCCTCGACGCCCA GCGCCGTGGCTGCGACCTGTTCGATATCGAGGAACTGCGCGAGGAGTACAGCCCGGACGCCTTCGCCAATCTGCTGATGT GCGACTTCGTCGACGACGGCGCCAGCATCTTCCCGCTGGCGATGCTGCAGCCGTGCATGGTCGACAGCTGGGTGGAGTGG GGTCAGGACTACAAACCGTTCGCCGCGCGCCCCTACGGCGATCGCGCCGTGTGGATCGGCTACGACCCAGCTGAAACCGG CGACACTGCTGGCCTGGTCGTGCTGGCGCCACCGCAGCAGCCTGGCGGCAAGTTCCGGCTGCTGGAGCGCATCCAATTCC GCGGCATGGACTTTGCCAAGCAGGCCGCCGAAATCGAGCGCATCACGCGCCGCTACTGGGTGACCTACATCGGCATCGAC ACCACCGGCATGGGCAGCGGCGTGGCGCAGCTGGTGAAGCAGTTCTTCCCGAATCTGGTCACCTTCAGCTACTCGCCGGA GGTCAAGACGCGGCTGGTGCTCAAGGCCTTCGACGTCATCCATAACGAACGGCTGGAGTTCGATGCCGGCTGGACCGACG TGGCGCAGTCGTTGATGGCCATCCGCAAGACGATGACCGCCAGCGGCCGGCAATCCACCTTCACCGCTGGCCGCTCGGAA GAGACCGGCCACGCGGACCTGGCGTGGGCGCTGTTCCACGCGCTGCAGAACGAACCGCTGGAAGGGCGCACCGCGCGCAA CTCCGGCTTCATGGAGATCTCTTGA
Upstream 100 bases:
>100_bases CGTTTGCGATGACCCATGGTCAAACGCAACGCATAGCGCAGCAACGAAAACACCGTGTAAACAAGGTGATTACGCGTTGC TCAACTGTCGGGATTAAGAG
Downstream 100 bases:
>100_bases TGTTGACCGACCAGCTGCCCGCCACCGCGCCTGCAGCGCCCGCCGTGCCTACACGCGCCGAGGCGTTTACCTTTGGCGAC CCGACACCGGTGCTCGATGG
Product: phage-related terminase
Products: NA
Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Phage-Related Terminase ATPase Subunit; Terminase Related Protein; Bacteriophage Terminase; Orf16-Like Phage Protein; Phage Terminase ATPase Subunit P; Mu-Like Prophage FluMu Protein Gp; Prophage; ATPase Subunit Of Terminase; Phage Gene; Terminase Subunit; Phage P2 Terminase ATPase Subunit GpP-Like Protein; Bacteriophage Terminase Large Subunit; Prophage Large Terminase Protein; Fels-2 Prophage Protein; Phage Terminase Subunit GpP; Terminase Large Subunit; DNA-Dependent ATPase Terminase Subunit; Terminase ATPase Subunit Bacteriophage Origin; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage-Related Terminase
Number of amino acids: Translated: 594; Mature: 594
Protein sequence:
>594_residues MCCTLIGMQSVATQLPMDTRRQAKFLYWMGWRVIEIAQAIGENEKTVHSWKSRDEWDRADNVERIGGALEARLVVLIMKP EKSGGDFKEIDLLHRQLERQARIQRYQGGGNEADLNPAVANRNAAPKKKPKRNDFTEEQVEQLTTAFVDGCFDYQRDWYR AGNERTRIILKSRQIGATFYFAREALIDALTTGRNQIFLSASKAQAHLFRGYMQQFVRETIDETLSGGDSIVFPNGAELF FLGTNARTAQGYHGNFYFDEFFWTYGFNELNKVASGMAMHKKWRKTYFSTPSSMAHEAYTFWTGERRNKGKPAAQRIQID VSHDALAGGRRCQDRAWRQIVNILDAQRRGCDLFDIEELREEYSPDAFANLLMCDFVDDGASIFPLAMLQPCMVDSWVEW GQDYKPFAARPYGDRAVWIGYDPAETGDTAGLVVLAPPQQPGGKFRLLERIQFRGMDFAKQAAEIERITRRYWVTYIGID TTGMGSGVAQLVKQFFPNLVTFSYSPEVKTRLVLKAFDVIHNERLEFDAGWTDVAQSLMAIRKTMTASGRQSTFTAGRSE ETGHADLAWALFHALQNEPLEGRTARNSGFMEIS
Sequences:
>Translated_594_residues MCCTLIGMQSVATQLPMDTRRQAKFLYWMGWRVIEIAQAIGENEKTVHSWKSRDEWDRADNVERIGGALEARLVVLIMKP EKSGGDFKEIDLLHRQLERQARIQRYQGGGNEADLNPAVANRNAAPKKKPKRNDFTEEQVEQLTTAFVDGCFDYQRDWYR AGNERTRIILKSRQIGATFYFAREALIDALTTGRNQIFLSASKAQAHLFRGYMQQFVRETIDETLSGGDSIVFPNGAELF FLGTNARTAQGYHGNFYFDEFFWTYGFNELNKVASGMAMHKKWRKTYFSTPSSMAHEAYTFWTGERRNKGKPAAQRIQID VSHDALAGGRRCQDRAWRQIVNILDAQRRGCDLFDIEELREEYSPDAFANLLMCDFVDDGASIFPLAMLQPCMVDSWVEW GQDYKPFAARPYGDRAVWIGYDPAETGDTAGLVVLAPPQQPGGKFRLLERIQFRGMDFAKQAAEIERITRRYWVTYIGID TTGMGSGVAQLVKQFFPNLVTFSYSPEVKTRLVLKAFDVIHNERLEFDAGWTDVAQSLMAIRKTMTASGRQSTFTAGRSE ETGHADLAWALFHALQNEPLEGRTARNSGFMEIS >Mature_594_residues MCCTLIGMQSVATQLPMDTRRQAKFLYWMGWRVIEIAQAIGENEKTVHSWKSRDEWDRADNVERIGGALEARLVVLIMKP EKSGGDFKEIDLLHRQLERQARIQRYQGGGNEADLNPAVANRNAAPKKKPKRNDFTEEQVEQLTTAFVDGCFDYQRDWYR AGNERTRIILKSRQIGATFYFAREALIDALTTGRNQIFLSASKAQAHLFRGYMQQFVRETIDETLSGGDSIVFPNGAELF FLGTNARTAQGYHGNFYFDEFFWTYGFNELNKVASGMAMHKKWRKTYFSTPSSMAHEAYTFWTGERRNKGKPAAQRIQID VSHDALAGGRRCQDRAWRQIVNILDAQRRGCDLFDIEELREEYSPDAFANLLMCDFVDDGASIFPLAMLQPCMVDSWVEW GQDYKPFAARPYGDRAVWIGYDPAETGDTAGLVVLAPPQQPGGKFRLLERIQFRGMDFAKQAAEIERITRRYWVTYIGID TTGMGSGVAQLVKQFFPNLVTFSYSPEVKTRLVLKAFDVIHNERLEFDAGWTDVAQSLMAIRKTMTASGRQSTFTAGRSE ETGHADLAWALFHALQNEPLEGRTARNSGFMEIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67646; Mature: 67646
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCCTLIGMQSVATQLPMDTRRQAKFLYWMGWRVIEIAQAIGENEKTVHSWKSRDEWDRAD CEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHC NVERIGGALEARLVVLIMKPEKSGGDFKEIDLLHRQLERQARIQRYQGGGNEADLNPAVA CHHHHCCHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHC NRNAAPKKKPKRNDFTEEQVEQLTTAFVDGCFDYQRDWYRAGNERTRIILKSRQIGATFY CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH FAREALIDALTTGRNQIFLSASKAQAHLFRGYMQQFVRETIDETLSGGDSIVFPNGAELF HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEE FLGTNARTAQGYHGNFYFDEFFWTYGFNELNKVASGMAMHKKWRKTYFSTPSSMAHEAYT EEECCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEE FWTGERRNKGKPAAQRIQIDVSHDALAGGRRCQDRAWRQIVNILDAQRRGCDLFDIEELR EECCCCCCCCCCCHHEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH EEYSPDAFANLLMCDFVDDGASIFPLAMLQPCMVDSWVEWGQDYKPFAARPYGDRAVWIG HHHCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE YDPAETGDTAGLVVLAPPQQPGGKFRLLERIQFRGMDFAKQAAEIERITRRYWVTYIGID CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEECC TTGMGSGVAQLVKQFFPNLVTFSYSPEVKTRLVLKAFDVIHNERLEFDAGWTDVAQSLMA CCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH IRKTMTASGRQSTFTAGRSEETGHADLAWALFHALQNEPLEGRTARNSGFMEIS HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC >Mature Secondary Structure MCCTLIGMQSVATQLPMDTRRQAKFLYWMGWRVIEIAQAIGENEKTVHSWKSRDEWDRAD CEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHC NVERIGGALEARLVVLIMKPEKSGGDFKEIDLLHRQLERQARIQRYQGGGNEADLNPAVA CHHHHCCHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHC NRNAAPKKKPKRNDFTEEQVEQLTTAFVDGCFDYQRDWYRAGNERTRIILKSRQIGATFY CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH FAREALIDALTTGRNQIFLSASKAQAHLFRGYMQQFVRETIDETLSGGDSIVFPNGAELF HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEE FLGTNARTAQGYHGNFYFDEFFWTYGFNELNKVASGMAMHKKWRKTYFSTPSSMAHEAYT EEECCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEE FWTGERRNKGKPAAQRIQIDVSHDALAGGRRCQDRAWRQIVNILDAQRRGCDLFDIEELR EECCCCCCCCCCCHHEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH EEYSPDAFANLLMCDFVDDGASIFPLAMLQPCMVDSWVEWGQDYKPFAARPYGDRAVWIG HHHCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE YDPAETGDTAGLVVLAPPQQPGGKFRLLERIQFRGMDFAKQAAEIERITRRYWVTYIGID CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEECC TTGMGSGVAQLVKQFFPNLVTFSYSPEVKTRLVLKAFDVIHNERLEFDAGWTDVAQSLMA CCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH IRKTMTASGRQSTFTAGRSEETGHADLAWALFHALQNEPLEGRTARNSGFMEIS HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA